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Pendimethalin

Cat No.:V64357 Purity: ≥98%
Pendimethalin is a herbicide that controls annual grasses and certain broadleaf weeds.
Pendimethalin
Pendimethalin Chemical Structure CAS No.: 40487-42-1
Product category: Others 12
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
500mg
Other Sizes

Other Forms of Pendimethalin:

  • Pendimethalin-d5 (pendimethalin-d6; pendimethalin-d6)
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
Pendimethalin is a herbicide that controls annual grasses and certain broadleaf weeds. Pendimethalin inhibits cell division and cell elongation.
Biological Activity I Assay Protocols (From Reference)
ADME/Pharmacokinetics
Absorption, Distribution and Excretion
Within 24 hours, pentyrenone was primarily excreted in feces as the parent compound, with 20% excreted in urine (using a rat model). In rats administered 37 mg/kg of radiolabeled pentyrenone, 90.3% of the dose was recovered in feces and urine 24 hours later. After 96 hours, 95.8% of the dose was recovered in urine (20.9%) and feces (74.9%). With lower doses (7.3 mg/kg), 99.8% of the dose was recovered in urine (21.8%) and feces (78.0%) after 12 hours. After 96 hours, residual amounts in all tissues except adipose tissue were below 0.3 ppm, with 0.9 ppm remaining in adipose tissue. This study indicates that most ingested pentyrenone is not absorbed into the bloodstream but is excreted in feces. Pendimethalin, absorbed into the bloodstream via the gastrointestinal tract, is rapidly metabolized in the kidneys and liver, and then excreted in the urine.
Metabolism/Metabolites
This study, using a rat model, focused on the metabolites of the dinitroaniline herbicide pendimethalin in tissues and urine. Royal Hart Wistar rats were given a single oral dose of radiolabeled methyl- or ethyl-labeled pendimethalin. At doses of 7.3 and 37 mg/kg, the radioactive material was rapidly excreted in urine and feces. After 96 hours, residual amounts in all tissues except adipose tissue were below 0.3 ppm, with a residual amount of 0.9 ppm in adipose tissue. Based on the identification of 12 metabolites in urine and tissues, the main metabolic pathways of pendimethalin include hydroxylation of 4-methyl and N-1-ethyl groups, oxidation of these alkyl groups to carboxylic acids, nitro reduction, cyclization, and conjugation. The cyclization reaction produces methylbenzimidazole carboxylic acid, a metabolite specific to the liver and kidneys. All major metabolites retained the radiolabeling of pentylbenzyl alcohol, indicating that N-dealkylation of the isopentyl group was not significant. This study expands our understanding of the metabolic pathways of dinitroaniline drugs in rats and confirms that pentylbenzyl alcohol is primarily metabolized through multiple pathways. After absorption into the bloodstream from the gastrointestinal tract, pentylbenzyl alcohol is rapidly metabolized in the kidneys and liver, and then excreted in the urine. Based on 12 metabolites identified in urine and tissues, the main metabolic pathways of pentylbenzyl alcohol include hydroxylation of 4-methyl and N-1-ethyl groups, oxidation of these alkyl groups to carboxylic acids, nitro reduction, cyclization, and conjugation reactions. The cyclization reaction produces methylbenzimidazole carboxylic acid, a liver- and kidney-specific metabolite (A624, L1133).
References

[1]. Effect of adjuvant on pendimethalin and dimethenamid-P behaviour in soil. J Hazard Mater. 2018 Jul 15;354:266-274.

Additional Infomation
Pendimethalin is an orange-yellow crystalline powder, non-corrosive, and used as a herbicide. Pendimethalin belongs to the substituted aniline class of compounds, with the structure N-(pentane-3-yl)aniline, containing two nitro substituents at positions 2 and 6, and two methyl substituents at positions 3 and 4. It is a herbicide used to control most annual grasses and many annual broadleaf weeds. It is both a herbicide and an environmental pollutant and an agrochemical. It is a substituted aniline, secondary amine, and C-nitro compound. Pendimethalin is a pre-emergence herbicide used to prevent the germination of crabgrass. Pendimethalin was included in the biocidal ban proposed by the Swedish Chemicals Agency, which was approved by the European Parliament on January 13, 2009 (L800).
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C13H19N3O4
Molecular Weight
281.31
Exact Mass
281.137
CAS #
40487-42-1
Related CAS #
Pendimethalin-d5;1219803-39-0
PubChem CID
38479
Appearance
Orange to red solid powder
Density
1.2±0.1 g/cm3
Boiling Point
421.0±45.0 °C at 760 mmHg
Melting Point
56-57°C
Flash Point
208.4±28.7 °C
Vapour Pressure
0.0±1.0 mmHg at 25°C
Index of Refraction
1.580
LogP
5.56
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
4
Heavy Atom Count
20
Complexity
349
Defined Atom Stereocenter Count
0
InChi Key
CHIFOSRWCNZCFN-UHFFFAOYSA-N
InChi Code
InChI=1S/C13H19N3O4/c1-5-10(6-2)14-12-11(15(17)18)7-8(3)9(4)13(12)16(19)20/h7,10,14H,5-6H2,1-4H3
Chemical Name
3,4-dimethyl-2,6-dinitro-N-pentan-3-ylaniline
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 50 mg/mL (177.74 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (8.89 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: 2.5 mg/mL (8.89 mM) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), suspension solution; with ultrasonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.5548 mL 17.7740 mL 35.5480 mL
5 mM 0.7110 mL 3.5548 mL 7.1096 mL
10 mM 0.3555 mL 1.7774 mL 3.5548 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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