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SMER28

Alias: SMER-28; SMER28; SMER 28
Cat No.:V3278 Purity: ≥98%
SMER28 is a small molecule activator (enhancer/modulator) ofautophagythat acts via an mTOR-independent mechanism.
SMER28
SMER28 Chemical Structure CAS No.: 307538-42-7
Product category: Autophagy
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

SMER28 is a small molecule activator (enhancer/modulator) of autophagy that acts via an mTOR-independent mechanism. It induces autophagy independent of rapamycin in mammalian cells and prevents the accumulation of amyloid beta peptide. The hallmarks of Alzheimer's disease are the aggregates of amyloid-β (Αβ) peptide and tau protein. Autophagy is one major cellular pathway leading to the removal of aggregated proteins. Induction of autophagy by small-molecule enhancers such as SMER28 greatly decreased the levels of Aβ peptide (apparent EC50 of ∼10 μM) and APP-CTF (apparent EC50 of ∼20 μM) in a γ-secretase-independent manner. Pharmacological inhibition of autophagy led to a significant accumulation of Aβ peptide and APP-CTF and diminished the effect of SMER28. Therefore, SMER28 may have therapeutic potential to be used for the treatment of Alzheimer's disease and other proteinopathies.

Biological Activity I Assay Protocols (From Reference)
ln Vitro
Cell viability in SMER28 (5-200 μM; 24 hours) decreases with dose[4].
ln Vivo
Mice survival is increased at 65 mg/kg of SMER28 (15-65 mg/kg; ih; daily, two days prior to irradiation and over the three days of irradiation) and is strongly protected against post-irradiation weight loss[5].
Cell Assay
Cell Viability Assay[4]
Cell Types: MMS1 cells
Tested Concentrations: 5, 25, 50, 75, 100, 150, 200 μM
Incubation Duration: 24 hrs (hours)
Experimental Results: demonstrated a dose dependent decline of cell viability.
Animal Protocol
Animal/Disease Models: 14 to 16 weeks male mice (Balb/c)[5]
Doses: 15, 65 mg/kg
Route of Administration: subcutaneous (sc) injection; two days before irradiation and during the three days of irradiation (total 5 days)
Experimental Results: Dramatically protected against post- irradiation weight loss and enhanced survival of mice at 65 mg/kg.
References
[1]. Renna M et al. Chemical inducers of autophagy that enhance the clearance of mutant proteins in neurodegenerative diseases. J Biol Chem. 2010 Apr 9;285(15):11061-7.
[2]. Nekova TS, et al. Small molecule enhancers of rapamycin induce apoptosis in myeloma cells via GSK3A/Bpreferentially within a protective bone marrow microenvironment. Br J Haematol. 2014 Oct;167(2):272-4.
[3]. Shen D et al. Novel cell- and tissue-based assays for detecting misfolded and aggregated protein accumulation within aggresomes and inclusion bodies. Cell Biochem Biophys. 2011 Jul;60(3):173-85.
[4]. Koukourakis MI, et al. SMER28 is a mTOR-independent small molecule enhancer of autophagy that protects mouse bone marrow and liver against radiotherapy. Invest New Drugs. 2018 Oct;36(5):773-781.
[5]. Tian Y et al. A small-molecule enhancer of autophagy decreases levels of Abeta and APP-CTF via Atg5-dependent autophagy pathway. FASEB J. 2011 Jun;25(6):1934-42.
Additional Infomation
SMER 28 is a member of the class of quinazolines that is quinazoline which is substituted by a prop-2-en-1-ylnitrilo group and a bromo group at positions 4 and 6, respectively. It is a modulator of mammalian autophagy. It has a role as an autophagy inducer. It is a member of quinazolines, a secondary amino compound and an organobromine compound.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C11H10BRN3
Molecular Weight
264.12
Exact Mass
263.006
Elemental Analysis
C, 50.02; H, 3.82; Br, 30.25; N, 15.91
CAS #
307538-42-7
Related CAS #
307538-42-7
PubChem CID
1560402
Appearance
Solid powder
Melting Point
169 °C
LogP
2.412
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
3
Rotatable Bond Count
3
Heavy Atom Count
15
Complexity
222
Defined Atom Stereocenter Count
0
SMILES
C=CCNC1=C2C=C(Br)C=CC2=NC=N1
InChi Key
BCPOLXUSCUFDGE-UHFFFAOYSA-N
InChi Code
InChI=1S/C11H10BrN3/c1-2-5-13-11-9-6-8(12)3-4-10(9)14-7-15-11/h2-4,6-7H,1,5H2,(H,13,14,15)
Chemical Name
6-bromo-N-2-propen-1-yl-4-quinazolinamine
Synonyms
SMER-28; SMER28; SMER 28
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO:≥ 30 mg/mL
Water:N/A
Ethanol:N/A
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (9.47 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (9.47 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (9.47 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.7862 mL 18.9308 mL 37.8616 mL
5 mM 0.7572 mL 3.7862 mL 7.5723 mL
10 mM 0.3786 mL 1.8931 mL 3.7862 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
  • SMER28

    Effect of SMER28 on levels of Aβ peptide and APP-CTF.2011 Jun;25(6):1934-42.

  • SMER28

    SMER28 and starvation lead to reduced levels of Aβ peptide and APP-CTF through autophagy pathway.2011 Jun;25(6):1934-42.

  • SMER28

    SMER28-induced clearance of Aβ40 and APP-CTF is dependent on Atg5.2011 Jun;25(6):1934 -42.

  • SMER28

    Beclin1 and Ulk1 regulate basal, but not SMER28-induced, clearance of Aβ40 and APP-CTF.2011 Jun;25(6):1934-42.

  • SMER28

    SMER28 induced cocompartmentalization of APP-CTF and LC3-II.A) N2a-APP cells were treated for 6 h with SMER28 (50 μM), and whole-cell lysates were fractionated by sucrose gradient.2011 Jun;25(6):1934-42.

  • SMER28

    Autophagy as a protective pathway for neurodegenerative diseases.2010 Apr 9;285(15):11061-7.

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