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Pemigatinib (INCB054828)

Alias: INCB054828; INCB54828; INCB-054828; INCB 054828; INCB 54828; INCB-54828
Cat No.:V34674 Purity: ≥98%
Pemigatinib (formerly INCB054828; INCB-054828; Pemazyre) is a novel, potent, orally bioavailable and selective FGFR inhibitor with IC50 of 0.4 nM, 0.5 nM, 1.2 nM, 30 nM for FGFR1, FGFR2, FGFR3, FGFR4, respectively.
Pemigatinib (INCB054828)
Pemigatinib (INCB054828) Chemical Structure CAS No.: 1513857-77-6
Product category: FGFR
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
25mg
50mg
100mg
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Product Description

Pemigatinib (formerly INCB054828; INCB-054828; Pemazyre) is a novel, potent, orally bioavailable and selective FGFR inhibitor with IC50 of 0.4 nM, 0.5 nM, 1.2 nM, 30 nM for FGFR1, FGFR2, FGFR3, FGFR4, respectively. For the treatment of bile duct cancer (cholangiocarcinoma), pemigatinib has been approved as a medicine. Inhibiting FGFR1/2/3 through binding to it, INCB054828 may lead to the suppression of signal transduction pathways associated with FGFR1/2/3. When FGFR1/2/3 is overexpressed in tumor cells, this prevents their proliferation.

Biological Activity I Assay Protocols (From Reference)
Targets
FGFR1 (IC50 = 0.4 nM); FGFR2 (IC50 = 0.5 nM); FGFR3 (IC50 = 1.2 nM); FGFR4 (IC50 = 30 nM)
ln Vitro
Pemigatinib effectively reduces reactive astrocytes' ability to attract myeloid cells. Pemigatinib's potential to modulate FGFR may hold promise for promoting protective mechanisms in both human and murine systems and suppressing proinflammatory astrocyte responses.[2]
ln Vivo
Pemigatinib does not appear to have any effect on the acute EAE disease course.[2]
Cell Assay
Afatinib (10 μM), UNC2025 (10 μM), or pemigatinib (10 μM) were used for a 24-hour period to stimulate primary mouse astrocytes. ACM or a control medium was used to stimulate N2A neuronal cells for a full day. After being detached, primary mouse astrocytes and N2A neuronal cells were once again washed in cold 1× PBS. It was done using live/dead staining. Furthermore, annexin V–propidium iodide staining was carried out. Prior to being acquired on a 3L Cytek Northern Lights flow cytometer, cells were first rinsed and then resuspended in annexin V binding buffer. The OMIQ platform was used to analyze the flow cytometry data.
Animal Protocol
Female C57Bl/6J mice of experimental autoimmune encephalomyelitis (EAE) model
2.5 mg/kg
i.n.
ADME/Pharmacokinetics
Absorption, Distribution and Excretion
Following a single oral dose of 13.5 mg pemigatinib, the median time to peak concentration (Tmax) was 1.13 hours (0.50–6.00). With repeated once-daily dosing, steady-state concentrations were reached within 4 days, with a median drug accumulation ratio of 1.63 (range 0.63–3.28). Steady-state concentrations of pemigatinib increased dose-proportionately over a dose range of 1–20 mg (approximately 0.07–1.5 times the recommended dose). The mean steady-state AUC and Cmax were 2620 nM·h (coefficient of variation 54%) and 236 nM, respectively. Following a single oral dose of 11 mg of radiolabeled pemigatinib, approximately 82.4% of the dose was recovered in feces. Of the recovered drug, approximately 1.4% was unmetabolized parent compound. Approximately 12.6% of the dose was recovered in the urine, of which 1% was unmetabolized parent compound. Following a single oral dose of 13.5 mg pemigatinib, the apparent volume of distribution was 235 L (coefficient of variation 60.8%). Following a single oral dose of 13.5 mg pemigatinib, the geometric mean apparent clearance (CL/F) was 10.6 L/h (coefficient of variation 54%). Metabolites/Metabolites: In vitro studies have shown that pemigatinib is primarily metabolized by the CYP3A4 enzyme. Its specific metabolic pathway and metabolites have not been characterized. Biological Half-Life: Following a single oral dose of 13.5 mg pemigatinib, the geometric mean elimination half-life (t½) of pemigatinib was 15.4 (51.6% CV) hours.
Toxicity/Toxicokinetics
Hepatotoxicity
In pre-registration clinical trials of pemigatinib, elevated ALT levels occurred in 43% to 50% of patients, with 4% to 12% experiencing ALT levels exceeding five times the upper limit of normal. Elevated serum bilirubin was also common, but typically occurred in patients with cholangiocarcinoma and partial or complete biliary obstruction. No clinically significant liver injury (with jaundice) or death due to liver failure caused by pemigatinib treatment was reported. These elevations were generally self-limiting and rapidly returned to normal regardless of dose adjustment. No clinically significant liver injury cases have been reported since pemigatinib's approval. However, overall clinical experience with this drug is limited, and the high incidence of elevated serum transaminases during treatment suggests the possibility of clinically significant liver injury. Probability Score: E (Unproven, but likely a rare cause of clinically significant liver injury).
Effects during pregnancy and lactation
◉ Overview of use during lactation
There is currently no information regarding the clinical use of pemigatinib during lactation. The manufacturer recommends discontinuing breastfeeding during treatment with pemigatinib and for one week after the last dose.
◉ Effects on breastfed infants
As of the revision date, no relevant published information was found.
◉ Effects on lactation and breast milk
As of the revision date, no relevant published information was found.
Protein binding
The in vitro serum protein binding rate of pemigatinib is 90.6%, with a drug concentration range of 1 to 10 µM.
References

[1]. Pharmacol Res . 2020 Jan:151:104567.

[2]. JCI Insight . 2022 Apr 8;7(7):e154824.

Additional Infomation
Pharmacodynamics
Pemitinib is a small molecule kinase inhibitor that exerts its antitumor activity by inhibiting fibroblast growth factor receptor (FGFR). Pemitinib has an IC50 of less than 2 nM and exhibits potent inhibitory activity against FGFR1, FGFR2, and FGFR3. In mouse xenograft models of human tumors with altered FGFR1, FGFR2, or FGFR3, pemitinib demonstrates potent antitumor activity by inhibiting the growth of xenograft tumors. Furthermore, it has shown efficacy in patient-derived cholangiocarcinoma xenograft models expressing the oncogenic FGFR2 Transformer-2β homolog (TRA2b) fusion protein. Pemitinib also inhibits FGFR4 in vitro, but at concentrations approximately 100-fold higher than those inhibiting FGFR1, 2, and 3.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C24H27F2N5O4
Molecular Weight
487.4991
Exact Mass
487.203
Elemental Analysis
C, 59.13; H, 5.58; F, 7.79; N, 14.37; O, 13.13
CAS #
1513857-77-6
Related CAS #
1513857-77-6;1513857-77-6 (HCl);
PubChem CID
86705695
Appearance
White to light yellow solid powder
Density
1.4±0.1 g/cm3
Index of Refraction
1.620
LogP
0.66
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
8
Rotatable Bond Count
6
Heavy Atom Count
35
Complexity
731
Defined Atom Stereocenter Count
0
SMILES
FC1C(=C([H])C(=C(C=1N1C(N(C([H])([H])C([H])([H])[H])C2C(=C([H])N=C3C=2C([H])=C(C([H])([H])N2C([H])([H])C([H])([H])OC([H])([H])C2([H])[H])N3[H])C1([H])[H])=O)F)OC([H])([H])[H])OC([H])([H])[H]
InChi Key
HCDMJFOHIXMBOV-UHFFFAOYSA-N
InChi Code
InChI=1S/C24H27F2N5O4/c1-4-30-21-14(11-27-23-16(21)9-15(28-23)13-29-5-7-35-8-6-29)12-31(24(30)32)22-19(25)17(33-2)10-18(34-3)20(22)26/h9-11H,4-8,12-13H2,1-3H3,(H,27,28)
Chemical Name
11-(2,6-difluoro-3,5-dimethoxyphenyl)-13-ethyl-4-(morpholin-4-ylmethyl)-5,7,11,13-tetrazatricyclo[7.4.0.02,6]trideca-1,3,6,8-tetraen-12-one
Synonyms
INCB054828; INCB54828; INCB-054828; INCB 054828; INCB 54828; INCB-54828
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 25~40 mg/mL (51.3~82.1 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.75 mg/mL (5.64 mM) (saturation unknown) in 5% DMSO + 95% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

Solubility in Formulation 2: 2.08 mg/mL (4.27 mM) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), suspension solution; with ultrasonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.08 mg/mL (4.27 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.


Solubility in Formulation 4: (saturation unknown) in (add these co-solvents sequentially from left to right, and one by one),

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.0513 mL 10.2564 mL 20.5128 mL
5 mM 0.4103 mL 2.0513 mL 4.1026 mL
10 mM 0.2051 mL 1.0256 mL 2.0513 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
Pemigatinib + Afatinib in Advanced Refractory Solid Tumors
CTID: NCT06302621
Phase: Phase 1    Status: Recruiting
Date: 2024-11-18
A Study to Evaluate the Efficacy and Safety of Pemigatinib (INCB054828) in Subjects With Myeloid/Lymphoid Neoplasms With FGFR1 Rearrangement - (FIGHT-203)
CTID: NCT03011372
Phase: Phase 2    Status: Completed
Date: 2024-11-18
Efficacy of Pemigatinib in Patients With Solid Tumors Characterized by an Alteration of the Gene FGFR in Tumor Cells
CTID: NCT06653777
Phase: Phase 2    Status: Not yet recruiting
Date: 2024-10-24
Pemigatinib in Patients With Relapsed or Refractory B-cell Non-Hodgkin Lymphomas
CTID: NCT06300528
Phase: Phase 2    Status: Not yet recruiting
Date: 2024-10-15
A Phase 2, Open Label Study of PEmigatinib and REtifanlimab in Advanced Dedifferentiated LIposarcoma (PERELI)
CTID: NCT06389799
Phase: Phase 2    Status: Recruiting
Date: 2024-10-08
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The Purpose of the Study is to Continue to Provide Pemigatinib to Patients With Advanced Malignancies.
CTID: NCT04949191
Phase: Phase 2    Status: Terminated
Date: 2024-09-19


Phase II Trial of Pemigatinib in Combination With Atezolizumab and Bevacizumab for Treatment of Advanced Cholangiocarcinoma With FGFR2 Fusion
CTID: NCT06439485
Phase: Phase 2    Status: Not yet recruiting
Date: 2024-09-19
Safety and Efficacy of Retifanlimab (INCMGA00012) Alone or in Combination With Other Therapies in Participants With Advanced or Metastatic Endometrial Cancer Who Have Progressed on or After Platinum-based Chemotherapy.
CTID: NCT04463771
Phase: Phase 2    Status: Active, not recruiting
Date: 2024-09-19
Pemigatinib After Chemotherapy for the Treatment of Newly Diagnosed Acute Myeloid Leukemia
CTID: NCT04659616
Phase: Phase 1    Status: Recruiting
Date: 2024-08-15
Pemigatinib and Immune Checkpoint Inhibitor Treated FGFR1/2/3 Alteration Advanced Solid Tumor
CTID: NCT06551896
Phase: Phase 2    Status: Not yet recruiting
Date: 2024-08-13
Study to Evaluate the Efficacy and Safety of Pemigatinib in Participants With Relapsed or Refractory Advanced Non-Small Cell Lung Cancer With an FGFR Alteration
CTID: NCT05253807
Phase: Phase 2    Status: Completed
Date: 2024-08-06
A Study to Evaluate the Efficacy and Safety of Pemigatinib Versus Chemotherapy in Unresectable or Metastatic Cholangiocarcinoma
CTID: NCT03656536
Phase: Phase 3    Status: Active, not recruiting
Date: 2024-07-26
The Finnish National Study to Facilitate Patient Access to Targeted Anti-cancer Drugs
CTID: NCT05159245
Phase: Phase 2    Status: Recruiting
Date: 2024-07-15
Study to Evaluate the Efficacy and Safety of Pemigatinib in Participants With Previously Treated Glioblastoma or Other Primary Central Nervous System Tumors Harboring Activating FGFR1-3 Alterations
CTID: NCT05267106
Phase: Phase 2    Status: Active, not recruiting
Date: 2024-06-27
A Study of Pemigatinib in Non-muscle Invasive Bladder Cancer Patients With Recurrent Low- or Intermediate-Risk Tumors
CTID: NCT03914794
Phase: Phase 2    Status: Recruiting
Date: 2024-06-18
A Phase II Randomized Study Comparing the Efficacy and Safety of Targeted Therapy or Cancer Immunotherapy Versus Platinum-Based Chemotherapy in Patients With Cancer of Un
Open-label, single-arm, Phase II study, evaluating safety and efficacy of INCB054828 (Pemigatinib) as adjuvant therapy for molecularly-selected, high-risk patients with urothelial carcinoma who have received radical surgery. A European Association of Urology Research Foundation Phase II Clinical Trial
CTID: null
Phase: Phase 2    Status: Prematurely Ended
Date: 2020-12-04
The ROME trial from histology to target: the road to personalize target therapy and immunotherapy
CTID: null
Phase: Phase 2    Status: Ongoing
Date: 2020-07-08
ProTarget
CTID: null
Phase: Phase 2    Status: Trial now transitioned
Date: 2020-04-28
A Phase 2, Open-Label, Randomized, Multicenter Study to Evaluate the Efficacy and Safety of Pemigatinib Plus Pembrolizumab Versus Pemigatinib Alone Versus Standard of Care as First-Line Treatment for Metastatic or Unresectable Urothelial Carcinoma in Cisplatin-Ineligible Participants Whose Tumors Express FGFR3 Mutation or Rearrangement (FIGHT-205)
CTID: null
Phase: Phase 2    Status: GB - no longer in EU/EEA, Prematurely Ended, Completed
Date: 2019-12-16
A Phase 2, Open-Label, Single-Arm, Multicenter Study to Evaluate the Efficacy and Safety of Pemigatinib in Participants With Previously Treated Locally Advanced/Metastatic or Surgically Unresectable Solid Tumor Malignancies Harboring Activating FGFR Mutations or Translocations (FIGHT-207)
CTID: null
Phase: Phase 2    Status: GB - no longer in EU/EEA, Prematurely Ended, Completed
Date: 2019-10-16
A Phase 3, Open-Label, Randomized, Active-Controlled, Multicenter Study to Evaluate the Efficacy and Safety of Pemigatinib Versus Gemcitabine Plus Cisplatin Chemotherapy in First-Line Treatment of Participants With Unresectable or Metastatic Cholangiocarcinoma With FGFR2 Rearrangement (FIGHT-302)
CTID: null
Phase: Phase 3    Status: Ongoing, Trial now transitioned, GB - no longer in EU/EEA, Completed
Date: 2019-05-30
A phase II trial of the FGFR inhibitor INCB054828 in patients with advanced esophageal-gastric junction (EGJ)/Gastric cancer Trastuzumab Resistant: the FiGhTeR trial
CTID: null
Phase: Phase 2    Status: Prematurely Ended
Date: 2019-05-08
A Phase 2, Open-Label, Single-Arm, Multicenter Study to Evaluate the Efficacy and Safety of INCB054828 in Subjects With Advanced/Metastatic or Surgically Unresectable Cholangiocarcinoma Including FGFR2 Translocations Who Failed Previous Therapy
CTID: null
Phase: Phase 2    Status: GB - no longer in EU/EEA, Completed
Date: 2017-05-04
A Phase 1/2, Open-Label, Dose-Escalation, Safety and Tolerability Study of INCB054828 in Subjects With Advanced Malignancies (FIGHT-101)
CTID: null
Phase: Phase 1, Phase 2    Status: Completed
Date: 2017-03-29
A Phase 2, Open-Label, Monotherapy, Multicenter Study to Evaluate the Efficacy and Safety of INCB054828 in Subjects With Myeloid/Lymphoid Neoplasms With FGFR1 Rearrangement
CTID: null
Phase: Phase 2    Status: Ongoing, GB - no longer in EU/EEA, Completed
Date: 2017-01-30
A Phase 2, Open-Label, Single-Agent, Multicenter Study to Evaluate the Efficacy and Safety of INCB054828 in Subjects With Metastatic or Surgically Unresectable Urothelial Carcinoma Harboring FGF/FGFR Alterations (FIGHT-201)
CTID: null
Phase: Phase 2    Status: GB - no longer in EU/EEA, Completed
Date: 2017-01-12

Biological Data
  • Therapeutic potential of i.n. afatinib and pemigatinib application in acute EAE. JCI Insight . 2022 Apr 8;7(7):e154824.
  • Schematic mechanism of action of afatinib, UNC2025, and pemigatinib. JCI Insight . 2022 Apr 8;7(7):e154824.
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