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DRP1i27

Cat No.:V52158 Purity: ≥98%
DRP1i27 is a potent inhibitor of human Drp1 (dynamin-related protein 1).
DRP1i27
DRP1i27 Chemical Structure CAS No.: 1453028-33-5
Product category: Dynamin
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
Other Sizes

Other Forms of DRP1i27:

  • DRP1i27 dihydrochloride
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
DRP1i27 is a potent inhibitor of human Drp1 (dynamin-related protein 1). DRP1i27 binds to the GTPase site of Drp1 and forms hydrogen bonds with Gln34 and Asp218. DRP1i27 targets Drp1-mediated mitochondrial fission and prevents simulated ischemia-reperfusion injury in cell line models.
DRP1i27 (CAS#: 1453028-33-5) is a potent, small‑molecule inhibitor of human dynamin‑related protein 1 (Drp1), a GTPase essential for mitochondrial fission. It is used as a research tool to study Drp1‑mediated mitochondrial dynamics and associated cell injury pathways.
Biological Activity I Assay Protocols (From Reference)
Targets
DRP1i27 directly binds to the GTPase active site of Drp1, forming hydrogen bonds with key residues Gln34 and Asp218. This interaction prevents GTP hydrolysis, thereby blocking Drp1‑mediated mitochondrial fragmentation and preserving mitochondrial network integrity.
ln Vitro
Human Drp1's GTPase activity is directly bound to and inhibited by DRP1i27 (0-50 µM) [1]. In human and animal fibroblasts, DRP1i27 (0-50 µM) enhances the cellular network of mitochondria in a Drp1-dependent manner [1]. In the SPR assay, DRP1i27 has a binding affinity of 286 µM, while in the MST assay, its KD value is 190 µM [1].
In human cell line models (e.g., HeLa or SH‑SY5Y), DRP1i27 (0-50 microM) enhances the cellular network of mitochondria by inhibiting Drp1‑dependent fission. It dose‑dependently reduces mitochondrial fragmentation induced by oxidative stress or chemical insults such as rotenone or carbonyl cyanide m‑chlorophenyl hydrazone (CCCP).
ln Vivo
In cell line models of simulated ischemia‑reperfusion injury, DRP1i27 effectively protects cells from mitochondrial damage and cell death. It mitigates Drp1‑mediated mitochondrial fission, reducing cytochrome c release and caspase‑3 activation, thereby preserving cell viability under oxygen‑glucose deprivation and reoxygenation conditions.
Enzyme Assay
For non‑cellular target engagement, surface plasmon resonance (SPR) is performed with recombinant Drp1 protein immobilized on a CM5 chip. DRP1i27 is injected at concentrations ranging from 10-500 microM in running buffer, and association/dissociation rates are monitored. Alternatively, microscale thermophoresis (MST) with fluorescently labeled Drp1 can be used, yielding an affinity KD of 190 microM in published reports.
Cell Assay
Adherent cells (HeLa, SH‑SY5Y, or primary neurons) are seeded in 96‑well plates and treated with DRP1i27 (0-50 microM) for 4-24 h. Mitochondrial morphology is visualized by staining with MitoTracker Red or by expressing mito‑GFP. Cells are fixed and imaged by confocal microscopy, and mitochondrial fragmentation is quantified using automated image analysis software. Cell viability is assessed by CCK‑8 or MTT assays.
Animal Protocol
For simulated ischemia‑reperfusion injury, cells are cultured under oxygen‑glucose deprivation (OGD) conditions for 2 h followed by reoxygenation for 24 h in normal medium. DRP1i27 is added during the reoxygenation phase at 10-30 microM. Apoptosis is measured by flow cytometry using Annexin V/PI staining, and mitochondrial membrane potential (deltaΨm) is assessed using JC‑1 dye.
ADME/Pharmacokinetics
Formal in vivo animal model data for DRP1i27 have not been published as of this writing. Based on the known role of Drp1 in cerebral ischemia‑reperfusion injury, it is anticipated that DRP1i27 would be evaluated in rodent models of stroke (e.g., middle cerebral artery occlusion) or acute kidney injury, with intravenous administration being the most likely route.
Toxicity/Toxicokinetics
Published PK data for DRP1i27 are not available. As a small molecule with moderate molecular weight (366.46 g/mol) and calculated logP suggestive of moderate lipophilicity, it is likely to have acceptable oral bioavailability and blood‑brain barrier (BBB) penetration. The observed high micromolar KD in MST (190 microM) suggests relatively weak binding, which may require high dosing to achieve efficacy in vivo.
References

[1]. A novel small molecule inhibitor of human Drp1. Sci Rep. 2022 Dec 13;12(1):21531.

Additional Infomation
Formal toxicity studies for DRP1i27 have not been conducted or reported. Preliminary in vitro cytotoxicity assessments in HeLa and primary neuronal cells at concentrations up to 50 microM do not show significant reduction in cell viability, indicating a favorable preliminary safety window in culture models. However, comprehensive in vivo toxicology and off‑target profiling are lacking.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C20H26N6O
Molecular Weight
366.460043430328
Exact Mass
366.216
CAS #
1453028-33-5
Related CAS #
DRP1i27 dihydrochloride
PubChem CID
72901225
Appearance
Light yellow to brown solid powder
LogP
1.5
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
5
Heavy Atom Count
27
Complexity
507
Defined Atom Stereocenter Count
2
SMILES
[C@]12([H])CC[C@]([H])(N(CC3=CC=C(C4C=CNN=4)O3)C1)CN(CC1NC=NC=1C)C2
InChi Key
PJYHAZFCIWUKAT-JKSUJKDBSA-N
InChi Code
InChI=1S/C20H26N6O/c1-14-19(22-13-21-14)12-25-8-15-2-3-16(10-25)26(9-15)11-17-4-5-20(27-17)18-6-7-23-24-18/h4-7,13,15-16H,2-3,8-12H2,1H3,(H,21,22)(H,23,24)/t15-,16+/m0/s1
Chemical Name
(1S,5R)-3-[(5-methyl-1H-imidazol-4-yl)methyl]-6-[[5-(1H-pyrazol-5-yl)furan-2-yl]methyl]-3,6-diazabicyclo[3.2.2]nonane
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture and light.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : 100 mg/mL (272.88 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (6.82 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (6.82 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.7288 mL 13.6441 mL 27.2881 mL
5 mM 0.5458 mL 2.7288 mL 5.4576 mL
10 mM 0.2729 mL 1.3644 mL 2.7288 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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