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Mericitabine

Alias: RG7128; RG-7128; RG 7128; R-7128; R7128; R 7128; PSI 6130 diisobutyrate; PSI 6130 diisobutyrate; RO-5024048; 3',5'-Diisobutyryl PSI 6130; 3',5'-Diisobutyryl PSI 6130; Mericitabine.
Cat No.:V9936 Purity: ≥98%
Mericitabine (RG 7128; R-7128) is a nucleoside HCV (hepatitis C virus) NS5B polymerase inhibitor that works as an RNA chain terminator and prevents elongation of RNA transcripts during replication.
Mericitabine
Mericitabine Chemical Structure CAS No.: 940908-79-2
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
Mericitabine (RG 7128; R-7128) is a nucleoside HCV (hepatitis C virus) NS5B polymerase inhibitor that works as an RNA chain terminator and prevents elongation of RNA transcripts during replication.
Biological Activity I Assay Protocols (From Reference)
Targets
HCV NS5B polymerase
ln Vitro
PSI-6130 is an analogue of cytidine. Mericitabine (RG 7128; R-7128) is an oral prodrug of PSI-6130. According to preclinical data, PSI-6130 exhibits an EC90 value in the HCV replicon test of 4.6±2 μM. Mericitabine (RG 7128; R-7128) has little cytotoxicity, doesn't damage mitochondrial DNA, and is very selective for HCV. Cellular kinases phosphorylate PSI-6130, resulting in the production of an active 5'-triphosphate metabolite that inhibits HCV's NS5B RNA polymerase. Mecitabine (RG 7128; R-7128) has a notable anti-HCV-1 effectiveness and a comparatively acceptable safety profile [2]. Mericitabine is a novel type of nucleoside polymerase inhibitor (NPI) that needs to be absorbed inside the cells and phosphorylated twice to produce two active triphosphates. Oral cytidine nucleoside analog prodrug meretibine (RG 7128; R-7128) has strong antiviral activity against HCV polymerase in all HCV genotypes [3].
ln Vivo
Mericitabine (RG7128) is a nucleoside polymerase inhibitor (NPI), which requires intracellular uptake and phosphorylation to two active triphosphates. Mathematical modeling has provided important insights for characterizing hepatitis C virus (HCV) RNA decline and estimating in vivo effectiveness of antiviral agents; however, it has not been used to characterize viral kinetics with NPIs. HCV RNA was frequently measured in 32 treatment-experienced patients infected with HCV genotype 1 during and after mericitabine monotherapy for 14 days with 750 mg or 1500 mg administered once (qd) or twice daily (bid). The initial decline of HCV RNA was typically slower than with interferon-α or protease inhibitors, and 12 patients presented a novel pattern of HCV RNA kinetics characterized by a monophasic viral decline. Viral kinetics could be well fitted by assuming that the effectiveness in blocking viral production gradually increased over time to reach its final value, ε(2), consistent with previous accumulation time estimates of intracellular triphosphates. ε(2) was high with bid dosing (mean 750 mg and 1500 mg: 98.0% and 99.8%, respectively; P = 0.018) and significantly higher than in patients treated qd (mean qd versus bid: 90% versus 99%, P < 10(-7)). Virus rebounded rapidly upon drug discontinuation, which was attributed to the elimination of active drug and the subsequent decline of drug effectiveness, with mean t(1/2) = 13.9 hours in the bid regimens[3].
Enzyme Assay
Mericitabine (RG7128) is an oral cytidine nucleoside analog prodrug that exhibited strong antiviral effectiveness against the HCV polymerase across all HCV genotypes (9–11), with no evidence of resistance reported in patients treated with mericitabine monotherapy for 14 days (12). Upon entering the hepatocyte, mericitabine is converted to a cytidine monophosphate, which is then further converted to both a cytidine and a uridine triphosphate. Both triphosphate forms are active, with the cytidine form predominating at least early following the initiation of treatment[3].
Animal Protocol
Multiple oral doses of mericitabine were administered for 14 days to 32 HCV-infected patients, split into four cohorts (n=10 patients per cohort with 8 getting drug and 2 taking placebo) with regimens of 750-mg QD, 1500-mg QD, 750-mg BID and 1500-mg BID. Mean changes in HCV RNA per dosing group are displayed in Figure 1[3].
In the INFORM-1 study, 73 patients with chronic hepatitis C virus infection received mericitabine plus danoprevir for up to 13 days. Seventy-two patients experienced a continuous decline in HCV RNA levels during treatment, and of these patients, 14 had viral loads that remained >1,000 IU/ml by day 13 and 1 met the definition for viral breakthrough. In-depth NS5B and NS3/4A population and clonal sequencing studies and mericitabine and danoprevir drug susceptibility testing were performed to assess the variability and quasispecies dynamics before and upon monotherapy or dual therapy. Sequence analysis of the viral quasispecies indicated that the mericitabine resistance mutation S282T was not present at baseline, nor was it selected (even at a low level) during treatment. Protease inhibitor resistance mutations, either as predominant or as minority species, were detected in 18 patients at baseline. No enrichment of minority protease inhibitor-resistant variants present at baseline was observed during treatment; viral population samples were fully susceptible to mericitabine and/or danoprevir, despite the presence within their quasispecies of minority variants confirmed to have reduced susceptibility to danoprevir or other protease inhibitors. It was also observed that certain NS3 amino acid substitutions affected protease inhibitor drug susceptibility in a compound-specific manner and varied with the genetic context. In summary, the slower kinetics of viral load decline observed in some patients was not due to the selection of danoprevir or mericitabine resistance during treatment. Over 2 weeks' therapy, mericitabine suppressed the selection of danoprevir resistance, results that could differ upon longer treatment periods.[1]
References

[1]. Characterization of HCV quasispecies dynamics upon short term dual-therapy with the HCV NS5B nucleoside polymerase inhibitor mericitabine and the NS3/4 protease inhibitor danoprevir. Antimicrob Agents Chemother. 2012 Nov;56(11):5494-5.

[2]. Directly acting antivirals against hepatitis C virus. J Antimicrob Chemother. 2011 Aug;66(8):1673-86.

[3]. Hepatitis C viral kinetics with the nucleoside polymerase inhibitor mericitabine (RG7128). Hepatology. 2012 Apr;55(4):1030-7.

Additional Infomation
Mericitabine has been investigated for the treatment of Hepatitis C, Chronic. Mericitabine is a polymerase inhibitor being developed for the treatment of chronic hepatitis C. Mericitabine is a prodrug of PSI-6130, which demonstrated excellent potency in preclinical studies. PSI-6130 is a pyrimidine nucleoside analog inhibitor of HCV RNA polymerase, an enzyme that is necessary for hepatitis C viral replication.
Mericitabine is an orally available prodrug of PSI-6130 which is a selective cytidine nucleoside analogue and non-cytotoxic hepatitis C virus (HCV) polymerase inhibitor. After intracellular uptake, mericitabine is phosphorylated into two active triphosphate metabolites, which disable HCV RNA-dependent RNA polymerase (non-structural protein 5B; NS5B) upon binding. This results in the blockage of viral HCV RNA production and thus viral replication. This agent has a high barrier to resistance, however, a substitution mutation (S282T) on HCV NS5B impairs mericitabine's activity significantly.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C18H26FN3O6
Molecular Weight
399.4194
Exact Mass
399.181
Elemental Analysis
C, 54.13; H, 6.56; F, 4.76; N, 10.52; O, 24.03
CAS #
940908-79-2
PubChem CID
16122663
Appearance
White to off-white solid powder
LogP
1.56
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
7
Rotatable Bond Count
8
Heavy Atom Count
28
Complexity
707
Defined Atom Stereocenter Count
4
SMILES
CC(C)C(=O)OC[C@@H]1[C@H]([C@@]([C@@H](O1)N2C=CC(=NC2=O)N)(C)F)OC(=O)C(C)C
InChi Key
MLESJYFEMSJZLZ-MAAOGQSESA-N
InChi Code
InChI=1S/C18H26FN3O6/c1-9(2)14(23)26-8-11-13(28-15(24)10(3)4)18(5,19)16(27-11)22-7-6-12(20)21-17(22)25/h6-7,9-11,13,16H,8H2,1-5H3,(H2,20,21,25)/t11-,13-,16-,18-/m1/s1
Chemical Name
(2R,3R,4R,5R)-5-(4-amino-2-oxopyrimidin-1(2H)-yl)-4-fluoro-2-((isobutyryloxy)methyl)-4-methyltetrahydrofuran-3-yl isobutyrate
Synonyms
RG7128; RG-7128; RG 7128; R-7128; R7128; R 7128; PSI 6130 diisobutyrate; PSI 6130 diisobutyrate; RO-5024048; 3',5'-Diisobutyryl PSI 6130; 3',5'-Diisobutyryl PSI 6130; Mericitabine.
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~250.37 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (6.26 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (6.26 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (6.26 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.5036 mL 12.5182 mL 25.0363 mL
5 mM 0.5007 mL 2.5036 mL 5.0073 mL
10 mM 0.2504 mL 1.2518 mL 2.5036 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
NCT Number Recruitment interventions Conditions Sponsor/Collaborators Start Date Phases
NCT01482403 COMPLETED Drug: Copegus
Drug: Copegus
Drug: Pegasys
Hepatitis C, Chronic Hoffmann-La Roche 2011-11 Phase 2
NCT01482390 COMPLETED Drug: Ribavirin
Drug: Mericitabine
Drug: Peginterferon Alfa-2a
Hepatitis C Hoffmann-La Roche 2011-11-30 Phase 2
NCT01168856 TERMINATEDWITH RESULTS Hepatitis C, Chronic Hoffmann-La Roche 2010-09
Biological Data
  • (A) Viral load (VL) kinetics of patients (boxed numbers) in cohort A who received mericitabine alone on days 1 to 3 and then mericitabine plus danoprevir on days 4 to 7; (B) viral load kinetics of patients in cohort A who received danoprevir alone on days 1 to 3 and then mericitabine plus danoprevir on days 4 to 7; (C) viral load kinetics of patients in cohort D. Includes a patient with a D168E resistance mutation (patient 19) who received mericitabine and danoprevir for 13 days. Other patients from the same cohort are presented as a comparison (patients 20, 23, 24, and 31 received placebo).[1]. Le Pogam S, et al. Characterization of HCV quasispecies dynamics upon short term dual-therapy with the HCV NS5B nucleoside polymerase inhibitor mericitabine and the NS3/4 protease inhibitor danoprevir. Antimicrob Agents Chemother. 2012 Nov;56(11):5494-5
  • (A) Phenotypic characterization of susceptibility to mericitabine in samples obtained at baseline and during treatment from 10 patients in cohort A with an end-of-treatment serum HCV RNA level of ≥1,000 IU/ml; (B) phenotypic characterization of susceptibility to danoprevir in samples obtained at baseline and during treatment from 10 patients in cohort A with an end-of-treatment serum HCV RNA level of ≥1,000 IU/ml.[1]. Le Pogam S, et al. Characterization of HCV quasispecies dynamics upon short term dual-therapy with the HCV NS5B nucleoside polymerase inhibitor mericitabine and the NS3/4 protease inhibitor danoprevir. Antimicrob Agents Chemother. 2012 Nov;56(11):5494-5
  • Presence and viral dynamics of low-frequency PI-resistant variants in cohort A patients with an end-of-treatment serum HCV RNA level of ≥1,000 IU/ml. DNV, danoprevir; MCB, mericitabine.[1]. Le Pogam S, et al. Characterization of HCV quasispecies dynamics upon short term dual-therapy with the HCV NS5B nucleoside polymerase inhibitor mericitabine and the NS3/4 protease inhibitor danoprevir. Antimicrob Agents Chemother. 2012 Nov;56(11):5494-5
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