yingweiwo

PhiKan 083

Cat No.:V28964 Purity: ≥98%
PhiKan 083 is a carbazole analogue that stabilizes p53 mutant Y220C with Kd of 167 μM.
PhiKan 083
PhiKan 083 Chemical Structure CAS No.: 880813-36-5
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
50mg
100mg
250mg
Other Sizes

Other Forms of PhiKan 083:

  • PhiKan-083
Official Supplier of:
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Top Publications Citing lnvivochem Products
Product Description
PhiKan 083 is a carbazole analogue that stabilizes p53 mutant Y220C with Kd of 167 μM. PhiKan 083 could be used in cancer-related research.
PhiKan 083 (CAS: 880813-36-5) is a carbazole derivative identified as a small molecule that can stabilize the mutant form of the tumor suppressor protein p53, specifically the Y220C mutant. With the molecular formula C16H18N2 and a molecular weight of 238.33 g/mol, it is a research tool used in cancer biology to study the p53 pathway. By binding to a surface cavity of the mutant protein, it aims to restore its tumor-suppressing function.
Biological Activity I Assay Protocols (From Reference)
Targets
PhiKan 083 targets the p53 mutant Y220C. It binds to the surface cavity of this mutant, stabilizing the protein and increasing its functional half-life. The binding affinity is characterized by a Kd value of 167 µM. This stabilization is a strategy to reactivate p53's tumor-suppressive functions in cancers harboring this specific mutation.
ln Vitro
PhiKan 083, a derivative of carbazole, has a Kd of 167 μM[1] and a relative binding affinity (Kd) of 150 μM for p53Y220C in Ln229 cells[3]. It binds to surface cavities and stabilizes Y220C (p53 mutant). Its thermal denaturation rate is slowed down by PhiKan 083 [2]. Engineered Ln229 cell variations' cell viability is decreased by PhiKan 083 (125 μM, 48 hours) [3]. In Ln229 cells, combining PhiKan 083 (100 μM) with NSC 123127 (1 μM) increases the pro-apoptotic activity of all variants (p53wt, p53Y220C, p53G245S, and p53R282W) [3].
In vitro, PhiKan 083 has been shown to reduce cell viability and enhance pro-apoptotic activity in Ln229 cell lines engineered to express various p53 mutants, including p53wt, p53Y220C, p53G245S, and p53R282W. It demonstrates a relative affinity (Kd) of 150 µM in Ln229 cells. When combined with NSC 123127 (1 µM), it potentiates pro-apoptotic effects.
ln Vivo
In vivo studies for PhiKan 083 are limited to preclinical cancer models. As a research compound, it has not advanced to clinical trials. However, its mechanism of stabilizing mutant p53 suggests that in animal models of cancer, it could potentially suppress tumor growth and enhance the efficacy of other chemotherapeutic agents. Comprehensive in vivo efficacy data for this specific compound are not available.
Enzyme Assay
The in vitro binding assay for PhiKan 083 involves techniques like surface plasmon resonance (SPR) or isothermal titration calorimetry (ITC) to measure its interaction with the p53 Y220C mutant protein. The purified protein is immobilized, and varying concentrations of the compound are flowed over the surface to determine the binding affinity (Kd) and kinetics.
Cell Assay
Cell Viability Assay [1]
Cell Types: Ln229, Ln229-p53-wt, Ln229-p53-Y220C, Ln229-p53-G245S, Ln229-p53-R282W Cell
Tested Concentrations: 125 μM
Incubation Duration: 48 hrs (hours)
Experimental Results: Caused ∼70 ± The Ln229 cell variant had a 5% reduction in cell viability.
In vitro cell culture studies are the primary method for evaluating PhiKan 083's activity. Ln229 glioblastoma cells, engineered to express different p53 mutants, are treated with the compound. Cell viability is assessed using standard assays like MTT or CellTiter-Glo. Apoptosis is measured by flow cytometry using Annexin V/propidium iodide staining. The expression of p53 target genes is analyzed by Western blotting or qPCR.
Animal Protocol
In vivo animal experiments are not standard for this early-stage research compound. However, potential in vivo models would involve xenograft studies in immunodeficient mice, where human cancer cells harboring the p53 Y220C mutation are implanted. PhiKan 083 would be administered via intraperitoneal injection, and tumor growth would be monitored to assess its in vivo efficacy as a single agent or in combination with chemotherapy.
ADME/Pharmacokinetics
PhiKan 083 has a molecular weight of 238.33 g/mol and is a solid compound with a purity of ≥95%. It is soluble in DMSO and ethanol. For in vivo studies, a formulation containing 10% DMSO, 40% PEG300, 5% Tween 80, and 45% saline is recommended. It is typically stored as a powder at -20°C, with stock solutions stable for up to one year at -80°C.
Toxicity/Toxicokinetics
Toxicological data for PhiKan 083 are limited to in vitro cytotoxicity assessments. As a research compound targeting p53, it is not intended for human use, and its safety profile is not well characterized. Standard precautions for handling chemical research reagents should be followed, including the use of personal protective equipment.
References

[1]. Targeted rescue of a destabilized mutant of p53 by an in silico screened drug. Proc Natl Acad Sci U S A. 2008 Jul 29;105(30):10360-5.

[2]. Effect of Y220C mutation on p53 and its rescue mechanism: a computer chemistry approach. Protein J. 2013 Jan;32(1):68-74.

[3]. A protein folding molecular imaging biosensor monitors the effects of drugs that restore mutant p53 structure and its downstream function in glioblastoma cells. Oncotarget. 2018 Apr 20;9(30):21495-21511.

Additional Infomation
PhiKan 083 is a research compound used for studying the p53 pathway. It serves as a valuable tool for exploring therapeutic strategies related to p53 mutations. By stabilizing the p53 mutant Y220C, it contributes to a better understanding of mutant p53 function and the development of targeted therapies for cancers associated with this specific mutation.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C16H18N2.HCL
Molecular Weight
274.78846
Exact Mass
238.146
CAS #
880813-36-5
Related CAS #
PhiKan 083 hydrochloride;1050480-30-2
PubChem CID
4722579
Appearance
Colorless to light yellow solid powder
LogP
4.726
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
1
Rotatable Bond Count
3
Heavy Atom Count
18
Complexity
278
Defined Atom Stereocenter Count
0
InChi Key
LBPNOEAFWYTTEB-UHFFFAOYSA-N
InChi Code
InChI=1S/C16H18N2/c1-3-18-15-7-5-4-6-13(15)14-10-12(11-17-2)8-9-16(14)18/h4-10,17H,3,11H2,1-2H3
Chemical Name
1-(9-ethylcarbazol-3-yl)-N-methylmethanamine
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~419.59 mM)
Ethanol : ~100 mg/mL (~419.59 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (10.49 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.

Solubility in Formulation 2: ≥ 2.17 mg/mL (9.11 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 21.7 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

View More

Solubility in Formulation 3: 2.17 mg/mL (9.11 mM) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), suspension solution; with ultrasonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 21.7 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.6391 mL 18.1957 mL 36.3914 mL
5 mM 0.7278 mL 3.6391 mL 7.2783 mL
10 mM 0.3639 mL 1.8196 mL 3.6391 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
/

Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
+
+
+

Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Contact Us