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S29434

Cat No.:V28990 Purity: ≥98%
S29434 (NMDPEF) is a potent, competitive, selective and cell membrane-permeable inhibitor of quinone reductase 2 (QR2), with IC50s ranging from 5 to 16 nM for human QR2 at different organizational levels, and has good selectivity for QR2 over QR1.
S29434
S29434 Chemical Structure CAS No.: 874484-20-5
Product category: Autophagy
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
S29434 (NMDPEF) is a potent, competitive, selective and cell membrane-permeable inhibitor of quinone reductase 2 (QR2), with IC50s ranging from 5 to 16 nM for human QR2 at different organizational levels, and has good selectivity for QR2 over QR1. S29434 (NMDPEF) induces autophay and inhibits QR2-mediated ROS production.
S29434 (NMDPEF) (CAS: 874484-20-5) is a potent, competitive, selective, and cell-permeable inhibitor of quinone reductase 2 (QR2). With a molecular formula of C21H18N4O3 and a molecular weight of 374.39 g/mol, it is a research compound used to study the role of QR2 in cellular processes. Its inhibition of QR2 can induce autophagy.
Biological Activity I Assay Protocols (From Reference)
Targets
S29434 targets quinone reductase 2 (QR2, also known as NQO2). It is a potent inhibitor with IC50 values ranging from 5 to 16 nM for human QR2. It exhibits high selectivity for QR2 over the related enzyme QR1 (NQO1). By inhibiting QR2, it reduces QR2-mediated production of reactive oxygen species (ROS).
ln Vitro
In vitro, S29434 is characterized by its potent and selective inhibition of QR2. Its IC50 in the nanomolar range (5-16 nM) demonstrates high efficacy. Its activity is confirmed in enzyme assays where it inhibits the reduction of QR2 substrates. By inhibiting QR2, it can induce autophagy in cells, which is a key mechanism for its biological effects.
ln Vivo
In vivo, S29434 is used as a research tool to study the role of QR2 in various physiological and pathological processes. By inhibiting QR2 and inducing autophagy, it can be used to study the effects of autophagy in models of disease, including cancer and neurodegeneration. Its ability to inhibit QR2-mediated ROS production also makes it relevant for studies of oxidative stress.
Enzyme Assay
The in vitro enzyme assay for S29434 involves measuring the activity of QR2. The enzyme is incubated with a substrate, such as menadione or a fluorogenic QR2 substrate, and the cofactor N-ribosyl-dihydronicotinamide (NRH). The rate of substrate reduction is measured, typically by following the change in absorbance or fluorescence. The compound's ability to inhibit this activity is measured, and the IC50 is calculated.
Cell Assay
Cell Autophagy Assay[1]
Cell Types: HepG2 cell line
Tested Concentrations: 5 and 10 μM
Incubation Duration: 24 hrs (hours)
Experimental Results: Mitochondria ROS-independently and QR2 S29434 (5-10 μM; 24 h) induces autophagy in HepG2 cells[1]. -dependent triggering of autophagy, and dose-dependent induction of LC3-II, a marker of autophagic vesicles.
In vitro cell culture studies for S29434 involve treating cells with the compound and assessing its effects. Autophagy induction is confirmed by detecting the conversion of LC3-I to LC3-II and the accumulation of autophagosomes, using Western blotting or fluorescence microscopy. The reduction in QR2-mediated ROS production can be measured using a ROS-sensitive fluorescent probe like DCFH-DA.
Animal Protocol
Animal/Disease Models: CH3 wild-type mice [1]
Doses: 1 and 15 mg/kg
Route of Administration: intraperitoneal (ip) injection; S29434 (1 and 15 mg/kg; ip once) affects object recognition memory [1]. 1 and 15 mg/kg once
Experimental Results: Positive effects on memory by inhibiting QR2.
In vivo animal experiments for S29434 are not widely documented. As a research tool, it could be administered to rodents to study the effects of QR2 inhibition and autophagy induction in various disease models. For example, in a model of neurodegeneration, its ability to reduce oxidative stress and enhance clearance of aggregated proteins could be assessed.
ADME/Pharmacokinetics
S29434 has a molecular weight of 374.39 g/mol and is a solid compound. It is soluble in DMSO (19.29 mg/mL). It is typically stored as a powder at -20°C, with stock solutions stable for up to one year at -80°C. It is cell-permeable, which is essential for its use in cellular studies.
Toxicity/Toxicokinetics
Toxicological data for S29434 are limited, as it is a research compound. It is not intended for human use. Comprehensive toxicity studies have not been reported. Standard safety precautions for handling chemical reagents should be followed. Its effects on autophagy and ROS suggest it could have significant biological activity.
References
[1]. Boutin JA, et al. S29434, a Quinone Reductase 2 Inhibitor: Main Biochemical and Cellular Characterization. Mol Pharmacol. 2019 Mar;95(3):269-285.
Additional Infomation
S29434 is a research compound with no clinical approval. It is a valuable tool for studying the biology of QR2 and the role of autophagy in health and disease. By providing a selective inhibitor for QR2, it helps to dissect the specific functions of this enzyme, which is important for understanding its role in oxidative stress, inflammation, and other pathological processes.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C21H18N4O3
Molecular Weight
374.392624378204
Exact Mass
374.137
CAS #
874484-20-5
PubChem CID
46861897
Appearance
Typically exists as solid at room temperature
LogP
2.3
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
5
Heavy Atom Count
28
Complexity
576
Defined Atom Stereocenter Count
0
SMILES
COC1=NC2=C(C=C1)N3CC4=C(C3=C2CCNC(=O)C5=CC=CO5)N=CC=C4
InChi Key
XJIUMLVQBQKCJA-UHFFFAOYSA-N
InChi Code
InChI=1S/C21H18N4O3/c1-27-17-7-6-15-19(24-17)14(8-10-23-21(26)16-5-3-11-28-16)20-18-13(12-25(15)20)4-2-9-22-18/h2-7,9,11H,8,10,12H2,1H3,(H,23,26)
Chemical Name
N-[2-(5-methoxy-1,6,11-triazatetracyclo[7.7.0.02,7.010,15]hexadeca-2(7),3,5,8,10(15),11,13-heptaen-8-yl)ethyl]furan-2-carboxamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~19.29 mg/mL (~51.52 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 1.93 mg/mL (5.16 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 19.3 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.6710 mL 13.3551 mL 26.7101 mL
5 mM 0.5342 mL 2.6710 mL 5.3420 mL
10 mM 0.2671 mL 1.3355 mL 2.6710 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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