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4-Pentynoic acid (4-pentynoic acid; Propargylacetic acid)

Cat No.:V64406 Purity: ≥98%
4-Pentynoic acid (Propargylacetic acid) is an intermediate in the production of bioactive compounds.
4-Pentynoic acid (4-pentynoic acid; Propargylacetic acid)
4-Pentynoic acid (4-pentynoic acid; Propargylacetic acid) Chemical Structure CAS No.: 6089-09-4
Product category: Others 12
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
4-Pentynoic acid (Propargylacetic acid) is an intermediate in the production of bioactive compounds. 4-Pentynoic acid is extensively used as a building block for the synthesis of eight sequence-defined model oligomers. 4-Pentynoic acid is a reagent for click chemistry. It contains Alkyne groups and could undergo CuAAc (copper-catalyzed azide-alkyne cycloaddition reaction) with compounds bearing an Azide group.
4-Pentynoic acid (CAS 6089-09-4), also known as Propargylacetic acid, is a terminal alkynoic acid with the molecular formula C₅H₆O₂ and a molecular weight of 98.10 g/mol. It is a white to off-white crystalline powder with a melting point of 54-57°C. This compound is a natural product and an oxidative metabolite of 4-hydroxybutyrate. It is widely utilized as a building block in organic synthesis, particularly for the production of sequence-defined model oligomers and biologically active compounds. Due to its terminal alkyne group, it is also a valuable reagent for click chemistry, specifically copper-catalyzed azide-alkyne cycloaddition (CuAAc) reactions.
Biological Activity I Assay Protocols (From Reference)
Targets
4-Pentynoic acid does not have a defined pharmacological receptor target in the classical sense. Its primary reported biological activity is as a hypoglycemic agent, which is associated with its ability to elevate hepatic tyrosine aminotransferase and plasma corticosterone levels in rats. It has also been shown to inhibit the growth of prostate cancer cells and to inhibit the production of brain natriuretic peptide (BNP), a predictor of cardiovascular disease. Furthermore, it has regulatory effects on the cellular uptake of calcium carbonate.
ln Vitro
In vitro, 4-Pentynoic acid serves as a key intermediate for producing biologically active compounds. It is used to synthesize ynenol lactones via reactions with 1-bromo-1-alkynes in the presence of a palladium catalyst. It is also employed in the synthesis of cytotoxic macrolides through ring-closing metathesis of bis acetylenes. Its structural similarity to 2,5-dihydroxybenzoic acid allows it to form covalent linkages with iron oxides, leading to particle formation. However, specific IC₅₀ values for its direct activity are not well-characterized in the literature.
ln Vivo
In vivo, 4-Pentynoic acid acts as a hypoglycemic agent, decreasing blood sugar levels in rats. This effect is accompanied by an increase in liver tyrosine aminotransferase activity and plasma corticosterone concentrations. The increase in tyrosine aminotransferase is dependent on the presence of the adrenal glands, as the effect is not observed in adrenalectomized rats. Additionally, it has been reported to inhibit the growth of prostate cancer cells in preclinical models.
Enzyme Assay
The primary non-cellular assay for 4-Pentynoic acid involves measuring its effect on hepatic tyrosine 2-oxoglutarate aminotransferase activity in rat liver homogenates. This assay typically involves administering the compound to rats, sacrificing the animals, and measuring the enzyme activity in liver samples. Other biochemical characterizations include assessing its reactivity in click chemistry applications, such as the CuAAc reaction with azide-bearing compounds. Its ability to form ynenol lactones in palladium-catalyzed reactions can also be used to study its chemical properties.
Cell Assay
No specific cell-based pharmacological assays are routinely performed with 4-Pentynoic acid as a primary test article. However, it may be used as a chemical tool in cell culture to study the effects of its derivatives or as a precursor for synthesizing compounds that are subsequently evaluated for biological activity. Its primary role in a research setting is as a synthetic building block rather than a directly testable pharmacological agent in cell-based assays.
Animal Protocol
In vivo animal studies with 4-Pentynoic acid primarily involve its administration to rats to evaluate its hypoglycemic effects. In these studies, the compound is typically administered, and subsequent measurements are taken for blood glucose levels, liver tyrosine aminotransferase activity, and plasma corticosterone concentrations. Such experiments have demonstrated that 4-Pentynoic acid decreases blood sugar while increasing liver enzyme activity and plasma corticosterone. The effect on tyrosine aminotransferase is dependent on the presence of the adrenal glands.
ADME/Pharmacokinetics
Specific pharmacokinetic (PK) data for 4-Pentynoic acid are not well-documented in the available literature. As a small, polar, water-soluble carboxylic acid (LogP ~0.43), it is expected to be readily absorbed and distributed. It is soluble in water and low-polarity organic solvents. For in vivo formulation, it can be dissolved in a mixture of 10% DMSO, 40% PEG300, 5% Tween 80, and 45% saline. However, comprehensive PK parameters such as half-life, volume of distribution, and clearance have not been reported.
Toxicity/Toxicokinetics
4-Pentynoic acid is classified as a corrosive material and poses significant health hazards. It causes severe skin burns and eye damage (H314). It is harmful if swallowed, in contact with skin, or if inhaled (H302, H312, H332). It may also cause respiratory irritation. Symptoms of overexposure may include headache, dizziness, tiredness, nausea, and vomiting. Appropriate personal protective equipment, including gloves and eye/face protection, should be worn when handling this compound.
References
[1]. Elgafi, et al. Cyclization of acetylenic carboxylic acids and acetylenic alcohols to oxygen-containing heterocycles using cationic rhodium(I) complexes. Journal of Organometallic Chemistry.Volume: 607.Issue: 1-2.Pages: 97-104.Journal 2000.
Additional Infomation
structure
4-Pentynoic acid is a research chemical and is not an approved pharmaceutical drug. Its primary value lies in its role as a versatile intermediate for synthesizing biologically active compounds, including ynenol lactones and cytotoxic macrolides. Its hypoglycemic activity has been demonstrated in animal models, but it has not been developed as a therapeutic agent. It is also used as a building block for sequence-defined oligomers and as a click chemistry reagent. The compound is for research use only and is not intended for human therapeutic or diagnostic use.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C5H6O2
Molecular Weight
98.10
Exact Mass
98.036
CAS #
6089-09-4
PubChem CID
22464
Appearance
White to light yellow <54°C solid powder,>57°C liquid
Density
1.1±0.1 g/cm3
Boiling Point
199.2±0.0 °C at 760 mmHg
Melting Point
54-57 °C(lit.)
Flash Point
90.8±17.3 °C
Vapour Pressure
0.1±0.8 mmHg at 25°C
Index of Refraction
1.462
LogP
0.43
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
2
Rotatable Bond Count
2
Heavy Atom Count
7
Complexity
107
Defined Atom Stereocenter Count
0
SMILES
O([H])C(C([H])([H])C([H])([H])C#C[H])=O
InChi Key
MLBYLEUJXUBIJJ-UHFFFAOYSA-N
InChi Code
InChI=1S/C5H6O2/c1-2-3-4-5(6)7/h1H,3-4H2,(H,6,7)
Chemical Name
pent-4-ynoic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 100 mg/mL (1019.37 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 1.25 mg/mL (12.74 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 12.5 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 1.25 mg/mL (12.74 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 12.5 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 1.25 mg/mL (12.74 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 12.5 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 10.1937 mL 50.9684 mL 101.9368 mL
5 mM 2.0387 mL 10.1937 mL 20.3874 mL
10 mM 1.0194 mL 5.0968 mL 10.1937 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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