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FAPI-46

Alias: FAPI-46; 2374782-04-2; 59QC5DY68A; UNII-59QC5DY68A; (10-(2-(4-(3-((4-(((2-((2S)-2-Cyano-4,4-difluoro-1-pyrrolidinyl)-2-oxoethyl)amino)carbonyl)-6-quinolinyl)methylamino)propyl)-1-piperazinyl)-2-oxoethyl)-1,4,7,10-tetraazacyclododecane-1,4,7-triacetato(3-)-kappaN1,kappaN4,kappaN7,kappaN10)-; 2-[4,7-bis(carboxymethyl)-10-[2-[4-[3-[[4-[[2-[(2S)-2-cyano-4,4-difluoropyrrolidin-1-yl]-2-oxoethyl]carbamoyl]quinolin-6-yl]-methylamino]propyl]piperazin-1-yl]-2-oxoethyl]-1,4,7,10-tetrazacyclododec-1-yl]acetic acid; [10-[2-[4-[3-[[4-[[[2-[(2S)-2-Cyano-4,4-difluoro-1-pyrrolidinyl]-2-oxoethyl]amino]carbonyl]-6-quinolinyl]methylamino]propyl]-1-piperazinyl]-2-oxoethyl]-1,4,7,10-tetraazacyclododecane-1,4,7-triacetato(3-)-kappaN1,kappaN4,kappaN7,kappaN10]-; SCHEMBL21257093;
Cat No.:V51734 Purity: ≥98%
FAPI-46 is a quinoline-based activator of fibroblast-activated protein (FAP).
FAPI-46
FAPI-46 Chemical Structure CAS No.: 2374782-04-2
Product category: FAP
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description
FAPI-46 is a quinoline-based activator of fibroblast-activated protein (FAP). FAPI-46 has a higher tumor uptake rate and longer tumor accumulation time. FAPI-46 has oncological implications in a variety of different cancers.
Biological Activity I Assay Protocols (From Reference)
Targets
FAP (fibroblast activation protein)
ln Vitro
In HT-1080 cells producing human FAP, FAPI-46 (1–24 h) transiently binds to human FAP [1].
ln Vivo
FAPI-46 (iv) greatly improves the ratio of tumors to food in the liver, intestines and intestines, hence boosting image restoration in PET imaging [1].
Cell Assay
Cell Culture[1]
HT-1080 cells transfected with the human FAP gene, as well as murine FAP- and CD26-transfected human embryonic kidney cells, were cultivated in Dulbecco modified Eagle medium containing 10% fetal calf serum at 37°C/5% carbon dioxide.
For radioligand binding studies, cells were seeded in 6-well plates and cultivated for 48 h to a final confluence of about 80%–90% (1.2–2 million cells per well). The medium was replaced by 1 mL of fresh medium without fetal calf serum. The radiolabeled compound was added to the cell culture and incubated for different intervals ranging from 10 min to 24 h. Competition experiments were performed by simultaneous exposure to unlabeled (10−5 to 10−10 M) and radiolabeled compound for 60 min. Cell efflux was determined after incubation of the cells with the tracer for 60 min. Thereafter, the radioactive medium was removed, and the cells were washed and incubated with nonradioactive medium for 1, 2, 4, and 24 h. In all experiments, the cells were washed twice with 1 mL of phosphate-buffered saline, pH 7.4, and subsequently lysed with 1.4 mL of lysis buffer (0.3 m NaOH, 0.2% sodium dodecyl sulfate). Radioactivity was determined in a γ-counter, normalized to 1 million cells, and calculated as percentage applied dose. Each experiment was performed 3 times, and 3 repetitions per independent experiment were acquired.
Animal Protocol
Animal Studies[1]
For in vivo experiments, 8-wk-old BALB/c nu/nu mice were subcutaneously inoculated into the right trunk with 5 million HT-1080-FAP cells. When the size of the tumor reached approximately 1 cm3, the radiolabeled compound was injected via the tail vein (80 nmol/GBq for small-animal PET imaging; 200 nmol/GBq for organ distribution). In vivo blocking experiments were performed by adding 30 nmol of unlabeled FAPI to the radiolabeled compound directly before injection. For organ distribution, the animals (n = 3 for each time point) were killed 1, 4, 6, and 24 h after tracer administration. The distributed radioactivity was measured in all dissected organs and in blood using a γ-counter. The values are expressed as percentage injected dose per gram of tissue (%ID/g). PET imaging was performed using a small-animal PET scanner. Within the first 60 min, a dynamic scan was performed in list mode, followed by a static scan from 120 to 140 min after injection. Images were reconstructed iteratively using the 3-dimensional ordered-subset expectation maximization maximum a priori method and were converted to SUV images. For the dynamic data, 28 frames were reconstructed: 4 × 5 s, 4 × 10 s, 4 × 20 s, 4 × 60 s, 4 × 120 s, 6 × 300 s, and 2 × 470 s. Quantification was done using a region-of-interest technique and expressed as SUV. All animal experiments were conducted in compliance with the German animal protection laws (approval 35-91185.81/G-158/15).[1]
Clinical PET/CT Imaging[1]
Imaging of 8 patients was performed under the conditions of the updated Declaration of Helsinki, section 37 (unproven interventions in clinical practice) and in accordance with the German Pharmaceuticals Law, section 13 (2b), for medical reasons using 68Ga-FAPI-21 and -46, which were applied intravenously (20 nmol, 210–267 MBq for FAPI-21 and 216–242 MBq for FAPI-46). Imaging took place at 10 min, 1 h, and 3 h after tracer administration. The PET/CT scans were obtained with a Biograph mCT Flow PET/CT scanner using the following parameters: slice thickness of 5 mm, increment of 3–4 mm, soft-tissue reconstruction kernel, and CARE Dose. Immediately after CT scanning, a whole-body PET scan was acquired in 3 dimensions (matrix, 200 × 200) in FlowMotion with 0.7 cm/min. The emission data were corrected for randoms, scatter, and decay. Reconstruction was conducted with an ordered-subset expectation maximization algorithm with 2 iterations and 21 subsets and Gauss-filtered to a transaxial resolution of 5 mm in full width at half maximum. Attenuation was corrected using the low-dose nonenhanced CT data. SUVs were quantitatively assessed using a region-of-interest technique. The data were analyzed retrospectively with approval of the local ethics committee (approval S016/2018).
ADME/Pharmacokinetics
Serum stability [1]
The treated solvent-free radioactive compounds (177Lu-FAPI-21 and 177Lu-FAPI-46) were incubated with human serum at 37°C. After incubation for a certain period of time, samples were taken, proteins were removed by acetonitrile precipitation, centrifuged, and the supernatant was taken for radioactive high-performance liquid chromatography analysis. Supplementary Figure 1 shows that even after 24 hours, only the initial (radioactive) peak was detected, and no radioactive degradation products or free radioactivity were observed. These results indicate that neither substance was affected by the enzyme components of human serum.
References

[1]. Development of Fibroblast Activation Protein-Targeted Radiotracers with Improved Tumor Retention. J Nucl Med. 2019 Oct;60(10):1421-1429.

[2]. Targeting fibroblast activation protein (FAP): next generation PET radiotracers using squaramide coupled bifunctional DOTA and DATA 5m chelators. EJNMMI Radiopharm Chem. 2020 Jul 29;5(1):19.

Additional Infomation
Cancer-associated fibroblasts are an important component of the tumor stroma, present in over 90% of epithelial carcinomas. Overexpression of the serine protease fibroblast activating protein (FAP) enables inhibitor-based radiopharmaceuticals (FAPIs) to selectively target a variety of tumors. Among these compounds, FAPI-04 has recently been introduced as a therapeutic radiotracer and has demonstrated high uptake rates in various FAP-positive tumors in cancer patients. To achieve higher dose delivery and thus improve therapeutic efficacy, researchers designed several FAPI variants to further enhance the uptake and retention of these tracers in tumors. Methods: Novel quinoline-based radiotracers were synthesized using organic chemical methods, and radioligand binding assays were performed using HT-1080 cells expressing FAP. Based on their in vitro performance, small animal PET imaging and biodistribution studies were conducted on mice bearing HT-1080-FAP tumors. The most promising compounds were used for clinical PET imaging in 8 cancer patients. Results: Compared with FAPI-04, 11 of the 15 FAPI derivatives showed higher FAP binding capacity in vitro. Of these, seven compounds showed higher tumor uptake in tumor-bearing mice. In addition, most compounds showed an increased tumor/normal organ uptake ratio, resulting in higher contrast images. Notably, the tumor/blood, liver, muscle and intestine uptake ratios of the two radiotracers, FAPI-21 and FAPI-46, were significantly increased. In the first diagnostic application in cancer patients, both radiotracers showed high intratumoral uptake within 10 minutes after administration, but FAPI-21 showed higher uptake in the oral mucosa, salivary glands and thyroid gland. Conclusion: Chemical modification of the FAPI backbone enhances the FAP binding capacity and pharmacokinetic properties of most derivatives, resulting in high contrast images. In addition, higher doses of radioactive material can be delivered while minimizing damage to healthy tissues, which may improve therapeutic effects. [1]
Background: Fibroblast activating protein (FAP) is a proline-selective serine protease that is overexpressed in the tumor matrix and many other disease lesions characterized by tissue remodeling. In 2014, a highly efficient FAP inhibitor (designated UAMC1110) was developed, exhibiting low nanomolar affinity for FAP and high selectivity for related enzymes such as prolyl oligopeptidase (PREP) and dipeptidyl peptidases (DPPs): DPP4, DPP8/9, and DPP2. Recently, other research teams have used this inhibitor to prepare radiopharmaceuticals via bifunctional chelator-linker systems. This paper reports bifunctional chelators DATA5m and DOTA, containing squaric acid (SA) with UAMC1110 as the pharmacophore. We characterized the novel radiopharmaceuticals DOTA.SA.FAPi and DATA5m.SA.FAPi, and their non-radioactive derivatives, in vitro for inhibiting FAP and PREP activity, and conducted radiochemical studies using gallium-68. Furthermore, we performed preliminary in vivo animal experiments using [68Ga]Ga-DOTA.SA.FAPi and determined its in vitro biodistribution. The results showed that [68Ga]Ga-DOTA.SA.FAPi and [68Ga]Ga-DATA5m.SA.FAPi achieved radiochemical yields of over 97% within 10 minutes and maintained good stability for 2 hours. DOTA.SA.FAPi, DATA5m.SA.FAPi, and their natGa and natLu-labeled derivatives exhibited excellent affinity for fibroblast activation protein (FAP), with IC50 values as low as nanomolar levels (0.7–1.4 nM). Furthermore, all five compounds showed low affinity for the related protease PREP (higher IC50 values, 1.7–8.7 μM). In the HT-29 human colorectal cancer xenograft mouse model, the [68Ga]Ga-DOTA.SA.FAPi precursor was used in the first in vivo PET imaging animal experiment, demonstrating high accumulation in tumors (SUVmean = 0.75) with low background signal, indicating promising application prospects. In vitro biodistribution experiments showed that the highest uptake was observed in tumors (5.2% ID/g) 60 minutes after injection, while the overall uptake in healthy tissues was lower. Conclusion: This study synthesized and biochemically investigated novel PET radiotracers targeting fibroblast activation proteins. The key substructures of these novel compounds include a squamous amide linker derived from the squamous acid motif, a DOTA and DATA5m bifunctional chelator, and an FAP targeting moiety. In summary, these novel FAP ligands show promising potential for further research and development as well as for first-time human applications. [2]
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C41H57F2N11O9
Molecular Weight
885.97
Exact Mass
885.43
Elemental Analysis
C, 55.58; H, 6.49; F, 4.29; N, 17.39; O, 16.25
CAS #
2374782-04-2
PubChem CID
139400499
Appearance
Light yellow to yellow solid powder
Density
1.45±0.1 g/cm3(Predicted)
Boiling Point
1148.7±65.0 °C(Predicted)
LogP
-6.7
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
19
Rotatable Bond Count
16
Heavy Atom Count
63
Complexity
1620
Defined Atom Stereocenter Count
1
SMILES
CN(CCCN1CCN(CC1)C(=O)CN2CCN(CCN(CCN(CC2)CC(=O)O)CC(=O)O)CC(=O)O)C3=CC4=C(C=CN=C4C=C3)C(=O)NCC(=O)N5CC(C[C@H]5C#N)(F)F
InChi Key
SDBGUEFOSXNKBX-HKBQPEDESA-N
InChi Code
InChI=1S/C41H57F2N11O9/c1-47(30-3-4-34-33(21-30)32(5-6-45-34)40(63)46-24-35(55)54-29-41(42,43)22-31(54)23-44)7-2-8-48-17-19-53(20-18-48)36(56)25-49-9-11-50(26-37(57)58)13-15-52(28-39(61)62)16-14-51(12-10-49)27-38(59)60/h3-6,21,31H,2,7-20,22,24-29H2,1H3,(H,46,63)(H,57,58)(H,59,60)(H,61,62)/t31-/m0/s1
Chemical Name
2-[4,7-bis(carboxymethyl)-10-[2-[4-[3-[[4-[[2-[(2S)-2-cyano-4,4-difluoropyrrolidin-1-yl]-2-oxoethyl]carbamoyl]quinolin-6-yl]-methylamino]propyl]piperazin-1-yl]-2-oxoethyl]-1,4,7,10-tetrazacyclododec-1-yl]acetic acid
Synonyms
FAPI-46; 2374782-04-2; 59QC5DY68A; UNII-59QC5DY68A; (10-(2-(4-(3-((4-(((2-((2S)-2-Cyano-4,4-difluoro-1-pyrrolidinyl)-2-oxoethyl)amino)carbonyl)-6-quinolinyl)methylamino)propyl)-1-piperazinyl)-2-oxoethyl)-1,4,7,10-tetraazacyclododecane-1,4,7-triacetato(3-)-kappaN1,kappaN4,kappaN7,kappaN10)-; 2-[4,7-bis(carboxymethyl)-10-[2-[4-[3-[[4-[[2-[(2S)-2-cyano-4,4-difluoropyrrolidin-1-yl]-2-oxoethyl]carbamoyl]quinolin-6-yl]-methylamino]propyl]piperazin-1-yl]-2-oxoethyl]-1,4,7,10-tetrazacyclododec-1-yl]acetic acid; [10-[2-[4-[3-[[4-[[[2-[(2S)-2-Cyano-4,4-difluoro-1-pyrrolidinyl]-2-oxoethyl]amino]carbonyl]-6-quinolinyl]methylamino]propyl]-1-piperazinyl]-2-oxoethyl]-1,4,7,10-tetraazacyclododecane-1,4,7-triacetato(3-)-kappaN1,kappaN4,kappaN7,kappaN10]-; SCHEMBL21257093;
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
H2O : ~100 mg/mL (~112.87 mM)
DMSO : ~100 mg/mL (~112.87 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 5.75 mg/mL (6.49 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 57.5 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

Solubility in Formulation 2: ≥ 5 mg/mL (5.64 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 50.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.1287 mL 5.6435 mL 11.2871 mL
5 mM 0.2257 mL 1.1287 mL 2.2574 mL
10 mM 0.1129 mL 0.5644 mL 1.1287 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
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