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MDH1-IN-2

Cat No.:V46633 Purity: ≥98%
MDH1-IN-2 (Compound 7c) is a potent and specific MDH1 inhibitor (antagonist) with IC50 of 2.27 μM.
MDH1-IN-2
MDH1-IN-2 Chemical Structure CAS No.: 2143463-35-6
Product category: New3
This product is for research use only, not for human use. We do not sell to patients.
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1mg
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Product Description
MDH1-IN-2 (Compound 7c) is a potent and specific MDH1 inhibitor (antagonist) with IC50 of 2.27 μM. MDH1-IN-2 may be used for studying cancer diseases.
MDH1-IN-2 (Compound 7c) is a potent and selective inhibitor of Malate Dehydrogenase 1 (MDH1), a key enzyme in cellular metabolism. It has potential anticancer activity and may be useful for studying diseases related to the immune system.
Biological Activity I Assay Protocols (From Reference)
Targets
MDH1-IN-2 selectively targets Malate Dehydrogenase 1 (MDH1), an enzyme involved in the malate-aspartate shuttle and the TCA cycle, with an IC50 of 2.27 microM.
ln Vitro
By inhibiting MDH1, MDH1-IN-2 effectively reduces the conversion of 2-ketoglutaric acid to alpha-hydroxyglutaric acid, thereby mitigating 2-ketoglutaric acid-induced ferroptosis. This mechanism contributes to its potential anticancer activity.
ln Vivo
Dedicated in vivo studies for MDH1-IN-2 are not extensively documented. However, based on its mechanism of MDH1 inhibition, it has shown potential in reducing tumor proliferation and enhancing the effectiveness of other anticancer treatments in preclinical models.
Enzyme Assay
For enzyme inhibition assays, recombinant MDH1 enzyme is incubated with its substrate (oxaloacetate) and NADH. The enzymatic activity is measured spectrophotometrically by monitoring the decrease in absorbance at 340 nm due to NADH oxidation, in the presence or absence of MDH1-IN-2.
Cell Assay
Cancer cell lines are cultured in appropriate media and treated with varying concentrations of MDH1-IN-2. Cell viability is assessed after 48-72 hours using MTT or CellTiter-Glo assays. The IC50 for growth inhibition is calculated from the dose-response curves.
Animal Protocol
In vivo protocols would typically involve establishing tumor xenografts in immunodeficient mice. MDH1-IN-2 would be administered via intraperitoneal or oral routes. Tumor growth inhibition is measured, and metabolic markers such as reactive oxygen species levels in tumor tissues would be analyzed.
ADME/Pharmacokinetics
Detailed PK parameters for MDH1-IN-2 are not extensively documented. As a small molecule with acceptable solubility in DMSO, it is typically formulated for intraperitoneal injection or oral gavage in research settings. Comprehensive ADME studies are not reported.
Toxicity/Toxicokinetics
Toxicological profiles are not well-documented. Given its mechanism targeting a metabolic enzyme, it is expected to have a manageable safety profile. Standard in vitro cytotoxicity assays suggest it has an acceptable window for further development.
Additional Infomation
MDH1-IN-2 is designated as Compound 7c and is a research tool for studying the role of MDH1 in cancer metabolism and ferroptosis. Its ability to modulate ROS levels makes it distinct from traditional cytotoxic agents.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C25H33NO5
Molecular Weight
427.53
Exact Mass
427.235
CAS #
2143463-35-6
PubChem CID
137633077
Appearance
Typically exists as solid at room temperature
LogP
6
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
10
Heavy Atom Count
31
Complexity
589
Defined Atom Stereocenter Count
0
SMILES
CC(C)(C)CC(C)(C)C1=CC=C(C=C1)OCC(=O)NC2=C(C=CC(=C2)C(=O)OC)OC
InChi Key
MHYUTDIUXARMRO-UHFFFAOYSA-N
InChi Code
InChI=1S/C25H33NO5/c1-24(2,3)16-25(4,5)18-9-11-19(12-10-18)31-15-22(27)26-20-14-17(23(28)30-7)8-13-21(20)29-6/h8-14H,15-16H2,1-7H3,(H,26,27)
Chemical Name
methyl 4-methoxy-3-[[2-[4-(2,4,4-trimethylpentan-2-yl)phenoxy]acetyl]amino]benzoate
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~25 mg/mL (~58.48 mM)
Solubility (In Vivo)
Solubility in Formulation 1: 1 mg/mL (2.34 mM) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), suspension solution; with sonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 10.0 mg/mL clear DMSO stock solution to 400 μL of PEG300 and mix evenly; then add 50 μL of Tween-80 to the above solution and mix evenly; then add 450 μL of normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: 1 mg/mL (2.34 mM) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), suspension solution; with ultrasonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 10.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 1 mg/mL (2.34 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 10.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.3390 mL 11.6951 mL 23.3902 mL
5 mM 0.4678 mL 2.3390 mL 4.6780 mL
10 mM 0.2339 mL 1.1695 mL 2.3390 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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