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MS4077

Alias: MS-4078; MS4078; MS 4078
Cat No.:V3572 Purity: ≥98%
MS4077 is a potent PROTACdegrader of anaplastic lymphoma kinase (ALK)with aKdof 37 nM for binding affinity to ALK.
MS4077
MS4077 Chemical Structure CAS No.: 2230077-10-6
Product category: Others 8
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
Other Sizes
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description
MS4077 is a potent PROTAC degrader of anaplastic lymphoma kinase (ALK) with a Kd of 37 nM for binding affinity to ALK. MS4077 and MS4078 potently decreased cellular levels of oncogenic active ALK fusion proteins in a concentration- and time-dependent manner in SU-DHL-1 lymphoma and NCI-H2228 lung cancer cells. The ALK protein degradation induced by compounds 5 and 6 was cereblon and proteasome dependent. In addition, MS4077 and MS4078 potently inhibited proliferation of SU-DHL-1 cells. Furthermore, compound 6 displayed good plasma exposure in a mouse pharmacokinetic study, thus is suitable for in vivo efficacy studies. This study paved the way for developing the next generation of ALK PROTACs.
MS4077 (CAS# 2230077-10-6) is a potent PROTAC degrader of anaplastic lymphoma kinase (ALK) based on a Cereblon ligand. It has a molecular formula of C55H72ClN9O13S and a molecular weight of 1134.73. MS4077 has a binding affinity (Kd) of 37 nM for ALK. It is used in research to study ALK-driven cancers and the effects of targeted protein degradation.
Biological Activity I Assay Protocols (From Reference)
Targets
MS4077 targets anaplastic lymphoma kinase (ALK) for degradation via the ubiquitin-proteasome pathway. It binds to ALK with a Kd of 37 nM. The compound recruits the Cereblon E3 ubiquitin ligase complex, leading to ubiquitination and subsequent proteasomal degradation of ALK. This results in the elimination of oncogenic ALK fusion proteins and inhibition of downstream signaling pathways.
ln Vitro
Suspension is effectively suspended by MS4077. The IC50 for SU-DHL-1 cell resuspension at a concentration of MS4077 (10-3-1 μM; 3 days) is 46 ± 4 nM. NCI-H2228 cells respond to MS4077 with a lower fat body mass (10-2-100.5 μM; 3 days) than SU-DHL-1 cells [1]. In SU-DHL-1 and NCI-H2228, MS4077 efficiently lowers the levels of ALK fusion protein and suppresses ALK autophosphorylation as well as downstream STAT3 phosphorylation-dependent way. After 16 hours of treatment, MS4077 decreased the levels of NPM-ALK protein in SU-DHL-1 cells, with a DC50 (50% phosphorylation) value of 3±1 nM. The phosphorylation of STAT3 Y705 and ALK Y1507 is inhibited at a rate greater than 90% at 100 nM. After 16 hours, MS4077 treatment decreased EML4-ALK protein levels in NCI-H2228 cells with a comparable DC50 of 34±9 nM. Assay for cell viability at a dose of 100 nM [1]
MS4077 potently decreases cellular levels of oncogenic active ALK fusion proteins in a concentration- and time-dependent manner in SU-DHL-1 lymphoma and NCI-H2228 lung cancer cells. The ALK protein degradation induced by MS4077 is cereblon and proteasome dependent. In addition, MS4077 potently inhibits proliferation of SU-DHL-1 cells.
ln Vivo
Specific in vivo activity data for MS4077 are not detailed in the available sources. However, a related compound (MS4078) displayed good plasma exposure in a mouse pharmacokinetic study, suggesting that MS4077 may also be suitable for in vivo efficacy studies. As a potent ALK degrader, MS4077 is expected to have in vivo anti-tumor activity in ALK-driven cancer models.
Enzyme Assay
The ALK binding assay for MS4077 involves measuring the compound's affinity for ALK using surface plasmon resonance (SPR) or a similar binding assay. The Kd value of 37 nM is determined from the binding curves. Degradation assays are performed by treating ALK-dependent cancer cell lines with MS4077 and measuring ALK protein levels by Western blot. The concentration- and time-dependent degradation is assessed to determine the potency of the compound.
Cell Assay
Cell Viability Assay[1]
Cell Types: SU-DHL-1 and NCI-H2228 Cell
Tested Concentrations: 10-3, 10-2.5, 10, NCI-H2228 cells diminished EML4-ALK protein by more than 90% level[1]. SU-DHL-1 cells were -2, 10-1.5, 10-1, 10-0.5 and 1 μM; NCI-H2228 cells were incubated at 10-2, 10-1.5, 10-1, 10-0.5, 1, 100.5 μM
Incubation Duration: 3 days
Experimental Results: Inhibits SU-DHL-1 cell proliferation (IC50=46 ± 4 nM). NCI-H2228 cells were less sensitive to proliferation than SU-DHL-1 cells.

Western Blot Analysis[1]
Cell Types: SU-DHL-1 and NCI-H2228 Cell
Tested Concentrations: 1, 3, 10, 30 and 100 μM for SU-DHL-1 cells; 3, 10, 30, 100 μM for NCI-H2228 cells 60 and 100 μM
Incubation Duration: 16 hrs (hours)
Experimental Results: NPM-ALK protein levels were diminished in SU-DHL-1 cells with DC50 as high as 3 ± 1 nM. diminished EML4-ALK protein levels in NCI-H2228 cells with a similar DC50 of 34 ± 9 nM.
To evaluate the cellular activity of MS4077, ALK-dependent cancer cell lines (such as SU-DHL-1 lymphoma and NCI-H2228 lung cancer cells) are seeded in culture plates and treated with varying concentrations of MS4077. ALK protein levels are assessed by Western blot analysis to confirm degradation. Cell proliferation is measured using MTT or CellTiter-Glo assays. The dependence on cereblon and the proteasome can be confirmed using specific inhibitors.
Animal Protocol
Specific in vivo animal experiment protocols for MS4077 are not detailed in the available sources. As a PROTAC degrader, the compound would typically be evaluated in xenograft models using ALK-driven human cancer cell lines. MS4077 would be administered intraperitoneally or intravenously, and tumor growth inhibition and ALK degradation in tumor tissue would be measured. The compound's pharmacokinetic properties would also be assessed.
ADME/Pharmacokinetics
Specific pharmacokinetic data for MS4077 are not provided in the available sources. However, a related compound (MS4078) displayed good plasma exposure in a mouse pharmacokinetic study, suggesting that MS4077 may have favorable PK properties. MS4077 has a molecular weight of 1134.73 and a molecular formula of C55H72ClN9O13S. It is typically stored as a powder at -20°C for up to 3 years.
Toxicity/Toxicokinetics
Specific toxicity data for MS4077 are not provided in the available sources. As a research compound, it is intended for laboratory use only and is not approved for human therapeutic applications. The compound is a potent ALK degrader, and its toxicity profile would be expected to reflect its mechanism of action. Standard safety precautions should be followed when handling this compound.
References

[1]. Proteolysis Targeting Chimeras (PROTACs) of Anaplastic Lymphoma Kinase (ALK). Eur J Med Chem. 2018 May 10;151:304-314.

Additional Infomation
MS4077 is an anaplastic lymphoma kinase (ALK) PROTAC degrader based on a Cereblon ligand, with a Kd of 37 nM for binding affinity to ALK. It potently decreases cellular levels of oncogenic active ALK fusion proteins in a concentration- and time-dependent manner in SU-DHL-1 lymphoma and NCI-H2228 lung cancer cells. The compound is supplied for research purposes.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C55H72CLN9O13S
Molecular Weight
1134.73
Exact Mass
1133.465
CAS #
2230077-10-6
PubChem CID
137628669
Appearance
Yellow to green solid powder
LogP
5.9
Hydrogen Bond Donor Count
5
Hydrogen Bond Acceptor Count
19
Rotatable Bond Count
31
Heavy Atom Count
79
Complexity
2050
Defined Atom Stereocenter Count
0
SMILES
N1(CC(NCCOCCOCCOCCOCCOCCNC2=CC=CC3=C2C(=O)N(C2CCC(=O)NC2=O)C3=O)=O)CCC(C2=CC(OC(C)C)=C(NC3=NC=C(Cl)C(NC4=CC=CC=C4S(C(C)C)(=O)=O)=N3)C=C2C)CC1
InChi Key
VEKJQNCZEPLNJF-UHFFFAOYSA-N
InChi Code
InChI=1S/C55H72ClN9O13S/c1-35(2)78-46-32-40(37(5)31-44(46)61-55-59-33-41(56)51(63-55)60-42-10-6-7-12-47(42)79(71,72)36(3)4)38-15-19-64(20-16-38)34-49(67)58-18-22-74-24-26-76-28-30-77-29-27-75-25-23-73-21-17-57-43-11-8-9-39-50(43)54(70)65(53(39)69)45-13-14-48(66)62-52(45)68/h6-12,31-33,35-36,38,45,57H,13-30,34H2,1-5H3,(H,58,67)(H,62,66,68)(H2,59,60,61,63)
Chemical Name
2-[4-[4-[[5-chloro-4-(2-propan-2-ylsulfonylanilino)pyrimidin-2-yl]amino]-2-methyl-5-propan-2-yloxyphenyl]piperidin-1-yl]-N-[2-[2-[2-[2-[2-[2-[[2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindol-4-yl]amino]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethyl]acetamide
Synonyms
MS-4078; MS4078; MS 4078
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture and light.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~110 mg/mL (~96.94 mM)
Solubility (In Vivo)
Solubility in Formulation 1: 6 mg/mL (5.29 mM) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), suspension solution; with sonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 60.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 6 mg/mL (5.29 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 60.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 0.8813 mL 4.4063 mL 8.8127 mL
5 mM 0.1763 mL 0.8813 mL 1.7625 mL
10 mM 0.0881 mL 0.4406 mL 0.8813 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
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In vivo Formulation Calculator (Clear solution)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Biological Data
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