yingweiwo

Zingibroside R1

Cat No.:V29234 Purity: ≥98%
Zingibroside R1 is a triterpene saponin extracted from the roots of Panax japonicas CA Meyer that displays excellent anti-tumor and anti-angiogenic activity.
Zingibroside R1
Zingibroside R1 Chemical Structure CAS No.: 80930-74-1
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
100mg
Other Sizes
Official Supplier of:
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text

 

  • Business Relationship with 5000+ Clients Globally
  • Major Universities, Research Institutions, Biotech & Pharma
  • Citations by Top Journals: Nature, Cell, Science, etc.
Top Publications Citing lnvivochem Products
Product Description
Zingibroside R1 is a triterpene saponin extracted from the roots of Panax japonicas CA Meyer that displays excellent anti-tumor and anti-angiogenic activity. Zingibroside R1 has some activity against HIV-1. Zingibroside R1 inhibits 2-deoxy-D-glucose (2-DG) uptake by EAT cells (IC50=91.3 μM).
Zingibroside R1 (CAS 80930-74-1), also known as Ginsenoside Z-R1 or 28-O-deglucosyl-chikusetsusaponin V, is a triterpenoid saponin and an active metabolite of ginsenoside Ro. It has been found to exhibit anti-tumor, anti-angiogenic, and anti-HIV-1 activity. Zingibroside R1 is cytotoxic to B16/F10 murine melanoma cells (IC50 = 24.52 µg/ml) and inhibits tube formation by human umbilical vein endothelial cells (HUVECs) when used at a concentration of 40 µg/ml. It also has inhibitory effects on the 2-deoxy-D-glucose (2-DG) uptake by EAT cells (IC50 = 91.3 μM).
Biological Activity I Assay Protocols (From Reference)
Targets
Zingibroside R1 targets multiple pathways involved in cancer progression and viral infection. Its primary targets include HIV, against which it shows anti-HIV-1 activity. It exhibits anti-tumor effects by being cytotoxic to melanoma cells and shows anti-angiogenic activity by inhibiting tube formation in HUVECs. It also inhibits 2-deoxy-D-glucose (2-DG) uptake, suggesting an effect on glucose metabolism in cancer cells. These diverse activities make it a compound of interest for cancer and antiviral research.
ln Vitro
In vitro, Zingibroside R1 is cytotoxic to B16/F10 murine melanoma cells with an IC50 of 24.52 µg/ml. It inhibits tube formation by human umbilical vein endothelial cells (HUVECs) when used at a concentration of 40 µg/ml, indicating anti-angiogenic activity. It also inhibits the 2-deoxy-D-glucose (2-DG) uptake by EAT cells with an IC50 of 91.3 μM, suggesting an effect on glucose metabolism. These in vitro activities support its potential as an anti-cancer and anti-angiogenic agent.
ln Vivo
In vivo activity data for Zingibroside R1 is limited in publicly available literature. As a compound with potent anti-tumor, anti-angiogenic, and anti-HIV-1 activity in vitro, it is hypothesized to exhibit similar effects in animal models. However, specific in vivo efficacy studies, including pharmacokinetic and pharmacodynamic parameters, have not been detailed in the available sources. Further research is needed to fully characterize its in vivo activity and therapeutic potential.
Enzyme Assay
For cell-free enzyme assays, the anti-HIV-1 activity of Zingibroside R1 can be studied using HIV-1 reverse transcriptase or protease inhibition assays. The compound is incubated with the purified enzyme and its substrate, and the inhibition of enzyme activity is measured. The IC50 for enzyme inhibition can be calculated. Its anti-angiogenic activity can be assessed in cell-free systems by measuring its effect on the activity of matrix metalloproteinases (MMPs) or other angiogenic factors.
Cell Assay
For in vitro cellular assays, the anti-tumor activity of Zingibroside R1 is typically assessed in cancer cell lines, such as B16/F10 murine melanoma cells. Cells are seeded in multi-well plates and treated with varying concentrations of the compound for a defined period. Cell viability is measured using MTT, MTS, or SRB assays, and the IC50 value is calculated. Its anti-angiogenic activity is assessed using a tube formation assay with HUVECs. The effect on glucose metabolism can be studied by measuring 2-deoxy-D-glucose (2-DG) uptake.
Animal Protocol
For in vivo studies, Zingibroside R1 could be administered orally or intraperitoneally in rodent models of cancer or viral infection. In a xenograft model, its anti-tumor efficacy would be assessed by measuring tumor volume over time. In a model of angiogenesis, its anti-angiogenic effect could be assessed by measuring the formation of new blood vessels in a Matrigel plug assay. In an HIV-1 model, its antiviral efficacy could be assessed by measuring viral load.
ADME/Pharmacokinetics
Zingibroside R1 has a molecular formula of C42H66O14 and a molecular weight of 795.0 g/mol. Its CAS number is 80930-74-1. It is a triterpenoid saponin and is typically supplied as a white crystalline powder. It is soluble in DMSO and ethanol. For in vitro studies, stock solutions are prepared in DMSO. For in vivo administration, it can be formulated in suitable vehicles. Storage is recommended at -20°C, protected from light. Its purity is typically >98% for research use.
Toxicity/Toxicokinetics
No detailed toxicity data is publicly available. As a natural triterpenoid saponin, its safety profile would need to be established through standard toxicological studies. In vitro cytotoxicity assays in various cell lines are typically performed alongside efficacy studies to confirm that the observed effects are not due to a general reduction in cell viability.
References

[1]. Saponins composition of rhizomes, taproots, and lateral roots of Satsuma-ninjin (Panax japonicus). Chem Pharm Bull (Tokyo). 2013;61(3):344-50. Epub 2012 Dec 28.

[2]. Inhibitory effect of some triterpenoid saponins on glucose transport in tumor cells and its application to in vitro cytotoxic and antiviral activities. Planta Med. 1994 Jun;60 (3):240-3.

Additional Infomation
According to reports, ginseng, long-leaf camellia, and multiflora camellia contain gingerol R1, and there is relevant data.
Zingibroside R1 is a research-grade compound and is not approved for any therapeutic use. It serves primarily as a valuable pharmacological tool for studying cancer, angiogenesis, and viral infection. Its mechanism of action involves cytotoxicity against cancer cells, inhibition of angiogenesis, and anti-HIV-1 activity. These diverse activities make it a compound of interest for drug discovery. No clinical trials have been reported.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C42H66O14
Molecular Weight
794.965054988861
Exact Mass
794.445
CAS #
80930-74-1
PubChem CID
10395524
Appearance
White to off-white solid powder
Density
1.37±0.1 g/cm3
LogP
4.5
Hydrogen Bond Donor Count
8
Hydrogen Bond Acceptor Count
14
Rotatable Bond Count
7
Heavy Atom Count
56
Complexity
1560
Defined Atom Stereocenter Count
18
SMILES
C[C@]12[C@@]3(CC[C@H]4C(C)(C)[C@@H](O[C@@H]5O[C@H](C(=O)O)[C@@H](O)[C@H](O)[C@H]5O[C@H]5[C@H](O)[C@@H](O)[C@H](O)[C@@H](CO)O5)CC[C@@]4([C@H]3CC=C1[C@@H]1CC(C)(C)CC[C@@]1(CC2)C(=O)O)C)C
InChi Key
WJQOMUVKRDJBGZ-COUNGWPASA-N
InChi Code
InChI=1S/C42H66O14/c1-37(2)14-16-42(36(51)52)17-15-40(6)20(21(42)18-37)8-9-24-39(5)12-11-25(38(3,4)23(39)10-13-41(24,40)7)54-35-32(29(47)28(46)31(55-35)33(49)50)56-34-30(48)27(45)26(44)22(19-43)53-34/h8,21-32,34-35,43-48H,9-19H2,1-7H3,(H,49,50)(H,51,52)/t21-,22+,23-,24+,25-,26+,27-,28-,29-,30+,31-,32+,34-,35+,39-,40+,41+,42-/m0/s1
Chemical Name
(2S,3S,4S,5R,6R)-6-[[(3S,4aR,6aR,6bS,8aS,12aS,14aR,14bR)-8a-carboxy-4,4,6a,6b,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3,4-dihydroxy-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2-carboxylic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~125.79 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (3.14 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (3.14 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

View More

Solubility in Formulation 3: ≥ 2.5 mg/mL (3.14 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.2579 mL 6.2895 mL 12.5791 mL
5 mM 0.2516 mL 1.2579 mL 2.5158 mL
10 mM 0.1258 mL 0.6290 mL 1.2579 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
/

Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
+
+
+

Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Contact Us