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Deoxyguanosine triphosphate trisodium salt (dGTP trisodium salt; 2'-Deoxyguanosine-5'-triphosphate trisodium salt)

Alias: 2'-Deoxyguanosine-5'-triphosphate trisodium salt; dGTP trisodium salt; Deoxyguanosine triphosphate trisodium salt
Cat No.:V53207 Purity: ≥98%
Deoxyguanosine triphosphate (dGTP) trisodium salt is a nucleotide precursor used in DNA synthesis in cells.
Deoxyguanosine triphosphate trisodium salt (dGTP trisodium salt; 2'-Deoxyguanosine-5'-triphosphate trisodium salt)
Deoxyguanosine triphosphate trisodium salt (dGTP trisodium salt; 2'-Deoxyguanosine-5'-triphosphate trisodium salt) Chemical Structure CAS No.: 93919-41-6
Product category: DNA(RNA) Synthesis
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
100mg
500mg
1g
Other Sizes

Other Forms of Deoxyguanosine triphosphate trisodium salt (dGTP trisodium salt; 2'-Deoxyguanosine-5'-triphosphate trisodium salt):

  • 7-Deaza-7-propargylamino-ddGTP
  • 7-Deaza-2′-deoxyguanosine 5′-triphosphate (7-Deaza-2′-dGTP)
  • 7-Deaza-7-propargylamino-dGTP
  • 7-Deaza-7-propargylamino-3'-azidomethyl-dGTP
  • dGTP-15N5,d14 dilithium (2'-Deoxyguanosine-5'-triphosphate-15N5,d14 dilithium)
  • dGTP (2'-Deoxyguanosine-5'-triphosphate)
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
Deoxyguanosine triphosphate (dGTP) trisodium salt is a nucleotide precursor used in DNA synthesis in cells. In reverse transcription polymerase chain reaction (RT-PCR), deoxyguanosine triphosphate trisodium salt is utilized to amplify DNA.
Deoxyguanosine triphosphate trisodium salt (dGTP trisodium salt) is a nucleoside triphosphate and a nucleotide precursor used in cells for DNA synthesis. dGTP is used in the polymerase chain reaction (PCR) technique, in sequencing, and in cloning. It is a substrate for DNA polymerases and plays an essential role in DNA synthesis and repair. dGTP exists in all living species, ranging from bacteria to humans.
Biological Activity I Assay Protocols (From Reference)
Targets
dGTP targets DNA polymerases, serving as a substrate for DNA synthesis. It is incorporated into DNA during replication and repair. dGTP is also a target for antiviral drugs aimed at combating herpes simplex virus (HSV). Its biosynthesis from dGDP is catalyzed by nucleoside diphosphate kinase.
ln Vitro
dGTP demonstrates in vitro activity as a substrate for DNA polymerases in PCR, DNA sequencing, and cloning. It is essential for DNA synthesis and repair. The compound's activity is assessed by its ability to support DNA polymerization reactions in vitro.
ln Vivo
dGTP is essential for DNA synthesis in vivo and exists in all living species. It is involved in the metabolic disorder called the mitochondrial DNA depletion syndrome-3 pathway in humans. dGTP is also a target for antiviral drugs aimed at combating HSV.
Enzyme Assay
dGTP is used as a substrate in DNA polymerase assays to measure polymerase activity. The assay typically measures the incorporation of radiolabeled or fluorescently labeled dGTP into DNA. Inhibition of dGTP incorporation can be used to screen for antiviral compounds targeting DNA polymerases.
Cell Assay
dGTP is used in cell-free in vitro assays such as PCR, DNA sequencing, and cloning. It is added to reaction mixtures containing DNA polymerase, template DNA, primers, and other dNTPs. The compound's ability to support DNA synthesis is assessed by measuring the amplification or sequencing products.
Animal Protocol
dGTP is not typically administered in animal experiments as a therapeutic agent. It is used as a research reagent in molecular biology applications. Its role in DNA synthesis makes it essential for cell proliferation and viability in all living organisms.
ADME/Pharmacokinetics
dGTP is a naturally occurring nucleotide that is synthesized intracellularly. Its concentration is tightly regulated within cells. dGTP is involved in the mitochondrial DNA depletion syndrome-3 pathway in humans. The compound is used as a research reagent in molecular biology applications.
Toxicity/Toxicokinetics
dGTP is a naturally occurring nucleotide and is not considered toxic at physiological concentrations. However, imbalances in dNTP pools, including dGTP, can lead to mutagenesis and genomic instability. The compound is intended for research use only. Standard laboratory safety precautions should be followed when handling this compound.
References

[1]. The Ubiquitin Ligase TRIP12 Limits PARP1 Trapping and Constrains PARP Inhibitor Efficiency. Cell Rep. 2020 Aug 4;32(5):107985.

Additional Infomation
Deoxyguanosine triphosphate trisodium salt (dGTP trisodium salt; 2'-Deoxyguanosine-5'-triphosphate trisodium salt) (CAS#: 93919-41-6) has the molecular formula C10H13N5O13P3·3Na and a molecular weight of 589.13. It is a nucleoside triphosphate used in DNA synthesis, PCR, sequencing, and cloning. dGTP exists in all living species. It is for research use only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C10H13N5NA3O13P3
Molecular Weight
573.13
Exact Mass
572.941
CAS #
93919-41-6
Related CAS #
dGTP;2564-35-4
PubChem CID
135705223
Appearance
Colorless to light yellow liquid
LogP
0.589
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
15
Rotatable Bond Count
8
Heavy Atom Count
34
Complexity
876
Defined Atom Stereocenter Count
3
SMILES
O=C1N=C(N)NC2N([C@H]3C[C@H](O)[C@@H](COP(O)(=O)OP(O)(=O)OP(O)(O)=O)O3)C=NC1=2.[Na]
InChi Key
IWGGLKOTEOCWQP-BIHLCPNHSA-K
InChi Code
InChI=1S/C10H16N5O13P3.3Na/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(26-6)2-25-30(21,22)28-31(23,24)27-29(18,19)20;;;/h3-6,16H,1-2H2,(H,21,22)(H,23,24)(H2,18,19,20)(H3,11,13,14,17);;;/q;3*+1/p-3/t4-,5+,6+;;;/m0.../s1
Chemical Name
trisodium;[[[(2R,3S,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-oxidophosphoryl]oxy-oxidophosphoryl] hydrogen phosphate
Synonyms
2'-Deoxyguanosine-5'-triphosphate trisodium salt; dGTP trisodium salt; Deoxyguanosine triphosphate trisodium salt
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
H2O : ~66.7 mg/mL (~116.3 mM)
DMSO : < 1 mg/mL
Solubility (In Vivo)
Solubility in Formulation 1: 100 mg/mL (174.48 mM) in PBS (add these co-solvents sequentially from left to right, and one by one), clear solution; with sonication.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.7448 mL 8.7240 mL 17.4480 mL
5 mM 0.3490 mL 1.7448 mL 3.4896 mL
10 mM 0.1745 mL 0.8724 mL 1.7448 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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