yingweiwo

MC-Val-Cit-PAB-clindamycin

Cat No.:V32411 Purity: ≥98%
MC-Val-Cit-PAB-clindamycin is a part of the antibody coupling active molecule, which is connected by the protein synthesis inhibitor clindamycin and the ADC linker MC-Val-Cit-PAB.
MC-Val-Cit-PAB-clindamycin
MC-Val-Cit-PAB-clindamycin Chemical Structure CAS No.: 1639793-13-7
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
25mg
50mg
Other Sizes
Official Supplier of:
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text

 

  • Business Relationship with 5000+ Clients Globally
  • Major Universities, Research Institutions, Biotech & Pharma
  • Citations by Top Journals: Nature, Cell, Science, etc.
Top Publications Citing lnvivochem Products
Product Description
MC-Val-Cit-PAB-clindamycin is a part of the antibody coupling active molecule, which is connected by the protein synthesis inhibitor clindamycin and the ADC linker MC-Val-Cit-PAB.
MC-Val-Cit-PAB-clindamycin (CAS#: 1639793-13-7) is a drug-linker conjugate designed for antibody-drug conjugate (ADC) applications. It combines the antibiotic clindamycin, a protein synthesis inhibitor that binds to the 50S ribosomal subunit, with the MC-Val-Cit-PAB peptide linker. This conjugate is designed for targeted delivery of the clindamycin payload to specific cell populations. The molecular weight is 980.63 with formula C4₆H₇2ClN₈O11S, and standard purity is ≥95%.
Biological Activity I Assay Protocols (From Reference)
Targets
The primary target of MC-Val-Cit-PAB-clindamycin is the bacterial 50S ribosomal subunit, where clindamycin inhibits protein synthesis. In ADC applications, the conjugate targets cancer cells or other diseased cells via antibody-mediated recognition of cell surface antigens. The MC-Val-Cit-PAB linker is designed for cathepsin B-mediated cleavage, enabling intracellular payload release. The compound is described as having potent antitumor properties.
ln Vitro
MC-Val-Cit-PAB-clindamycin exhibits potent antitumor activity in vitro through the action of the clindamycin payload, which functions as a protein synthesis inhibitor. The conjugate demonstrates effective cell killing when incorporated into ADC constructs with appropriate targeting antibodies. The MC-Val-Cit-PAB linker enables efficient intracellular release following antibody-mediated internalization. Standard purity is ≥95-99.99%.
ln Vivo
In vivo, MC-Val-Cit-PAB-clindamycin demonstrates potent antitumor activity when used in ADC formats. The conjugate is designed for stability in systemic circulation while enabling targeted payload delivery and selective release within target cells. The clindamycin payload exerts its antiproliferative effects following intracellular release and ribosomal binding. The MC-Val-Cit-PAB linker system has been validated in multiple ADC platforms for effective in vivo performance.
Enzyme Assay
In vitro enzyme/receptor binding assays for MC-Val-Cit-PAB-clindamycin typically involve assessing linker stability and payload release kinetics. Cathepsin B cleavage assays are performed by incubating the conjugate with recombinant cathepsin B at pH 5.5, followed by HPLC or LC-MS analysis to quantify clindamycin release over time. Ribosome binding assays may be used to confirm the retained activity of the clindamycin payload. Stability studies in plasma are conducted to evaluate conjugate integrity.
Cell Assay
In vitro cellular assays for MC-Val-Cit-PAB-clindamycin ADC conjugates involve treating antigen-positive and antigen-negative cell lines with varying concentrations (typically 0.001-100 nM range) for 72-120 hours. Cell viability is measured using standard assays including MTT, CellTiter-Glo, or resazurin-based methods. Internalization studies using fluorescently labeled constructs confirm antibody-mediated uptake. IC50 values are determined by fitting dose-response curves. Appropriate controls include naked antibody and free payload.
Animal Protocol
In vivo animal studies for MC-Val-Cit-PAB-clindamycin ADC conjugates typically use xenograft mouse models. Tumor-bearing mice are administered the ADC intravenously at doses ranging from 1-30 mg/kg, with schedules such as single dose, QD×5, or QW×2. Tumor growth inhibition is monitored over 2-4 weeks. Endpoints include tumor volume, body weight, and survival. Pharmacodynamic assessments may include measurement of target engagement and downstream biomarkers in tumor tissue.
ADME/Pharmacokinetics
Pharmacokinetic properties of MC-Val-Cit-PAB-clindamycin conjugates follow typical ADC PK profiles. Following IV administration, the conjugate shows biphasic elimination with appropriate stability in circulation. The MC-Val-Cit-PAB linker provides controlled release characteristics. PK parameters including clearance, volume of distribution, and half-life are determined via ELISA for total antibody and conjugated antibody, and LC-MS/MS for free payload. Bioavailability is not applicable for IV administration.
Toxicity/Toxicokinetics
Toxicological data for MC-Val-Cit-PAB-clindamycin is characteristic of ADC linker-payload constructs. Clindamycin is an established antibiotic with known safety profiles. As a research chemical, standard laboratory safety precautions should be followed including PPE and use of a fume hood. Comprehensive toxicology including repeat-dose and genotoxicity studies would be required for clinical development but are not publicly available for this specific conjugate.
References

[1]. Targeted drug delivery through the traceless release of tertiary and heteroaryl amines from antibody-drug conjugates. Nat Chem. 2016 Dec;8(12):1112-1119.

Additional Infomation
MC-Val-Cit-PAB-clindamycin (CAS# 1639793-13-7) is a research-grade drug-linker conjugate for ADC development. It is not approved for clinical use. The compound represents an approach to repurpose antibiotics as ADC payloads for cancer therapy. The MC-Val-Cit-PAB linker is a well-characterized, cathepsin B-cleavable system widely used in ADC research. This conjugate enables investigation of clindamycin as a payload for targeted therapeutics. The compound is typically stored at -20degC under inert atmosphere.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C46H72CLN8O11S
Molecular Weight
980.63
Exact Mass
979.472
CAS #
1639793-13-7
PubChem CID
139035083
Appearance
White to off-white solid powder
LogP
2.3
Hydrogen Bond Donor Count
9
Hydrogen Bond Acceptor Count
12
Rotatable Bond Count
25
Heavy Atom Count
67
Complexity
1720
Defined Atom Stereocenter Count
11
SMILES
C([C@@H]1C[C@@H](CCC)C[N+]1(C)CC1C=CC(NC(=O)[C@H](CCCNC(=O)N)NC(=O)[C@H](C(C)C)NC(=O)CCCCCN2C(C=CC2=O)=O)=CC=1)(=O)N[C@@]([H])([C@]1([H])[C@@H]([C@H](O)[C@@H](O)[C@@H](SC)O1)O)[C@@H](Cl)C
InChi Key
KINAEBJVJLCQDX-DCAHZPCSSA-O
InChi Code
InChI=1S/C46H71ClN8O11S/c1-7-12-29-23-32(43(63)53-37(27(4)47)41-39(60)38(59)40(61)45(66-41)67-6)55(5,25-29)24-28-15-17-30(18-16-28)50-42(62)31(13-11-21-49-46(48)65)51-44(64)36(26(2)3)52-33(56)14-9-8-10-22-54-34(57)19-20-35(54)58/h15-20,26-27,29,31-32,36-41,45,59-61H,7-14,21-25H2,1-6H3,(H6-,48,49,50,51,52,53,56,62,63,64,65)/p+1/t27-,29+,31-,32-,36-,37+,38-,39+,40+,41+,45+,55?/m0/s1
Chemical Name
(2S,4R)-1-[[4-[[(2S)-5-(carbamoylamino)-2-[[(2S)-2-[6-(2,5-dioxopyrrol-1-yl)hexanoylamino]-3-methylbutanoyl]amino]pentanoyl]amino]phenyl]methyl]-N-[(1S,2S)-2-chloro-1-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-methylsulfanyloxan-2-yl]propyl]-1-methyl-4-propylpyrrolidin-1-ium-2-carboxamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~110 mg/mL (~108.26 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (2.46 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (2.46 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

View More

Solubility in Formulation 3: ≥ 2.5 mg/mL (2.46 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.0198 mL 5.0988 mL 10.1975 mL
5 mM 0.2040 mL 1.0198 mL 2.0395 mL
10 mM 0.1020 mL 0.5099 mL 1.0198 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
/

Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
+
+
+

Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Contact Us