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TDRL-551

Alias: TDRL 551 TDRL-551 TDRL551.
Cat No.:V15983 Purity: ≥98%
TDRL-551 is a potent replication protein A (RPA) inhibitor (IC50=18 µM).
TDRL-551
TDRL-551 Chemical Structure CAS No.: 1644626-43-6
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
25mg
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100mg
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Product Description
TDRL-551 is a potent replication protein A (RPA) inhibitor (IC50=18 µM). TDRL-551 inhibits RPA-DNA interaction and improves the efficacy of platinum-based chemotherapy for lung and ovarian cancer. RPA plays a crucial role in nucleotide excision repair (NER) and homologous recombination (HR), as well as in DNA replication and DNA damage checkpoint activation.
TDRL-551 is a potent inhibitor of replication protein A (RPA) with an IC50 of 18 µM. It is a small-molecule compound that inhibits RPA-DNA interaction and improves the efficacy of platinum-based chemotherapy for lung and ovarian cancer. RPA plays a crucial role in nucleotide excision repair (NER) and homologous recombination (HR), as well as in DNA replication and DNA damage checkpoint activation.
Biological Activity I Assay Protocols (From Reference)
Targets
TDRL-551 targets replication protein A (RPA), an essential single-stranded DNA (ssDNA) binding protein complex in eukaryotes. RPA plays a crucial role in multiple key biological processes such as DNA replication, nucleotide excision repair (NER), homologous recombination (HR), telomere maintenance, and viral defense. By inhibiting RPA-DNA interaction, TDRL-551 disrupts these essential DNA metabolic processes.
ln Vitro
In vitro, TDRL-551 is a potent RPA inhibitor with an IC50 of 18 µM. It inhibits RPA-DNA interaction and increases the anticancer efficacy of platinum-based chemotherapy. The compound is used in research to study the role of RPA in DNA repair and replication, and to investigate strategies for sensitizing cancer cells to DNA-damaging agents.
ln Vivo
In vivo, TDRL-551 improves the efficacy of platinum-based chemotherapy for lung and ovarian cancer. By inhibiting RPA, the compound sensitizes tumors to platinum-based chemotherapeutics, enhancing their anticancer efficacy. It has been studied in preclinical models of non-small cell lung cancer (NSCLC) and ovarian cancer, demonstrating potential as a chemosensitizing agent.
Enzyme Assay
In vitro enzyme/receptor binding assays for TDRL-551 measure its inhibition of RPA-DNA interaction. The assay typically involves incubating RPA protein with labeled DNA substrates in the presence of varying concentrations of the compound. The extent of RPA-DNA binding is quantified by electrophoretic mobility shift assays (EMSA) or fluorescence polarization. The IC50 of 18 µM is determined from dose-response curves.
Cell Assay
In vitro cell-based assays for TDRL-551 use cancer cell lines such as non-small cell lung cancer (NSCLC) cells. Cells are treated with serial dilutions of the compound, and the effects on cell viability, proliferation, and sensitivity to platinum-based chemotherapy are assessed using MTT or colony formation assays. The compound's ability to inhibit RPA function is confirmed by measuring DNA repair capacity or replication fork progression in treated cells.
ADME/Pharmacokinetics
TDRL-551 has a molecular weight of 591.83 and a molecular formula of C25H23ClIN3O4. It is soluble in DMSO at approximately 62.5 mg/mL (~105.60 mM). For in vivo administration, the compound can be formulated in 10% DMSO + 90% corn oil at ≥2.08 mg/mL (3.51 mM). The compound is stored as a powder at -20°C for up to 3 years or in solution at -80°C for up to 6 months.
Toxicity/Toxicokinetics
Toxicity data for TDRL-551 are available from preclinical safety studies. As an RPA inhibitor, the compound's toxicity profile is assessed in standard toxicology studies. The compound is for research use only and not for human use. Appropriate safety precautions should be taken during handling. The no-observed-adverse-effect level (NOAEL) and maximum tolerated dose (MTD) are determined from dose-escalation studies.
References

[1]. Chemical inhibitor targeting the replication protein A-DNA interaction increases the efficacy of Pt-based chemotherapy in lung and ovarian cancer. Biochem Pharmacol. 2015;93(1):25-33.

Additional Infomation
TDRL-551 is a research compound used to study the role of replication protein A (RPA) in DNA repair and replication. It is a novel small-molecule antiviral agent under investigation for its potential to treat viral infections, designed to inhibit the replication of specific viruses by targeting critical viral proteins or host factors essential for the viral life cycle. The compound is not approved for clinical use.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C25H23CLIN3O4
Molecular Weight
591.83
Exact Mass
591.042
CAS #
1644626-43-6
PubChem CID
121336921
Appearance
Off-white to light yellow solid powder
LogP
4.7
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
6
Rotatable Bond Count
8
Heavy Atom Count
34
Complexity
760
Defined Atom Stereocenter Count
0
SMILES
C(N1N=C(C2C=CC(I)=CC=2)CC1C1C(=NC2C=C(OCC)C=CC=2C=1)Cl)(=O)CCCC(=O)O
InChi Key
QHNTZIUSUGGSNE-UHFFFAOYSA-N
InChi Code
InChI=1S/C25H23ClIN3O4/c1-2-34-18-11-8-16-12-19(25(26)28-20(16)13-18)22-14-21(15-6-9-17(27)10-7-15)29-30(22)23(31)4-3-5-24(32)33/h6-13,22H,2-5,14H2,1H3,(H,32,33)
Chemical Name
5-(5-(2-chloro-7-ethoxyquinolin-3-yl)-3-(4-iodophenyl)-4,5-dihydro-1H-pyrazol-1-yl)-5-oxopentanoic acid
Synonyms
TDRL 551 TDRL-551 TDRL551.
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~62.5 mg/mL (~105.60 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.08 mg/mL (3.51 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.6897 mL 8.4484 mL 16.8967 mL
5 mM 0.3379 mL 1.6897 mL 3.3793 mL
10 mM 0.1690 mL 0.8448 mL 1.6897 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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