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Diethyl (cyanomethyl)phosphonate

Diethyl (cyanomethyl)phosphonate is a biochemical compound that could be utilized as a biomaterial or organic/chemical reagent for biomedical research.
Diethyl (cyanomethyl)phosphonate
Diethyl (cyanomethyl)phosphonate Chemical Structure CAS No.: 2537-48-6
Product category: Biochemical Assay Reagents
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
Diethyl (cyanomethyl)phosphonate is a biochemical compound that could be utilized as a biomaterial or organic/chemical reagent for biomedical research.
Diethyl (cyanomethyl)phosphonate (Diethyl cyanomethylphosphonate, CAS 2537-48-6) is an organophosphorus compound with molecular formula C₆H₁₂NO₃P and molecular weight 177.14 g/mol. It is a biochemical reagent that can be used as a biomaterial or organic/chemical reagent for biomedical research. It is used as an intermediate in the Horner-Emmons reaction.
Biological Activity I Assay Protocols (From Reference)
Targets
Diethyl (cyanomethyl)phosphonate does not have a defined pharmacological target. It is a modified Wittig reagent used in the preparation of alpha, beta-unsaturated nitriles from ketones or aldehydes. Its mechanism of action is chemical: the phosphonate undergoes the Horner-Emmons reaction to form carbon-carbon double bonds. The compound can also be used to inhibit and/or prevent the growth of undesirable algae, bacteria, fungi, yeast, and other microorganisms.
ln Vitro
In vitro, diethyl (cyanomethyl)phosphonate is used as a chemical reagent and synthetic intermediate. It is used as an intermediate in the Horner-Emmons reaction for the synthesis of substituted nitriles and their amide and heterocyclic derivatives. The compound is a modified Wittig reagent used in the preparation of alpha, beta-unsaturated nitriles from ketones or aldehydes.
ln Vivo
In vivo activity data for diethyl (cyanomethyl)phosphonate are not available, as the compound is a chemical reagent used for in vitro synthesis. It is not intended for in vivo administration and has no established in vivo pharmacokinetic or pharmacodynamic profile. The compound is not designed for therapeutic use.
Enzyme Assay
For in vitro chemical synthesis, diethyl (cyanomethyl)phosphonate is used as a reagent in the Horner-Emmons reaction. Standard protocols involve deprotonating the phosphonate with a base (e.g., NaH, LDA) to form the phosphonate carbanion, which then reacts with an aldehyde or ketone to form the corresponding alpha, beta-unsaturated nitrile. The reaction is typically carried out in an anhydrous solvent (e.g., THF) at low temperature, and the product is isolated by standard workup procedures.
Cell Assay
For in vitro cell-based experiments, diethyl (cyanomethyl)phosphonate is not typically used directly in cell culture. It is a chemical reagent used for organic synthesis. The compound may be used in the synthesis of compounds that are subsequently tested in cell-based assays, but it is not added directly to cell cultures as a test compound.
Animal Protocol
In vivo animal studies for diethyl (cyanomethyl)phosphonate are not applicable, as the compound is a chemical reagent used for organic synthesis. No animal studies have been conducted for this compound as a therapeutic agent, and it is not intended for diagnostic or therapeutic use in animals or humans.
ADME/Pharmacokinetics
Pharmacokinetic data for diethyl (cyanomethyl)phosphonate are not available, as the compound is not a drug and is not administered to living organisms. The compound has a molecular weight of 177.14 g/mol. As an organophosphorus compound, it would be expected to be hydrolyzed or metabolized in biological systems. The compound is primarily used as a reagent rather than as a drug candidate.
Toxicity/Toxicokinetics
Diethyl (cyanomethyl)phosphonate is a research chemical and should be handled with appropriate laboratory safety precautions. As an organophosphorus compound, it may cause skin and eye irritation. The compound is for research use only and not for human therapeutic or diagnostic applications. Specific LD₅₀ values, acute toxicity classifications, and chronic toxicity data are not available in the public literature. Standard safety practices include the use of personal protective equipment and working in a fume hood.
Additional Infomation
Diethyl (cyanomethyl)phosphonate (Diethyl cyanomethylphosphonate, CAS 2537-48-6) is primarily a research-grade chemical reagent, not an FDA-approved pharmaceutical drug. Its primary applications are as an intermediate in the Horner-Emmons reaction for the synthesis of substituted nitriles and heterocyclic derivatives and as a modified Wittig reagent. No clinical trials or approved therapeutic indications exist.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C6H12NO3P
Molecular Weight
177.14
Exact Mass
177.055
CAS #
2537-48-6
PubChem CID
75676
Appearance
Colorless to light yellow liquid(Density:1.1264 g/cm³)
Density
1.1±0.1 g/cm3
Boiling Point
305.2±0.0 °C at 760 mmHg
Flash Point
117.3±22.6 °C
Vapour Pressure
0.0±0.6 mmHg at 25°C
Index of Refraction
1.422
LogP
-0.24
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
5
Heavy Atom Count
11
Complexity
185
Defined Atom Stereocenter Count
0
SMILES
CCOP(=O)(CC#N)OCC
InChi Key
KWMBADTWRIGGGG-UHFFFAOYSA-N
InChi Code
InChI=1S/C6H12NO3P/c1-3-9-11(8,6-5-7)10-4-2/h3-4,6H2,1-2H3
Chemical Name
2-diethoxyphosphorylacetonitrile
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 100 mg/mL (564.53 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (14.11 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (14.11 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (14.11 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 5.6453 mL 28.2263 mL 56.4525 mL
5 mM 1.1291 mL 5.6453 mL 11.2905 mL
10 mM 0.5645 mL 2.8226 mL 5.6453 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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