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Coumalic acid

Coumalic acid is a valuable platform compound that can be prepared from malic acid.
Coumalic acid
Coumalic acid Chemical Structure CAS No.: 500-05-0
Product category: Biochemical Assay Reagents
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
10g
25g
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Product Description
Coumalic acid is a valuable platform compound that can be prepared from malic acid. Coumalic acid may be used in the flavoring, fragrance and cosmetic industries as a polymer component and as an active molecular scaffold with anti-bronchial and malarial activity.
Coumalic acid (CAS#: 500-05-0) is a valuable platform compound that can be prepared from malic acid. It has the molecular formula C6H4O4 and a molecular weight of 140.09 g/mol. The compound is an inhibitor of human carbonic anhydrase (hCA), with a KI of 0.073 μM for hCA IX and 0.083 μM for hCA XII. It displays antibronchial and antimalarial activity. The compound may be used in the flavoring, fragrance, and cosmetic industries as a polymer component and as an active molecular scaffold with anti-bronchial and malarial activity. p-Coumaric acid, a related compound, has been shown to possess strong antioxidant activity, which could be beneficial in cardiovascular and neurodegenerative diseases. The compound is a derivative of coumarin and is of significant interest due to its diverse biological activities and potential applications in various fields.
Biological Activity I Assay Protocols (From Reference)
Targets
Coumalic acid functions as an inhibitor of human carbonic anhydrase (hCA), with a KI of 0.073 μM for hCA IX and 0.083 μM for hCA XII. Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide to bicarbonate and protons. They are involved in various physiological processes, including pH regulation, fluid secretion, and CO2 transport. Inhibition of carbonic anhydrase is being investigated for the treatment of various diseases, including cancer, glaucoma, and epilepsy. The compound's higher affinity for hCA IX and XII, which are tumor-associated carbonic anhydrases, suggests potential as an anticancer agent. The compound also displays antibronchial and antimalarial activity, suggesting that it may target pathways involved in bronchial inflammation and malaria parasite survival.
ln Vitro
In vitro, coumalic acid is an inhibitor of human carbonic anhydrase, with a KI of 0.073 μM for hCA IX and 0.083 μM for hCA XII. It displays antibronchial and antimalarial activity. The compound is a valuable platform compound that can be prepared from malic acid. It may be used in the flavoring, fragrance, and cosmetic industries as a polymer component and as an active molecular scaffold. In medicinal chemistry, it serves as a building block for constructing biologically active molecules. Its coumarin-like structure provides a scaffold for the synthesis of various derivatives with potential biological activity.
ln Vivo
In vivo, coumalic acid displays antibronchial and antimalarial activity. This suggests that the compound or its derivatives may have therapeutic potential for the treatment of bronchial conditions and malaria. However, specific in vivo studies on the compound are limited. The compound's carbonic anhydrase inhibitory activity suggests potential for in vivo evaluation in cancer models, but comprehensive studies have not been performed.
Enzyme Assay
Cell-free assays for coumalic acid involve studying its carbonic anhydrase inhibitory activity. The compound is incubated with human carbonic anhydrase enzymes (hCA IX and hCA XII) and a suitable substrate, and enzymatic activity is measured spectrophotometrically or fluorometrically. The compound's KI values of 0.073 μM for hCA IX and 0.083 μM for hCA XII are determined. The compound's antibronchial and antimalarial activities can be assessed using relevant biochemical assays. Its antioxidant activity can be assessed using standard antioxidant assays such as DPPH or ABTS.
Cell Assay
Cellular assays for coumalic acid involve testing its activity in cell-based systems. For carbonic anhydrase inhibition, cancer cell lines expressing hCA IX or XII are treated with the compound, and cell viability, proliferation, and pH regulation are assessed. For antimalarial activity, Plasmodium cultures are treated with the compound, and parasite growth inhibition is measured. For antibronchial activity, bronchial epithelial cells or smooth muscle cells are treated with the compound, and inflammatory markers or contractility are assessed. The compound's antioxidant activity can be assessed in cell-based oxidative stress models.
Animal Protocol
Animal studies for coumalic acid are limited. The compound's antibronchial and antimalarial activities suggest potential for in vivo evaluation in animal models of bronchial inflammation and malaria. Its carbonic anhydrase inhibitory activity suggests potential for in vivo evaluation in cancer models. However, specific in vivo studies on the compound are not extensively documented.
ADME/Pharmacokinetics
Pharmacokinetic data for coumalic acid are not well characterized. As a small polar molecule with a molecular weight of 140.09 g/mol, it is expected to have moderate bioavailability if administered. However, comprehensive pharmacokinetic studies, including absorption, distribution, metabolism, and excretion, have not been performed. For research purposes, the compound is typically handled as a neat chemical and not administered to living organisms for pharmacokinetic profiling.
Toxicity/Toxicokinetics
Toxicological data for coumalic acid are limited. Standard safety precautions for handling carboxylic acids and coumarin derivatives apply, including the use of personal protective equipment such as gloves and safety goggles. The compound should be handled in a well-ventilated area, and contact with skin and eyes should be avoided. In case of exposure, affected areas should be rinsed thoroughly with water. The compound is not classified as a carcinogen or mutagen based on available data, but comprehensive toxicological evaluation has not been performed. As with all research chemicals, it should be handled with care and used only in accordance with safety guidelines.
References

[1]. Flow synthesis of coumalic acid and its derivatization. Department of Chemistry. 2018, 3: 722-732.

Additional Infomation
Coumalic acid is a pyranone.
Coumalic acid is a research chemical, not an approved drug. It has no clinical trial or marketing approval status for therapeutic use. The compound is an inhibitor of human carbonic anhydrase, with a KI of 0.073 μM for hCA IX and 0.083 μM for hCA XII. It displays antibronchial and antimalarial activity. The compound may be used in the flavoring, fragrance, and cosmetic industries as a polymer component and as an active molecular scaffold. It is a valuable platform compound that can be prepared from malic acid. It is supplied with a purity of ≥97.65% and should be stored in a cool, dry place. p-Coumaric acid, a related compound, has been shown to possess strong antioxidant activity.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C6H4O4
Molecular Weight
140.09
Exact Mass
140.01
CAS #
500-05-0
PubChem CID
68141
Appearance
Light yellow to brown solid powder
Density
1.5±0.1 g/cm3
Boiling Point
282.4±0.0 °C at 760 mmHg
Melting Point
203-205 °C (dec.)(lit.)
Flash Point
137.3±19.4 °C
Vapour Pressure
0.0±1.2 mmHg at 25°C
Index of Refraction
1.577
LogP
-0.43
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
1
Heavy Atom Count
10
Complexity
236
Defined Atom Stereocenter Count
0
SMILES
C1=CC(=O)OC=C1C(=O)O
InChi Key
ORGPJDKNYMVLFL-UHFFFAOYSA-N
InChi Code
InChI=1S/C6H4O4/c7-5-2-1-4(3-10-5)6(8)9/h1-3H,(H,8,9)
Chemical Name
6-oxopyran-3-carboxylic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 250 mg/mL (1784.57 mM)
H2O: 2 mg/mL (14.28 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.08 mg/mL (14.85 mM) (saturation unknown) in 10% DMSO + 40% PEG300 +5% Tween-80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 + to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 7.1383 mL 35.6913 mL 71.3827 mL
5 mM 1.4277 mL 7.1383 mL 14.2765 mL
10 mM 0.7138 mL 3.5691 mL 7.1383 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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