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3-Indoleacetic acid-d5 (Indole-3-acetic acid-d5; 3-IAA-d5)

Cat No.:V64641 Purity: ≥98%
3-Indoleacetic acid-d5 is the deuterated form of 3-Indoleacetic acid.
3-Indoleacetic acid-d5 (Indole-3-acetic acid-d5; 3-IAA-d5)
3-Indoleacetic acid-d5 (Indole-3-acetic acid-d5; 3-IAA-d5) Chemical Structure CAS No.: 76937-78-5
Product category: Isotope-Labeled Compounds
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
Other Sizes

Other Forms of 3-Indoleacetic acid-d5 (Indole-3-acetic acid-d5; 3-IAA-d5):

  • 3-Indoleacetic acid sodium (Indole-3-acetic acid sodium; 3-IAA sodium)
  • 3-Indoleacetic acid-2,2-d2 (Indole-3-acetic acid-2,2-d2; 3-IAA-2,2-d2)
  • 3-Indoleacetic acid-d4 (3-indoleacetic acid-d4; Indole-3-acetic acid-d4; 3-IAA-d4)
  • 3-Indoleacetic acid-d7 (Indole-3-acetic acid-d7; 3-IAA-d7)
  • 3-Indoleacetic acid
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Top Publications Citing lnvivochem Products
Product Description
3-Indoleacetic acid-d5 is the deuterated form of 3-Indoleacetic acid. 3-Indoleacetic acid-d5 could be utilized as an internal standard for determination of IAA release by alkaline hydrolysis of ester and amide conjugates.
3-Indoleacetic acid-d5 (CAS 76937-78-5) is the deuterium-labeled form of 3-indoleacetic acid (IAA), a naturally occurring plant hormone. Its molecular formula is C₁₀H₄D₅NO₂ with a molecular weight of 180.21 g/mol. The compound contains five deuterium atoms on the indole ring. 3-Indoleacetic acid-d5 is used as an internal standard for the quantification of indoleacetic acid by GC- or LC-MS in plant physiology and biochemical research.
Biological Activity I Assay Protocols (From Reference)
Targets
3-Indoleacetic acid-d5 shares the same molecular target as its non-deuterated form, 3-indoleacetic acid. IAA is a plant hormone (auxin) that regulates plant growth and development, including cell elongation, root initiation, and fruit development. It acts through the TIR1/AFB auxin receptor and the SCF ubiquitin ligase complex. In mammals, IAA is a metabolite of tryptophan. The labeled compound is used as an internal standard for the quantification of IAA in biological samples.
ln Vitro
The deuterated compound itself does not possess intrinsic pharmacological activity in vitro; its biological activity is identical to that of IAA. IAA is a plant hormone that is not pharmacologically active in animals. The labeled compound is used as an internal standard for quantifying IAA in biological samples, not for evaluating its own biological activity. In plant cell culture, IAA is used as a growth regulator.
ln Vivo
3-Indoleacetic acid-d5 is not used as a therapeutic agent; its non-deuterated form, IAA, is a plant hormone. In vivo, IAA is a metabolite of tryptophan in mammals and is excreted in urine. The labeled compound is used in pharmacokinetic and metabolic studies to accurately measure IAA levels in biological samples for research purposes.
Enzyme Assay
In vitro assays for 3-indoleacetic acid-d5 focus on its use as an analytical standard. A standard protocol involves preparing a solution of the compound in an appropriate solvent (e.g., methanol) and using it as an internal standard for LC-MS or GC-MS analysis of IAA in plant tissues, serum, or urine samples. The compound is added to samples before extraction and derivatization procedures. Quantification is performed by monitoring specific mass transitions for the labeled and unlabeled compounds.
Cell Assay
In vitro cell culture experiments are not performed with 3-indoleacetic acid-d5. When studying the effects of IAA in plant cell culture, the non-labeled compound is used. Plant cells are treated with IAA, and growth or gene expression is measured. The labeled compound is used as an internal standard for LC-MS analysis of IAA concentrations in cell culture media or lysates.
Animal Protocol
In vivo animal studies are not conducted with 3-indoleacetic acid-d5. When used in metabolic studies, the labeled compound serves as an internal standard for the quantification of IAA in animal plasma or urine samples.
ADME/Pharmacokinetics
Pharmacokinetic properties of 3-indoleacetic acid-d5 itself are not characterized, as it is not a drug substance. IAA is a metabolite of tryptophan that is excreted in urine. The labeled compound is used as an internal standard for metabolic studies.
Toxicity/Toxicokinetics
3-Indoleacetic acid-d5 is not a therapeutic agent and has not been evaluated for toxicity in humans. IAA is a naturally occurring compound with low toxicity. The labeled compound is for research use only and should be handled with standard laboratory precautions.
References

[1]. Synthesis of 4,5,6,7 and 2,4,5,6,7 Deuterium-labeled Indole-3-Acetic Acid for Use in Mass Spectrometric Assays. Plant Physiol. 1980 Oct; 66(4):775-81.

Additional Infomation
3-Indoleacetic acid-d5 is a stable isotope-labeled internal standard used for the quantification of indoleacetic acid in biological samples. It is also known as 3-IAA-d5. The compound is used in analytical method development, quality control, and plant physiology research.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C10H4D5NO2
Molecular Weight
180.21
Exact Mass
180.095
CAS #
76937-78-5
Related CAS #
3-Indoleacetic acid;87-51-4;3-Indoleacetic acid-d4;76937-77-4
PubChem CID
54301591
Appearance
Off-white to light yellow solid powder
Melting Point
165-169ºC(lit.)
LogP
1.795
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
2
Rotatable Bond Count
2
Heavy Atom Count
13
Complexity
205
Defined Atom Stereocenter Count
0
SMILES
[2H]C1=C(C(=C2C(=C1[2H])C(=C(N2)[2H])CC(=O)O)[2H])[2H]
InChi Key
SEOVTRFCIGRIMH-SNOLXCFTSA-N
InChi Code
InChI=1S/C10H9NO2/c12-10(13)5-7-6-11-9-4-2-1-3-8(7)9/h1-4,6,11H,5H2,(H,12,13)/i1D,2D,3D,4D,6D
Chemical Name
2-(2,4,5,6,7-pentadeuterio-1H-indol-3-yl)acetic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 100 mg/mL (554.91 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (13.87 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (13.87 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (13.87 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 5.5491 mL 27.7454 mL 55.4908 mL
5 mM 1.1098 mL 5.5491 mL 11.0982 mL
10 mM 0.5549 mL 2.7745 mL 5.5491 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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