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Thalidomide-O-C8-Boc

Cat No.:V82997 Purity: ≥98%
Thalidomide-O-C8-Boc is a Thalidomide-based cereblon (E3 ligase) ligand that recruits CRBN protein.
Thalidomide-O-C8-Boc
Thalidomide-O-C8-Boc Chemical Structure CAS No.: 2225148-52-5
Product category: PROTAC Linkers
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
250mg
Other Sizes
Official Supplier of:
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Product Description
Thalidomide-O-C8-Boc is a Thalidomide-based cereblon (E3 ligase) ligand that recruits CRBN protein. Thalidomide-O-C8-Boc can be conjugated to the ligand of a target protein through a linker to form a PROTAC molecule.
Thalidomide-O-C8-Boc is a Thalidomide-based cereblon (E3 ligase) ligand that recruits CRBN protein. It can be conjugated to the ligand of a target protein through a linker to form a PROTAC molecule. The Boc group protects the terminal amine for controlled synthesis.
Biological Activity I Assay Protocols (From Reference)
Targets
Cereblon
CRBN (cereblon), an E3 ubiquitin ligase.
ln Vitro
As a cereblon-binding ligand, Thalidomide-O-C8-Boc binds to CRBN and promotes the recruitment of the E3 ubiquitin ligase complex, facilitating the ubiquitination and degradation of target proteins when incorporated into a PROTAC molecule.
ln Vivo
No specific in vivo activity has been reported for this ligand alone; its in vivo effects are observed only after conjugation with a target protein ligand to form a complete PROTAC molecule.
Enzyme Assay
N/A; as a ligand, its binding affinity to cereblon is typically determined using biophysical methods such as surface plasmon resonance or cellular assays with complete PROTAC constructs.
Cell Assay
N/A; this ligand is not evaluated alone in cell-based assays but is used as a building block to construct cereblon-recruiting PROTACs for cellular degradation studies.
Animal Protocol
N/A; no animal studies are performed with the ligand alone.
ADME/Pharmacokinetics
This compound has a molecular weight of 486.56 and is typically stored as a powder at -20degC. The eight-carbon alkyl spacer provides appropriate distance between the cereblon ligand and the conjugated target ligand in PROTAC molecules.
Toxicity/Toxicokinetics
This product is for laboratory research use only and is not for human therapeutic or clinical applications. Standard chemical safety precautions should be observed during handling.
References

[1]. Degraders of wee1 kinase. WO2020069105A1.

Additional Infomation
The Boc-protected ligand can be deprotected under acidic conditions to reveal a free amine for subsequent conjugation to target protein ligands containing carboxylic acids, making it a valuable building block for PROTAC development in targeted protein degradation research.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C26H34N2O7
Molecular Weight
486.557367801666
Exact Mass
486.236
CAS #
2225148-52-5
PubChem CID
146454256
Appearance
White to off-white solid powder
LogP
3.6
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
7
Rotatable Bond Count
13
Heavy Atom Count
35
Complexity
819
Defined Atom Stereocenter Count
0
SMILES
CC(C)(C)OC(=O)CCCCCCCCOC1=CC=CC2=C1C(=O)N(C2=O)C3CCC(=O)NC3=O
InChi Key
XHFRZVFJJQOBAQ-UHFFFAOYSA-N
InChi Code
InChI=1S/C26H34N2O7/c1-26(2,3)35-21(30)13-8-6-4-5-7-9-16-34-19-12-10-11-17-22(19)25(33)28(24(17)32)18-14-15-20(29)27-23(18)31/h10-12,18H,4-9,13-16H2,1-3H3,(H,27,29,31)
Chemical Name
tert-butyl 9-[2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindol-4-yl]oxynonanoate
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO :~100 mg/mL (~205.52 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (5.14 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (5.14 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (5.14 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.0552 mL 10.2762 mL 20.5524 mL
5 mM 0.4110 mL 2.0552 mL 4.1105 mL
10 mM 0.2055 mL 1.0276 mL 2.0552 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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