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1-Boc-homopiperazine

Cat No.:V68894 Purity: ≥98%
1-Boc-homopiperazine is a biochemical compound that may be utilized as a biomaterial or organic/chemical reagent for biomedical research.
1-Boc-homopiperazine
1-Boc-homopiperazine Chemical Structure CAS No.: 112275-50-0
Product category: Biochemical Assay Reagents
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
1-Boc-homopiperazine is a biochemical compound that may be utilized as a biomaterial or organic/chemical reagent for biomedical research.
1-Boc-homopiperazine (tert-Butyl 1,4-diazepane-1-carboxylate) (CAS 112275-50-0) is a Boc-protected homopiperazine derivative with molecular formula C₁₀H₂₀N₂O₂ and molecular weight 200.28 g/mol. It is a biochemical reagent that can be used as a biomaterial for life science related research and as a sulfonylation reagent for organic synthesis and drug discovery. The compound is a valuable drug intermediate utilized in the synthesis of bacterial FtsZ inhibitors.
Biological Activity I Assay Protocols (From Reference)
Targets
1-Boc-homopiperazine is a drug intermediate used for the synthesis of bacterial FtsZ inhibitors. FtsZ is a protein essential for bacterial cell division, and its inhibition represents a novel strategy for antimicrobial therapy. The compound is also a molecule inhibitor of carboxylic acid reductase involved in the regulation of cellular pH and has been shown to be effective against bladder cancer cells.
ln Vitro
In vitro, 1-Boc-homopiperazine is primarily used as a chemical reagent and synthetic intermediate. It is a valuable drug intermediate utilized in the synthesis of bacterial FtsZ inhibitors, playing a critical role in disrupting bacterial cell division. The compound is also used as a sulfonylation reagent for organic synthesis and drug discovery. It has been shown to be effective against bladder cancer cells.
ln Vivo
In vivo data for 1-Boc-homopiperazine as a therapeutic agent are limited. The compound is a synthetic intermediate used in the development of bacterial FtsZ inhibitors and other pharmaceuticals. Its in vivo relevance is primarily indirect, through the biological activities of the final pharmaceutical compounds derived from its homopiperazine scaffold. Specific in vivo efficacy and pharmacokinetic data for the parent compound are not well-documented.
Enzyme Assay
For in vitro enzyme/receptor binding studies, 1-Boc-homopiperazine derivatives are evaluated for FtsZ inhibitory activity. Standard protocols involve incubating the compound with recombinant FtsZ protein and measuring its effect on FtsZ polymerization using light scattering or GTPase activity assays. IC₅₀ values are calculated from dose-response curves. The compound's ability to inhibit bacterial cell division can be assessed.
Cell Assay
For in vitro cell-based experiments, 1-Boc-homopiperazine is used as an intermediate in the synthesis of compounds that are tested in cell viability, proliferation, and cytotoxicity assays. The compound itself is not typically evaluated in cell-based assays. Standard cell culture protocols for test compounds synthesized from this intermediate involve dissolving the final product in DMSO and diluting to working concentrations in appropriate cell culture medium.
Animal Protocol
In vivo animal studies using 1-Boc-homopiperazine are conducted on the final drug compounds synthesized from it, not on the intermediate itself. For antibacterial agents derived from this building block, efficacy studies would typically be performed in mouse models of bacterial infection. Standard in vivo protocols involve administration to rodents via oral gavage or intraperitoneal injection, with measurement of bacterial burden in target organs.
ADME/Pharmacokinetics
Pharmacokinetic properties of 1-Boc-homopiperazine as a standalone compound are not characterized in the literature. The compound has a molecular weight of 200.28 g/mol, which is favorable for oral bioavailability. The Boc group may be cleaved in vivo to release the free amine. The compound's properties allow it to improve the solubility and absorption of active pharmaceutical ingredients. Empirical pharmacokinetic data are not available.
Toxicity/Toxicokinetics
1-Boc-homopiperazine is a research chemical and should be handled with appropriate laboratory safety precautions. As a piperazine derivative, it may cause skin and eye irritation. The compound is for research use only and not for human therapeutic or diagnostic applications. Specific LD₅₀ values, acute toxicity classifications, and chronic toxicity data are not available in the public literature. Standard safety practices include the use of personal protective equipment and working in a fume hood.
References

[1]. Efficient Synthesis of Amine-Linked 2,4,6-Trisubstituted Pyrimidines as a New Class of Bacterial FtsZ Inhibitors. ACS Omega. 2017 Oct 31;2(10):7281-7292.

Additional Infomation
1-Boc-homopiperazine (tert-Butyl 1,4-diazepane-1-carboxylate, CAS 112275-50-0) is primarily a research-grade chemical intermediate, not an FDA-approved pharmaceutical drug. Its primary applications are as a drug intermediate for the synthesis of bacterial FtsZ inhibitors and as a sulfonylation reagent for organic synthesis and drug discovery. The compound has shown effectiveness against bladder cancer cells. No clinical trials or approved indications exist.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C10H20N2O2
Molecular Weight
200.28
Exact Mass
200.152
CAS #
112275-50-0
PubChem CID
2756058
Appearance
Colorless to white liquid
Density
1.0±0.1 g/cm3
Boiling Point
277.9±23.0 °C at 760 mmHg
Flash Point
121.9±22.6 °C
Vapour Pressure
0.0±0.6 mmHg at 25°C
Index of Refraction
1.464
LogP
0.94
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
3
Rotatable Bond Count
2
Heavy Atom Count
14
Complexity
199
Defined Atom Stereocenter Count
0
SMILES
O(C(N1C([H])([H])C([H])([H])N([H])C([H])([H])C([H])([H])C1([H])[H])=O)C(C([H])([H])[H])(C([H])([H])[H])C([H])([H])[H]
InChi Key
WDPWEXWMQDRXAL-UHFFFAOYSA-N
InChi Code
InChI=1S/C10H20N2O2/c1-10(2,3)14-9(13)12-7-4-5-11-6-8-12/h11H,4-8H2,1-3H3
Chemical Name
tert-butyl 1,4-diazepane-1-carboxylate
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: ≥ 100 mg/mL (~499.3 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (12.48 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween-80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), Clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of DMSO stock solution (25.0 mg/mL) to 400 μL of PEG300 and mix well; then add 50 μL of Tween-80 and mix well; finally add 450 μL of physiological saline and adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 4.9930 mL 24.9650 mL 49.9301 mL
5 mM 0.9986 mL 4.9930 mL 9.9860 mL
10 mM 0.4993 mL 2.4965 mL 4.9930 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration: mg/mL;

Method for preparing DMSO stock solution: mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation::Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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