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Ninhydrin

Cat No.:V37992 Purity: ≥98%
Ninhydrin can be used as a chromogenic analytical probe for quantitative analysis of amino acid (AA)s and proteins.
Ninhydrin
Ninhydrin Chemical Structure CAS No.: 485-47-2
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
Size Price
500mg
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Product Description
Ninhydrin can be used as a chromogenic analytical probe for quantitative analysis of amino acid (AA)s and proteins.
Ninhydrin (CAS 485-47-2), also known as 2,2-dihydroxy-1,3-indandione, is a well-known chemical reagent widely used for the qualitative and quantitative detection of amino acids, peptides, and amines. With the molecular formula C₉H₆O₄ and a molecular weight of 178.14 g/mol, this compound reacts with primary amines to produce a deep blue or purple color known as Ruhemann's purple. Ninhydrin is a critical tool in protein analysis, chromatography, and forensic science, especially for developing latent fingerprints on porous surfaces such as paper. It is also used in spectrophotometric grade for various analytical applications.
Biological Activity I Assay Protocols (From Reference)
Targets
Ninhydrin does not have a specific biological target, as it is primarily used as a chemical reagent for the detection of primary amines. It reacts with the α-amino group of amino acids and peptides to form a colored imino derivative, which can be quantified spectrophotometrically. The reaction involves the oxidative deamination of the amino acid, leading to the formation of an aldehyde and the reduced form of ninhydrin, which then reacts with another molecule of ninhydrin and ammonia to form the purple pigment. This reaction is highly specific for primary amines, making ninhydrin a valuable tool in analytical chemistry.
ln Vitro
Protein amino acid analysis uses ninhydrin. Proline is the only amino acid that cannot be hydrolyzed and react with ninhydrin. The amino acids are separated by chromatography and then measured using colorimetry. Indione dione diamine is the blue or purple reaction product that results from the interaction of ninhydrin with primary and secondary amines.
In vitro, Ninhydrin is widely used as a chromogenic analytical probe for the quantification of amino acids and proteins. The ninhydrin reaction is the basis for the standard amino acid analysis method, where amino acids are separated by chromatography and then detected by post-column derivatization with ninhydrin. The intensity of the purple color is proportional to the concentration of the amino acid, and the absorbance is measured at 570 nm. Ninhydrin is also used in protein quantification assays and in the detection of peptides in biological samples.
ln Vivo
In vivo, Ninhydrin is not used as a therapeutic agent; it is a chemical reagent used in analytical and forensic applications. However, the detection of amino acids and peptides in biological samples using ninhydrin has important implications for clinical diagnostics and biomedical research. For example, the measurement of amino acid levels in plasma and urine can be used to diagnose metabolic disorders. Ninhydrin is also used in forensic science to develop latent fingerprints on porous surfaces.
Enzyme Assay
In vitro enzyme/receptor binding assays are not applicable to Ninhydrin, as it is a chemical reagent rather than a pharmacologically active compound. However, its use in analytical chemistry involves the reaction with primary amines. The assay is performed by mixing the sample containing primary amines with ninhydrin in a buffer solution and heating the mixture to 100°C for a few minutes. The resulting purple color is measured spectrophotometrically at 570 nm. The intensity of the color is proportional to the concentration of the primary amine.
Cell Assay
In vitro cellular experiments are not applicable to Ninhydrin, as it is a chemical reagent rather than a biologically active compound. However, it can be used to detect amino acids in cell culture media or cell lysates. The sample is deproteinized, and the supernatant is reacted with ninhydrin. The absorbance is measured at 570 nm, and the concentration of amino acids is calculated using a standard curve. This method is simple and widely used for the determination of total amino acid content in biological samples.
Animal Protocol
In vivo animal studies are not applicable to Ninhydrin, as it is a chemical reagent rather than a therapeutic agent. However, it can be used to measure amino acid levels in plasma, urine, or tissue extracts from animals. The samples are deproteinized, and the supernatant is reacted with ninhydrin. The absorbance is measured at 570 nm. This method is used in metabolic studies to assess amino acid metabolism and nutritional status.
ADME/Pharmacokinetics
Pharmacokinetic properties are not applicable to Ninhydrin, as it is a chemical reagent rather than a therapeutic agent. The compound is not designed to be absorbed or distributed in the body. It is used as an analytical reagent in vitro. If handled improperly, it can be absorbed through the skin or inhaled, but its pharmacokinetics in the body have not been characterized.
Toxicity/Toxicokinetics
The toxicity of Ninhydrin has been evaluated for safe handling in the laboratory. The compound is considered to have low acute toxicity, but it can be irritating to the skin, eyes, and respiratory tract. Prolonged exposure to light should be avoided, as it can cause decomposition. The compound yields highly fluorescent ternary compounds with aldehydes and primary amines. Standard safety precautions, including the use of gloves and eye protection, should be followed when handling this compound.
References

[1]. Utility of ninhydrin reagent for spectrofluorimetric determination of heptaminol in human plasma.Luminescence. 2018 Sep;33(6):1107-1112.

[2]. Ninhydrin-sodium molybdate chromogenic analytical probe for the assay of amino acids and proteins.rSpectrochim Acta A Mol Biomol Spectrosc. 2017 Feb 15;173:897-903.

Additional Infomation
Ninhydrin is a white to pale yellow crystal or powder. It becomes anhydrous and turns red at 257-266 °F (121-130 °C). (NTP, 1992) Ninhydrin belongs to the indanone class of compounds and is a compound of indan-1,3-dione with two hydroxyl substituents at the 2-position. It is a colorimetric indicator and a human metabolite. It belongs to the indanone class, β-diketones, aromatic ketones, and ketone hydrates. 2,2-Dihydroxy-1H-indan-1,3-(2H)-dione. It is toxic to the skin and mucous membranes. It is used in the chemical analysis of peptide bonds, such as protein determination, and has radiosensitizing effects.
Ninhydrin is a well-known chemical reagent widely used for the detection of amino acids, peptides, and amines. It reacts with primary amines to produce a deep blue or purple color, known as Ruhemann's purple. Ninhydrin is a critical tool in protein analysis, chromatography, and forensic science, especially for developing latent fingerprints on porous surfaces such as paper. It is also used in spectrophotometric grade for various analytical applications. The compound's specificity for primary amines and its ease of use make it an indispensable reagent in analytical chemistry.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C9H6O4
Molecular Weight
178.14
Exact Mass
178.026
CAS #
485-47-2
PubChem CID
10236
Appearance
Off-white to light yellow solid powder
Density
1.7±0.1 g/cm3
Boiling Point
449.3±45.0 °C at 760 mmHg
Melting Point
250 °C (dec.)(lit.)
Flash Point
239.7±25.2 °C
Vapour Pressure
0.0±1.2 mmHg at 25°C
Index of Refraction
1.737
LogP
1.07
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
0
Heavy Atom Count
13
Complexity
243
Defined Atom Stereocenter Count
0
InChi Key
FEMOMIGRRWSMCU-UHFFFAOYSA-N
InChi Code
InChI=1S/C9H6O4/c10-7-5-3-1-2-4-6(5)8(11)9(7,12)13/h1-4,12-13H
Chemical Name
2,2-dihydroxyindene-1,3-dione
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~50 mg/mL (~280.68 mM)
H2O : ~25 mg/mL (~140.34 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (14.03 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (14.03 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: 25 mg/mL (140.34 mM) in PBS (add these co-solvents sequentially from left to right, and one by one), clear solution; with ultrasonication (<60°C).


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 5.6136 mL 28.0678 mL 56.1356 mL
5 mM 1.1227 mL 5.6136 mL 11.2271 mL
10 mM 0.5614 mL 2.8068 mL 5.6136 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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