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6-Hydroxyindole

6-Hydroxyindole is a biochemical compound that may be utilized as a biomaterial or organic/chemical reagent for biomedical research.
6-Hydroxyindole
6-Hydroxyindole Chemical Structure CAS No.: 2380-86-1
Product category: Biochemical Assay Reagents
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5g
10g
Other Sizes
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Product Description
6-Hydroxyindole is a biochemical compound that may be utilized as a biomaterial or organic/chemical reagent for biomedical research.
6-Hydroxyindole (1H-indol-6-ol) (CAS 2380-86-1) is a hydroxylated indole derivative with molecular formula C₈H₇NO and molecular weight 133.15 g/mol. It appears as a solid and is a biochemical reagent that serves as an endogenous long-lasting OATP1B1 inhibitor. The compound is a validated pharmacophore with an 18.3-fold potency advantage over 5-hydroxyindole (IC₅₀ 20 µM vs 366 µM) against human tyrosinase.
Biological Activity I Assay Protocols (From Reference)
Targets
6-Hydroxyindole is an endogenous potent and long-lasting inhibitor of the organic anion transporting polypeptide 1B1 (OATP1B1) with an IC₅₀ of approximately 10 µM in cell-free assays. OATP1B1 is a hepatic uptake transporter involved in the disposition of many drugs and endogenous compounds. The compound also inhibits human tyrosinase with an IC₅₀ of 20 µM.
ln Vitro
In vitro, 6-hydroxyindole is used as a biochemical reagent and research tool. It serves as a long-lasting inhibitor of OATP1B1 and is used to study transporter-mediated drug uptake. The compound shows potent inhibition of human tyrosinase, making it useful for studying melanin biosynthesis. It is also a reactant for the asymmetric synthesis of notoamide J and for preparing indole oxyacetic acid derivatives as PPAR agonists.
ln Vivo
In vivo data for 6-hydroxyindole as a therapeutic agent are limited. As an endogenous OATP1B1 inhibitor, it may play a role in modulating drug disposition in vivo. The compound is elevated in the plasma of renal failure patients, suggesting a potential role as a biomarker. Specific in vivo pharmacokinetic and pharmacodynamic data are not well-documented.
Enzyme Assay
For in vitro transporter inhibition assays, 6-hydroxyindole is evaluated for OATP1B1 inhibitory activity. Standard protocols involve using OATP1B1-overexpressing cells or membrane vesicles and measuring the uptake of a fluorescent or radiolabeled substrate (e.g., estradiol-17β-glucuronide) in the presence of the compound. IC₅₀ values are calculated from dose-response curves. The compound shows an IC₅₀ of approximately 10 µM.
Cell Assay
For in vitro cell-based experiments, 6-hydroxyindole is evaluated for tyrosinase inhibitory activity. Tyrosinase enzyme assays are performed using L-DOPA or tyrosine as substrate, and the production of dopachrome is monitored spectrophotometrically at 475 nm. The compound shows an IC₅₀ of 20 µM against human tyrosinase. The compound can also be used in melanocyte cell culture studies to assess effects on melanin production.
Animal Protocol
In vivo animal studies for 6-hydroxyindole are limited. The compound may be used in pharmacokinetic studies to assess its effects on OATP1B1-mediated drug disposition. Standard in vivo protocols involve administration to rodents via oral gavage or intravenous injection, with measurement of plasma concentrations of OATP1B1 substrates. Specific protocols for this compound are not well-documented.
ADME/Pharmacokinetics
Metabolism / Metabolites
6-Hydroxyindole is a known human indole metabolite.
Pharmacokinetic properties of 6-hydroxyindole are not extensively characterized. The compound has a molecular weight of 133.15 g/mol, which is favorable for oral bioavailability. As an endogenous compound, it is likely subject to metabolic conjugation (e.g., glucuronidation, sulfation) and renal excretion. The compound is elevated in the plasma of renal failure patients, suggesting renal clearance is a major elimination pathway.
Toxicity/Toxicokinetics
Toxicity Summary
It is safe at the current usage and concentration. Ingredient, concentration, and usage information can be found at: https://cir-reports.cir-safety.org
6-Hydroxyindole is a research chemical and should be handled with appropriate laboratory safety precautions. As an indole derivative, it may cause skin and eye irritation. The compound is for research use only and not for human therapeutic or diagnostic applications. Specific LD₅₀ values, acute toxicity classifications, and chronic toxicity data are not available in the public literature. Standard safety practices include the use of personal protective equipment and working in a fume hood.
References

[1]. 6-Hydroxyindole is an endogenous long-lasting OATP1B1 inhibitor elevated in renal failure patients. Drug Metab Pharmacokinet. 2020 Dec;35(6):555-562.

Additional Infomation
Structure in the first source
6-Hydroxyindole (1H-indol-6-ol, CAS 2380-86-1) is primarily a research-grade biochemical reagent, not an FDA-approved pharmaceutical drug. Its primary applications are as an endogenous OATP1B1 inhibitor for transporter studies and as a tyrosinase inhibitor for melanin biosynthesis research. The compound is also used as a reactant in organic synthesis. No clinical trials or approved indications exist for this compound.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C8H7NO
Molecular Weight
133.15
Exact Mass
133.052
CAS #
2380-86-1
PubChem CID
524508
Appearance
Off-white to yellow solid powder
Density
1.3±0.1 g/cm3
Boiling Point
343.2±15.0 °C at 760 mmHg
Melting Point
124-130 °C
Flash Point
161.4±20.4 °C
Vapour Pressure
0.0±0.8 mmHg at 25°C
Index of Refraction
1.739
LogP
1.41
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
1
Rotatable Bond Count
0
Heavy Atom Count
10
Complexity
126
Defined Atom Stereocenter Count
0
SMILES
C1=CC(=CC2=C1C=CN2)O
InChi Key
XAWPKHNOFIWWNZ-UHFFFAOYSA-N
InChi Code
InChI=1S/C8H7NO/c10-7-2-1-6-3-4-9-8(6)5-7/h1-5,9-10H
Chemical Name
1H-indol-6-ol
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 100 mg/mL (751.03 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (18.78 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (18.78 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (18.78 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 7.5103 mL 37.5516 mL 75.1033 mL
5 mM 1.5021 mL 7.5103 mL 15.0207 mL
10 mM 0.7510 mL 3.7552 mL 7.5103 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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