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2,3-Bis(3-indolylmethyl)indole

Cat No.:V81940 Purity: ≥98%
2,3-Bis(3-indolylmethyl)indole significantly inhibited RANKL-induced osteoclast formation, actin ring formation, and bone resorption in a concentration-dependent fashion.
2,3-Bis(3-indolylmethyl)indole
2,3-Bis(3-indolylmethyl)indole Chemical Structure CAS No.: 138250-72-3
Product category: Endogenous Metabolite
This product is for research use only, not for human use. We do not sell to patients.
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1mg
5mg
10mg
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Product Description
2,3-Bis(3-indolylmethyl)indole significantly inhibited RANKL-induced osteoclast formation, actin ring formation, and bone resorption in a concentration-dependent fashion.
2,3-Bis(3-indolylmethyl)indole (CAS: 138250-72-3) is a bisindole natural product derivative. It is a small molecule that inhibits osteoclast formation and bone resorption, and also exhibits cytotoxic, antimicrobial, and anti-inflammatory activities.
Biological Activity I Assay Protocols (From Reference)
Targets
RANKL-induced osteoclast differentiation pathways and cytoskeletal organization. The compound significantly inhibits RANKL-induced osteoclast formation, actin ring formation, and bone resorption in a concentration-dependent manner, likely by interfering with NF-kappaB and MAPK signaling.
ln Vitro
In vitro, 2,3-Bis(3-indolylmethyl)indole (1-20 uM) inhibits RANKL-induced osteoclastogenesis in primary bone marrow macrophages and RAW 264.7 cells. It reduces TRAP-positive multinucleated cell number, actin ring formation, and bone resorption pit area. It also shows cytotoxicity against certain cancer cell lines.
ln Vivo
In vivo activity data are not publicly available. Given its mechanism, the compound is predicted to inhibit ovariectomy-induced bone loss in rodent models of osteoporosis if administered orally or intraperitoneally. It may also reduce tumor growth in xenograft models.
Enzyme Assay
A non-cell assay for NF-kappaB inhibition is performed using an EMSA or luciferase reporter. The compound is added to nuclear extracts from RANKL-stimulated cells; it reduces NF-kappaB DNA binding activity. Alternatively, direct antioxidant activity can be measured by DPPH radical scavenging.
Cell Assay
Primary bone marrow-derived macrophages (BMMs) are seeded in 96-well plates and treated with RANKL (50 ng/mL) and M-CSF (30 ng/mL) with or without the compound (0.1-20 uM) for 5-7 days. Cells are fixed and stained for TRAP. TRAP-positive multinucleated cells (>3 nuclei) are counted as osteoclasts.
Animal Protocol
No published animal data. In a typical study, ovariectomized mice would be treated with the compound by oral gavage (10-50 mg/kg/day) for 4-6 weeks. Bone mineral density would be measured by micro-CT, and serum TRAP5b and CTX-1 would be assessed as bone resorption markers.
ADME/Pharmacokinetics
The compound is lipophilic (MW 375.47, LogP ~4). It has good solubility in DMSO (100 mg/mL) but poor aqueous solubility. For oral administration, formulation in oil or a surfactant (e.g., Cremophor EL) would be required to enhance absorption.
Toxicity/Toxicokinetics
No detailed toxicity data are available. As an inhibitor of osteoclast formation, potential on-target effects on the immune system (e.g., macrophage function) are possible. The compound should be handled with care as a chemical reagent. No acute toxicity reported at concentrations up to 20 uM in cell culture.
References

[1]. Anti-osteoclastogenic Effects of Indole Alkaloids Isolated from Barley (Hordeum vulgare Var. Hexastichon) Grass. J Agric Food Chem. 2021 Nov 10;69(44):12994-13005.

Additional Infomation
The structure is described in the first document; it is found in edible cruciferous vegetables.
2,3-Bis(3-indolylmethyl)indole is a chemical probe for studying osteoclast biology and bone resorption. It has potential research applications in osteoporosis and cancer metastasis to bone. It is for research use only, not for human therapy. Store at 4degC protected from light.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C26H21N3
Molecular Weight
375.47
Exact Mass
375.174
CAS #
138250-72-3
PubChem CID
132142
Appearance
Light yellow to light brown solid powder
Density
1.314g/cm3
Boiling Point
682.1ºC at 760mmHg
Flash Point
306.6ºC
Vapour Pressure
1.09E-17mmHg at 25°C
Index of Refraction
1.796
LogP
6.312
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
0
Rotatable Bond Count
4
Heavy Atom Count
29
Complexity
564
Defined Atom Stereocenter Count
0
SMILES
C1=CC=C2C(=C1)C(=CN2)CC3=C(NC4=CC=CC=C43)CC5=CNC6=CC=CC=C65
InChi Key
MJHVZTDHBWQIMN-UHFFFAOYSA-N
InChi Code
InChI=1S/C26H21N3/c1-4-10-23-19(7-1)17(15-27-23)13-22-21-9-3-6-12-25(21)29-26(22)14-18-16-28-24-11-5-2-8-20(18)24/h1-12,15-16,27-29H,13-14H2
Chemical Name
2,3-bis(1H-indol-3-ylmethyl)-1H-indole
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO :~100 mg/mL (~266.33 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (6.66 mM) (saturation unknown) in 10% DMSO + 40% PEG300 +5% Tween-80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 + to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.6633 mL 13.3166 mL 26.6333 mL
5 mM 0.5327 mL 2.6633 mL 5.3267 mL
10 mM 0.2663 mL 1.3317 mL 2.6633 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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