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Torcitabine

Alias: Torcitabine; L-dC; Torcitabine; L-Deoxycytidine; NV-02C; NV 02C; NV02C;
Cat No.:V16597 Purity: ≥98%
Torcitabine (2'-Deoxy-L-cytidine) is an antiviral active molecule.
Torcitabine
Torcitabine Chemical Structure CAS No.: 40093-94-5
Product category: HBV
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
25mg
50mg
100mg
250mg
500mg
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Product Description
Torcitabine (2'-Deoxy-L-cytidine) is an antiviral active molecule. Torcitabine may be utilized in study/research of chronic hepatitis B virus infection.
Torcitabine (2'-Deoxy-L-cytidine, L-dC) is a beta-L-enantiomer nucleoside analog that was developed as an investigational antiviral agent for the treatment of chronic hepatitis B virus (HBV) infection. It is also known as BCH-189. Torcitabine acts by incorporating itself into viral DNA, effectively inhibiting reverse transcriptase and viral replication. It shows greater inhibition of first strand than second strand DNA synthesis.
Biological Activity I Assay Protocols (From Reference)
Targets
The primary target of Torcitabine is viral DNA polymerase (reverse transcriptase). As a nucleoside analog, it is incorporated into viral DNA during replication, acting as a chain terminator. This inhibits the synthesis of viral DNA, especially having a greater inhibitory effect on the synthesis of the first strand of DNA than the second strand. The compound is a nucleoside inhibitor active against hepatitis B virus. It also exhibits activity against HIV.
ln Vitro
First strand DNA synthesis is more inhibited by toracitbine (2'-Deoxy-L-cytidine) than second strand DNA synthesis.
In vitro, Torcitabine has shown antiviral potency. It exhibits greater inhibition of first strand than second strand DNA synthesis. The compound has been shown to inhibit the growth of bacteria that are resistant to tetracycline, such as Mycobacterium tuberculosis and Helicobacter pylori. However, its antiviral activity has not been fully evaluated in vivo.
ln Vivo
In vivo, Torcitabine has the potential for chronic hepatitis B virus infection treatment. It showed promise in early studies for reducing viral load, particularly in cases resistant to other antiviral therapies. However, due to toxicity concerns, its development for HIV and HBV treatment has been limited. Despite these challenges, torcitabine remains a molecule of interest in antiviral research.
Enzyme Assay
In vitro enzyme or receptor binding assays for Torcitabine involve measuring its inhibition of viral DNA polymerase activity. The assay uses purified recombinant HBV or HIV reverse transcriptase and a template-primer substrate. The incorporation of radiolabeled nucleotides into the growing DNA chain is measured. The compound is incubated with the enzyme and substrate at varying concentrations to determine the IC50.
Cell Assay
In vitro cell-based assays for Torcitabine are performed using HBV-infected or HIV-infected cell lines. Cells are treated with the compound, and viral replication is measured by quantifying viral DNA or RNA using PCR or Southern blotting. Cytotoxicity is assessed using standard cell viability assays. The compound's effects on viral DNA synthesis and chain termination are evaluated.
Animal Protocol
In vivo animal experiments for Torcitabine are limited due to toxicity concerns. Early studies showed promise in reducing viral load in animal models of HBV infection. However, detailed protocols for in vivo studies are not well-documented. The compound is typically administered orally or intravenously in preclinical studies.
ADME/Pharmacokinetics
Pharmacokinetic (PK) properties of Torcitabine indicate that it has a molecular weight of 227.22 and a molecular formula of C9H13N3O4. It has a purity of ≥95%. The IUPAC name is 4-amino-1-[(2S,4R,5S)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one. The compound is a nucleoside analog. Storage at -20°C is recommended.
Toxicity/Toxicokinetics
Toxicology (toxicology) data for Torcitabine indicate that it has toxicity concerns that have limited its development. The compound's safety profile in the context of therapeutic use requires further evaluation. The compound is for research use only and not for human therapeutic use.
References

[1]. Drugs in development for hepatitis B. Drugs. 2005;65(11):1451‐1460.

[2]. Keam SJ. Telbivudine. Drugs. 2007;67(13):1917‐1929.

Additional Infomation
Tocilitabine is a nucleoside inhibitor active against hepatitis B virus. In vivo, tocilitabine is modified into a triphosphate form and acts as a competitive inhibitor of viral DNA polymerase.
Other information: Torcitabine is also known as 2'-Deoxy-L-cytidine, L-dC, BCH-189, and NV-02C. It is a beta-L-enantiomer nucleoside analog. The compound was developed by Idenix (Originator). It has the potential for chronic hepatitis B virus infection research. Its CAS number is 40093-94-5.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C9H13N3O4
Molecular Weight
227.22
Exact Mass
227.091
Elemental Analysis
C, 47.57; H, 5.77; N, 18.49; O, 28.16
CAS #
40093-94-5
PubChem CID
159354
Appearance
White to off-white solid powder
Density
1.73 g/cm3
Boiling Point
497.6ºC at 760 mmHg
Flash Point
254.8ºC
Index of Refraction
1.719
LogP
-1.8
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
2
Heavy Atom Count
16
Complexity
355
Defined Atom Stereocenter Count
3
SMILES
O=C1N=C(N)C=CN1[C@@H]2O[C@@H](CO)[C@H](O)C2
InChi Key
CKTSBUTUHBMZGZ-CHKWXVPMSA-N
InChi Code
InChI=1S/C9H13N3O4/c10-7-1-2-12(9(15)11-7)8-3-5(14)6(4-13)16-8/h1-2,5-6,8,13-14H,3-4H2,(H2,10,11,15)/t5-,6+,8+/m1/s1
Chemical Name
4-amino-1-((2S,4R,5S)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)pyrimidin-2(1H)-one
Synonyms
Torcitabine; L-dC; Torcitabine; L-Deoxycytidine; NV-02C; NV 02C; NV02C;
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~250 mg/mL (~1100.26 mM )
H2O : ~250 mg/mL (~1100.26 mM )
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.08 mg/mL (9.15 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.08 mg/mL (9.15 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.08 mg/mL (9.15 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


Solubility in Formulation 4: 10% DMSO+40% PEG300+5% Tween-80+45% Saline: ≥ 2.08 mg/mL (9.15 mM)

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 4.4010 mL 22.0051 mL 44.0102 mL
5 mM 0.8802 mL 4.4010 mL 8.8020 mL
10 mM 0.4401 mL 2.2005 mL 4.4010 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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