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7-Azaindole

Cat No.:V66199 Purity: ≥98%
1H-Pyrrolo[2,3-b]pyridine is a biochemical compound that may be utilized as a biomaterial or organic/chemical reagent for biomedical research.
7-Azaindole
7-Azaindole Chemical Structure CAS No.: 271-63-6
Product category: Biochemical Assay Reagents
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
1H-Pyrrolo[2,3-b]pyridine is a biochemical compound that may be utilized as a biomaterial or organic/chemical reagent for biomedical research.
7-Azaindole (CAS 271-63-6) is a heterocyclic compound with molecular formula C7H6N2 and molecular weight 118.14. It is a bicyclic aromatic compound consisting of a pyridine ring fused to a pyrrole ring, also known as 1H-pyrrolo[2,3-b]pyridine. This compound appears as a white to off-white crystalline solid. 7-Azaindole is an important scaffold in medicinal chemistry and drug discovery, serving as a bioisostere for indole. It is used as a building block for the synthesis of various pharmaceutical compounds including kinase inhibitors and other bioactive molecules.
Biological Activity I Assay Protocols (From Reference)
Targets
7-Azaindole does not have a single defined pharmacological target as it is a scaffold compound used in drug discovery. The 7-azaindole core is a privileged structure that can interact with various biological targets including protein kinases, where it can serve as an ATP-binding site mimetic. Compounds containing the 7-azaindole scaffold have been developed as inhibitors of various kinases, including CDK, Aurora, and JAK families. The compound serves as a versatile building block for drug design.
ln Vitro
In vitro activity of 7-azaindole derivatives has been extensively studied in drug discovery. The azaindole core can form hydrogen bonds with kinase hinge regions, making it a valuable scaffold for kinase inhibitor development. The compound itself is used as a starting material for synthesizing libraries of azaindole-based compounds. These derivatives are evaluated in various in vitro assays including kinase inhibition assays, cell proliferation assays, and binding studies against specific molecular targets.
ln Vivo
In vivo activity of 7-azaindole derivatives depends on the specific compound synthesized from this scaffold. Various azaindole-based compounds have been evaluated in animal models for anticancer, anti-inflammatory, and other therapeutic applications. The in vivo activity is assessed based on the specific derivative being studied rather than the parent 7-azaindole. Dosing and administration protocols vary depending on the compound and therapeutic indication.
Enzyme Assay
For non-cellular assays, 7-azaindole is characterized by standard analytical techniques including NMR, HPLC, and mass spectrometry to confirm identity and purity. The compound can be evaluated as a ligand in binding assays or as a substrate in synthetic reactions. Typical protocols involve dissolving the compound in appropriate solvents and analyzing by chromatographic methods. Purity is typically ≥97% to ≥98%. The compound is a solid at room temperature with a melting point typically around 105-108°C.
Cell Assay
For in vitro cell-based studies, 7-azaindole derivatives are dissolved in DMSO and diluted in cell culture medium to appropriate concentrations. Cells are cultured under standard conditions and treated with the compounds for various time points. Cellular responses are assessed using assays for viability, proliferation, apoptosis, or specific signaling pathway markers. The 7-azaindole scaffold is used to generate libraries of compounds that are screened against various cancer cell lines and other disease-relevant cell models.
Animal Protocol
For in vivo animal studies, 7-azaindole derivatives are administered via various routes including oral, intravenous, or intraperitoneal injection depending on the compound and therapeutic application. Dosing solutions are prepared using appropriate vehicles. The compounds are evaluated in animal models of cancer, inflammation, and other diseases. Dosing regimens and administration protocols follow approved animal welfare guidelines and institutional protocols.
ADME/Pharmacokinetics
Pharmacokinetic properties of 7-azaindole derivatives depend on the specific substituents and modifications on the scaffold. The parent compound 7-azaindole has a molecular weight of 118.14. The azaindole core typically provides favorable drug-like properties including the ability to form hydrogen bonds and moderate lipophilicity. Storage: keep in a cool, dry place protected from light and moisture. The compound is stable under recommended storage conditions. Purity: typically ≥97% to ≥98%.
Toxicity/Toxicokinetics
7-Azaindole is generally considered to have low toxicity as a chemical intermediate, but specific toxicological data depend on the derivative being studied. The compound is for research use only and not for human consumption. Standard laboratory safety practices should be followed when handling this chemical. Appropriate personal protective equipment including gloves and safety glasses should be worn. Specific LD50 values for 7-azaindole have not been extensively reported in the literature.
Additional Infomation
1H-pyrrolo[2,3-b]pyridine is a pyrrolopyridine.
7-Azaindole (CAS 271-63-6) is a heterocyclic compound also known as 1H-pyrrolo[2,3-b]pyridine. It is an important scaffold in medicinal chemistry serving as a bioisostere for indole. The 7-azaindole core is used in the synthesis of various kinase inhibitors and other pharmaceutical compounds. It forms hydrogen bonds with kinase hinge regions, making it valuable for drug design. No clinical trials or therapeutic approvals exist for the parent compound; it is a research reagent.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C7H6N2
Molecular Weight
118.14
Exact Mass
118.053
CAS #
271-63-6
Related CAS #
25247-73-8
PubChem CID
9222
Appearance
White to off-white solid powder
Density
1.2±0.1 g/cm3
Boiling Point
283.1±40.0 °C at 760 mmHg
Melting Point
105-107 °C(lit.)
Flash Point
125.0±27.3 °C
Vapour Pressure
0.0±0.6 mmHg at 25°C
Index of Refraction
1.657
LogP
-0.64
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
1
Rotatable Bond Count
0
Heavy Atom Count
9
Complexity
103
Defined Atom Stereocenter Count
0
SMILES
N1([H])C([H])=C([H])C2C([H])=C([H])C([H])=NC1=2
InChi Key
MVXVYAKCVDQRLW-UHFFFAOYSA-N
InChi Code
InChI=1S/C7H6N2/c1-2-6-3-5-9-7(6)8-4-1/h1-5H,(H,8,9)
Chemical Name
1H-pyrrolo[2,3-b]pyridine
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 100 mg/mL (846.45 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (21.16 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (21.16 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (21.16 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 8.4645 mL 42.3227 mL 84.6453 mL
5 mM 1.6929 mL 8.4645 mL 16.9291 mL
10 mM 0.8465 mL 4.2323 mL 8.4645 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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