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MI-538

Alias: MI538; MI 538; MI-538
Cat No.:V25510 Purity: ≥98%
MI-538 is an inhibitor (blocker/antagonist) of the interaction between menin and MLL fusion proteins; IC50 is 21 nM.
MI-538
MI-538 Chemical Structure CAS No.: 1857417-10-7
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
MI-538 is an inhibitor (blocker/antagonist) of the interaction between menin and MLL fusion proteins; IC50 is 21 nM.
Biological Activity I Assay Protocols (From Reference)
ln Vitro
At a GI50 of 83 nM, MI-538 suppresses the growth of MLL leukemia cells. MI-538 demonstrated strong selectivity for MLL fusion protein-transformed cells, as evidenced by its lack of effect (up to 6 μM) on the development of control cell lines HL-60 and HM-2 lacking MLL translocation. MI-538 exhibits a modest nanomolar affinity (Kd=6.5 nM) for menin. greater binding affinity to menin and potentially greater permeability of the cell membrane are the causes of its strong cellular activity. Hoxa9 and Meis1 gene expression were significantly downregulated after receiving MI-538 therapy. In MLL-AF9 cells, Hoxa9 expression may be reduced by roughly 50% at a concentration of 100 nM 27, and the impact on Meis1 expression is more pronounced [1].
ln Vivo
MI-538 therapy led to a notable 80% reduction in MV4;11 tumor volume with less than 10% weight loss. The results of MI-538 showed a considerable improvement in minimum clearance, Cmax (maximum compound concentration) in plasma, and exposure (area under the curve, AUC, value). MI-538 has a half-life of about 1.6 hours. Moreover, MI-538 has a high oral bioavailability of around 50% [1].
References

[1]. Property Focused Structure-Based Optimization of Small Molecule Inhibitors of the Protein-Protein Interaction between Menin and Mixed Lineage Leukemia (MLL). J Med Chem. 2016 Feb 11;59(3):892-913.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C27H25F3N8OS
Molecular Weight
566.60
Exact Mass
566.182
CAS #
1857417-10-7
PubChem CID
117636625
Appearance
White to off-white solid powder
LogP
5
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
11
Rotatable Bond Count
7
Heavy Atom Count
40
Complexity
914
Defined Atom Stereocenter Count
0
SMILES
N1(CC2=CNN=C2)C2=C(C=C(CN3CCC(NC4N=CN=C5SC(CC(F)(F)F)=CC5=4)CC3)C(O)=C2)C=C1C#N
InChi Key
QXLJOBRSTCFLMC-UHFFFAOYSA-N
InChi Code
InChI=1S/C27H25F3N8OS/c28-27(29,30)9-21-7-22-25(32-15-33-26(22)40-21)36-19-1-3-37(4-2-19)14-18-5-17-6-20(10-31)38(23(17)8-24(18)39)13-16-11-34-35-12-16/h5-8,11-12,15,19,39H,1-4,9,13-14H2,(H,34,35)(H,32,33,36)
Chemical Name
6-hydroxy-1-(1H-pyrazol-4-ylmethyl)-5-[[4-[[6-(2,2,2-trifluoroethyl)thieno[2,3-d]pyrimidin-4-yl]amino]piperidin-1-yl]methyl]indole-2-carbonitrile
Synonyms
MI538; MI 538; MI-538
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~176.49 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 10 mg/mL (17.65 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 100.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 10 mg/mL (17.65 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 100.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.

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Solubility in Formulation 3: 2.08 mg/mL (3.67 mM) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), suspension solution; with ultrasonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.7649 mL 8.8246 mL 17.6491 mL
5 mM 0.3530 mL 1.7649 mL 3.5298 mL
10 mM 0.1765 mL 0.8825 mL 1.7649 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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