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RR6

Cat No.:V33141 Purity: ≥98%
RR6 (RR-6; RR 6) is a novel,orally bioactive and selective vanin inhibitor.
RR6
RR6 Chemical Structure CAS No.: 1351758-37-6
Product category: New8
This product is for research use only, not for human use. We do not sell to patients.
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Product Description

RR6 (RR-6; RR 6) is a novel, orally bioactive and selective vanin inhibitor. Oral administration of RR6 in rats completely inhibited plasma vanin activity and caused alterations of plasma lipid concentrations upon fasting, thereby illustrating its potential use in chemical biology research.

Biological Activity I Assay Protocols (From Reference)
Targets
Vanin-1 (VNN1) / Pantetheinase (IC₅₀: 0.54 µM for recombinant human vanin-1; 0.040 µM for human serum pantetheinase; 0.041 µM for fetal bovine serum pantetheinase; 0.087 µM for rat serum pantetheinase).
No significant inhibition of human serum biotinidase (IC₅₀ > 200 µM).
No inhibition of human cathepsins B, L, or papain at up to 200 µM. [1]
ln Vitro
RR6 is a selective, reversible, and competitive inhibitor of mammalian vanins (pantetheinase).
It inhibits recombinant human vanin-1 with an IC₅₀ of 0.54 µM (0.43–0.68 µM, 95% CI).
Inhibition potency is higher in serum: IC₅₀ values are 40 nM for human serum, 41 nM for fetal bovine serum, and 87 nM for rat serum.
Lineweaver-Burk analysis confirmed competitive inhibition with respect to the substrate AMC-Pan.
Gel permeation chromatography with bovine serum pre-incubated with RR6 showed complete recovery of vanin activity after separation, indicating reversible binding.
RR6 showed no inhibitory activity against biotinidase (IC₅₀ > 200 µM) or against the cysteine proteases cathepsin B, cathepsin L, and papain at concentrations up to 200 µM. [1]
ln Vivo
After fasting, lumen RR6 totally suppressed venous stent activity and increased venous stent concentration in the Wistar piston (150–200 g). In the middle of the piston, an RR6 adjustment of 3 mg/mL nearly entirely inhibited the intravenous stent [1].
Oral administration of RR6 to rats dose-dependently inhibited plasma vanin activity.
A single oral dose of 50 mg/kg resulted in complete inhibition of plasma vanin activity lasting up to 8 hours.
When administered in drinking water (3 mg/mL) for 4 days, RR6 caused nearly complete inhibition of plasma vanin activity.
In rats fasted for 24 hours after 4 days of RR6 treatment (3 mg/mL in drinking water), plasma free fatty acid (FFA) levels significantly increased, and plasma cholesterol levels significantly decreased compared to control rats. Plasma glucose levels were not altered. [1]
Enzyme Assay
Pantetheinase activity was measured using the fluorogenic substrate pantothenate-7-amino-4-methylcoumarin (AMC-Pan).
For inhibition assays, samples (recombinant human vanin-1 or diluted serum) were pre-incubated with inhibitor for 10 minutes before adding AMC-Pan (final concentration 10 µM) in PBS pH 7.4.
Reactions were stopped after 10 minutes, diluted, and fluorescence was measured (excitation 360 nm, emission 450 nm).
IC₅₀ values were determined from dose-response curves using inhibitor dilutions ranging from 10⁻¹⁰ to 10⁻³ M.
To determine the mode of inhibition, reactions were performed with varying substrate concentrations (1–300 µM) in the presence or absence of RR6, and data were analyzed using Lineweaver-Burk plots.
For measuring activity in undiluted rat plasma from treated animals, a buffered AMC-Pan solution was dried in wells, plasma was added, and hydrolysis was measured as above. [1]
Animal Protocol
For pharmacodynamic studies, female Wistar rats (200–250 g) received a single oral dose of RR6 dissolved in 10% DMSO in PBS at doses of 2, 10, or 50 mg/kg.
Alternatively, RR6 was administered via drinking water at concentrations of 0.3, 1, or 3 mg/mL.
Blood samples were collected at various time points, and plasma was prepared by centrifugation for pantetheinase activity measurement.
For metabolic studies, male Wistar rats (150–200 g) received RR6 in drinking water (3 mg/mL) for 4 days, followed by a 24-hour fasting period.
Blood was collected after fasting, plasma was prepared, and metabolites (free fatty acids, glucose, cholesterol) were analyzed using commercial assay kits. [1]
ADME/Pharmacokinetics
In rats, oral administration of RR6 resulted in dose-dependent inhibition of plasma vanillin activity, indicating systemic exposure and bioavailability. A single oral dose of 50 mg/kg completely inhibited plasma vanillin activity for up to 8 hours. Administration through drinking water (3 mg/mL) almost completely inhibited plasma vanillin activity, indicating sustained exposure.
Toxicity/Toxicokinetics
No adverse reactions were observed in the animals at any of the doses (up to 50 mg/kg for a single oral dose or dissolved in drinking water at a concentration of 3 mg/mL for 4 consecutive days). [1]
References

[1]. Discovery of small molecule vanin inhibitors: new tools to study metabolism and disease. ACS Chem Biol. 2013 Mar 15;8(3):530-4.

Additional Infomation
RR6 is a pantothenic acid thioethylamine analog designed as a reversible competitive inhibitor of pantothenic acid thioethylamine. It represents a novel chemical biology tool for studying the function of pantothenic acid thioethylamine in health and disease, particularly in lipid metabolism and the PPAR-α signaling pathway. Studies have shown that pantothenic acid thioethylamine-1, as a PPAR-α target, may play a role in nutrient/lipid metabolism during fasting, as evidenced by changes in plasma free fatty acids and cholesterol after RR6 treatment. The compound exhibits high selectivity for pantothenic acid thioethylamine but no significant selectivity for related enzymes such as biotinylate and common cysteine proteases. [1]
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C16H23NO4
Molecular Weight
293.35812497139
Exact Mass
293.162
CAS #
1351758-37-6
PubChem CID
54754611
Appearance
White to off-white solid powder
Density
1.2±0.1 g/cm3
Boiling Point
559.5±50.0 °C at 760 mmHg
Flash Point
292.2±30.1 °C
Vapour Pressure
0.0±1.6 mmHg at 25°C
Index of Refraction
1.542
LogP
0.71
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
8
Heavy Atom Count
21
Complexity
348
Defined Atom Stereocenter Count
1
SMILES
CC(C)(CO)[C@H](C(=O)NCCC(=O)CC1=CC=CC=C1)O
InChi Key
PTVUGLNOPRZQEY-AWEZNQCLSA-N
InChi Code
InChI=1S/C16H23NO4/c1-16(2,11-18)14(20)15(21)17-9-8-13(19)10-12-6-4-3-5-7-12/h3-7,14,18,20H,8-11H2,1-2H3,(H,17,21)/t14-/m0/s1
Chemical Name
(2R)-2,4-dihydroxy-3,3-dimethyl-N-(3-oxo-4-phenylbutyl)butanamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ≥ 100 mg/mL (~340.88 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 3.25 mg/mL (11.08 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 32.5 mg/mL clear DMSO stock solution to 400 μL of PEG300 and mix evenly; then add 50 μL of Tween-80 to the above solution and mix evenly; then add 450 μL of normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 3.25 mg/mL (11.08 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 32.5 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 3.25 mg/mL (11.08 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 32.5 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.4088 mL 17.0439 mL 34.0878 mL
5 mM 0.6818 mL 3.4088 mL 6.8176 mL
10 mM 0.3409 mL 1.7044 mL 3.4088 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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