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2',3'-O-Isopropylideneadenosine

Cat No.:V55274 Purity: ≥98%
2',3'-O-Isopropylideneadenosine is an adenine nucleoside analogue.
2',3'-O-Isopropylideneadenosine
2',3'-O-Isopropylideneadenosine Chemical Structure CAS No.: 362-75-4
Product category: Nucleoside Antimetabolite/Analog
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
2',3'-O-Isopropylideneadenosine is an adenine nucleoside analogue. Adenosine analogs mostly work as smooth muscle vasodilators and also have been found to suppress cancer progression. Its popular products include Adenosine phosphate, Acadesine , Clofarabine , Fludarabine phosphate and Vidarabine .
2',3'-O-Isopropylideneadenosine is an adenine nucleoside analog in which the 2' and 3' hydroxyl groups of the ribose moiety are protected by an isopropylidene group. Adenosine analogs mostly act as smooth muscle vasodilators and have also been shown to inhibit cancer progression. The isopropylidene protection allows for selective reactions at other functional groups, facilitating further chemical modifications. This compound serves as a key intermediate in the synthesis of various nucleosides essential for developing antiviral and anticancer drugs, including the selective A3 adenosine receptor agonist CI-IB-MECA and cordycepin. It is a research-grade compound not approved for human therapeutic use.
Biological Activity I Assay Protocols (From Reference)
Targets
Adenosine receptors; DNA synthesis pathways. As an adenosine analog, 2',3'-O-Isopropylideneadenosine exerts its biological effects primarily through adenosine receptor-mediated pathways. Adenosine analogs mostly act as smooth muscle vasodilators and have also been shown to inhibit cancer progression. The compound may interfere with nucleic acid metabolism when deprotected. The purine base adenine is crucial for its biological activity.
ln Vitro
2',3'-O-Isopropylideneadenosine demonstrates activity as an adenosine analog in cellular assays. Adenosine analogs mostly act as smooth muscle vasodilators and have been found to suppress cancer progression. The compound's in vitro activity is primarily studied in the context of nucleoside synthesis and as a precursor to bioactive nucleosides. Detailed IC50 values against specific targets have not been disclosed in publicly available literature.
ln Vivo
In vivo activity of 2',3'-O-Isopropylideneadenosine has not been extensively characterized as the compound is primarily a synthetic intermediate. Its derivatives, such as CI-IB-MECA (a selective A3 adenosine receptor agonist) and cordycepin, exhibit well-documented in vivo activities including vasodilation and anticancer effects. The protected compound itself is not typically used directly in vivo.
Enzyme Assay
In vitro assays for adenosine analogs typically involve receptor binding studies using radiolabeled ligands or functional assays measuring cAMP accumulation. For nucleoside synthesis applications, standard organic chemistry methods are used. The compound is typically characterized by HPLC, NMR, and mass spectrometry to confirm identity and purity. Deprotection steps remove the isopropylidene group to yield the free nucleoside for biological studies.
Cell Assay
Cells are not typically treated directly with 2',3'-O-Isopropylideneadenosine as it is a protected intermediate. The final deprotected nucleoside or derived compounds may be tested in cellular assays for adenosine receptor activity, vasodilation, or anticancer effects. Standard protocols for nucleoside analog studies in cell lines can be adapted.
Animal Protocol
In vivo animal studies for 2',3'-O-Isopropylideneadenosine have not been reported. The compound is primarily used as a research tool and synthetic intermediate. Future studies in animal models of cancer or cardiovascular disease would be needed to evaluate the in vivo efficacy of its derivatives.
ADME/Pharmacokinetics
Pharmacokinetic data for 2',3'-O-Isopropylideneadenosine have not been published. The compound has a molecular weight of 276.29 and formula C13H16N4O4. The isopropylidene protection may affect cellular permeability and stability. As a protected nucleoside, it is expected to be deprotected in vivo. In vivo PK parameters have not been characterized.
Toxicity/Toxicokinetics
Toxicology data for 2',3'-O-Isopropylideneadenosine have not been published. The compound is for research use only and not approved for human therapeutic applications. No systematic toxicological evaluation has been performed. Standard safety precautions for handling chemical intermediates should be observed.
References

[1]. Potential and promising anticancer drugs from adenosine and its analogs. Drug Discov Today. 2021 Jun;26(6):1490-1500.

Additional Infomation
See also: 2',3'-O-isoproterenol (note moved to).
2',3'-O-Isopropylideneadenosine (CAS: 362-75-4, molecular formula C13H16N4O4, molecular weight 276.29) is an adenine nucleoside analog and synthetic intermediate. It is widely utilized in nucleoside synthesis for developing antiviral and anticancer drugs. It is not in clinical trials and has no regulatory approval. The compound is supplied as a research-grade intermediate for laboratory use only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C13H17N5O4
Molecular Weight
307.31
Exact Mass
307.128
CAS #
362-75-4
Related CAS #
2',3'-O-Isopropylideneadenosine-13C5
PubChem CID
2723654
Appearance
White to off-white solid powder
Density
1.8±0.1 g/cm3
Boiling Point
570.5±60.0 °C at 760 mmHg
Melting Point
221-222 °C(lit.)
Flash Point
298.8±32.9 °C
Vapour Pressure
0.0±1.7 mmHg at 25°C
Index of Refraction
1.797
LogP
1.15
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
8
Rotatable Bond Count
2
Heavy Atom Count
22
Complexity
439
Defined Atom Stereocenter Count
4
SMILES
CC1(O[C@@H]2[C@H](O[C@H]([C@@H]2O1)N3C=NC4=C(N=CN=C43)N)CO)C
InChi Key
LCCLUOXEZAHUNS-WOUKDFQISA-N
InChi Code
InChI=1S/C13H17N5O4/c1-13(2)21-8-6(3-19)20-12(9(8)22-13)18-5-17-7-10(14)15-4-16-11(7)18/h4-6,8-9,12,19H,3H2,1-2H3,(H2,14,15,16)/t6-,8-,9-,12-/m1/s1
Chemical Name
[(3aR,4R,6R,6aR)-4-(6-aminopurin-9-yl)-2,2-dimethyl-3a,4,6,6a-tetrahydrofuro[3,4-d][1,3]dioxol-6-yl]methanol
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: ≥ 100 mg/mL (~325.4 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 5 mg/mL (16.27 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), Clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of DMSO stock solution (50.0 mg/mL) to 900 μL of corn oil and mix well.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.2540 mL 16.2702 mL 32.5404 mL
5 mM 0.6508 mL 3.2540 mL 6.5081 mL
10 mM 0.3254 mL 1.6270 mL 3.2540 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration: mg/mL;

Method for preparing DMSO stock solution: mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation::Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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