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I2906

Cat No.:V30877 Purity: ≥98%
I2906 has activity against Mycobacterium tuberculosis (TB).
I2906
I2906 Chemical Structure CAS No.: 331963-29-2
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
100mg
500mg
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Product Description
I2906 has activity against Mycobacterium tuberculosis (TB).
I2906 (CAS 331963-29-2) is a novel compound known for its potent antimycobacterial activity, particularly against Mycobacterium tuberculosis, the causative agent of tuberculosis (TB). It has shown promising results in both in vitro and in vivo studies. I2906 is also a novel isocitrate lyase (ICL) inhibitor. It has demonstrated excellent antimycobacterial activities and low cytotoxicity. The compound has also been shown to have a positive effect on the skeleton, potentially due to its ability to inhibit the glyoxylate pathway, making it a potential candidate for the development of new antitubercular agents.
Biological Activity I Assay Protocols (From Reference)
Targets
The primary target of I2906 is the enzyme isocitrate lyase (ICL) in Mycobacterium tuberculosis. ICL is a key enzyme in the glyoxylate shunt, a pathway essential for the survival and persistence of M. tuberculosis within host macrophages. By inhibiting ICL, I2906 disrupts the bacterium's ability to utilize fatty acids as a carbon source during infection, thereby inhibiting its growth and survival. It is believed to inhibit the synthesis of essential components of the bacterial cell wall, leading to cell death, potentially through the disruption of this metabolic pathway.
ln Vitro
In vitro, I2906 showed excellent antimycobacterial activities against M. tuberculosis. The minimum inhibitory concentration (MIC) was determined to be 134.4 ug/mL against clinical isolates. It has also demonstrated low cytotoxicity in vitro, indicating a favorable selectivity index for the bacterial target. As an isocitrate lyase inhibitor, its activity is linked to the inhibition of the glyoxylate pathway, which is crucial for the persistence of M. tuberculosis. It is also noted to have cytotoxic activity, although this is secondary to its primary antibacterial effect.
ln Vivo
In vivo, I2906 has demonstrated efficacy in a murine model infected with M. tuberculosis. Studies have shown that it can reduce bacterial load in infected animal models. It has shown good activity against M. tuberculosis. Its ability to inhibit the glyoxylate pathway is thought to contribute to its in vivo efficacy. Its activity against M. tuberculosis in animal models supports its potential as a new therapeutic agent for tuberculosis, particularly against persistent infections.
Enzyme Assay
Cell-free enzyme assays for I2906 typically assess its inhibition of isocitrate lyase (ICL). A standard protocol involves incubating recombinant M. tuberculosis ICL with its substrate, isocitrate, and varying concentrations of I2906 in a reaction buffer. The reaction is carried out at 37degC, and the production of glyoxylate and succinate is measured using a coupled enzymatic assay or by high-performance liquid chromatography (HPLC). The IC50 value, representing the concentration of I2906 required for half-maximal enzyme inhibition, is determined from the dose-response curve.
Cell Assay
For in vitro cellular experiments, Mycobacterium tuberculosis cultures are grown in Middlebrook 7H9 medium. Bacteria are treated with I2906 at various concentrations (typically 0.1-100 ug/mL) and incubated at 37degC for several days. The minimum inhibitory concentration (MIC) is determined by visual inspection or by measuring the optical density (OD600) of the culture. To assess cytotoxicity, mammalian cell lines (e.g., Vero cells) are treated with the compound, and cell viability is measured using MTT or resazurin assays.
Animal Protocol
In vivo animal experiments with I2906 are conducted in a murine model of tuberculosis. A common protocol involves infecting mice with M. tuberculosis via aerosol or intravenous injection. After the infection is established, I2906 is administered orally or intraperitoneally at various doses (e.g., 10-100 mg/kg) for several weeks. The compound's efficacy is assessed by measuring the bacterial load (colony-forming units, CFU) in the lungs and spleen of the treated animals compared to untreated controls.
ADME/Pharmacokinetics
I2906 has a molecular weight of 443.6 g/mol and a molecular formula of C25H37N3O4. It is soluble in DMSO at 10 mM. As a small molecule, it is suitable for oral or intraperitoneal administration in animal models. Its pharmacokinetic properties, including absorption, distribution, metabolism, and excretion (ADME), are consistent with a drug-like molecule. It is stored at -20degC, protected from light and moisture, and is stable for long-term storage.
Toxicity/Toxicokinetics
I2906 has demonstrated low cytotoxicity in preclinical studies, suggesting a favorable safety profile. In vitro, it shows excellent antimycobacterial activity with a low toxicity profile. In animal models, it has shown good tolerability at therapeutic doses. However, as with any antimicrobial agent, potential side effects and long-term toxicity need to be evaluated. The compound is for research use only and not for human use. It should be handled with standard laboratory precautions in a biosafety cabinet due to its activity against pathogenic bacteria.
References

[1]. In vitro and in vivo Activities of a New Lead Compound I2906 against Mycobacterium tuberculosis. Pharmacology (2010), 85(6), 365-371.

Additional Infomation
I2906 is a novel small molecule inhibitor of isocitrate lyase (ICL) with potent antimycobacterial activity against M. tuberculosis. It has shown excellent activity in vitro and in vivo with low cytotoxicity. Its mechanism of action involves inhibiting the glyoxylate pathway, which is essential for the persistence of M. tuberculosis. This makes it a promising candidate for the development of new anti-TB drugs, particularly those aimed at treating persistent and drug-resistant infections.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C25H37N3O4
Molecular Weight
443.57898
Exact Mass
443.278
CAS #
331963-29-2
PubChem CID
54679506
Appearance
White to off-white solid powder
LogP
6.214
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
13
Heavy Atom Count
32
Complexity
662
Defined Atom Stereocenter Count
0
InChi Key
WIEYSVJHCLJOJT-UHFFFAOYSA-N
InChi Code
InChI=1S/C25H37N3O4/c1-3-5-6-7-8-9-10-11-12-13-18-21(29)26-27-24(31)22-23(30)19-16-14-15-17-20(19)28(4-2)25(22)32/h14-17,30H,3-13,18H2,1-2H3,(H,26,29)(H,27,31)
Chemical Name
1-ethyl-4-hydroxy-2-oxo-N'-tridecanoylquinoline-3-carbohydrazide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~25 mg/mL (~56.36 mM)
Solubility (In Vivo)
Solubility in Formulation 1: 2.5 mg/mL (5.64 mM) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), suspension solution; with sonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (5.64 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.2544 mL 11.2719 mL 22.5438 mL
5 mM 0.4509 mL 2.2544 mL 4.5088 mL
10 mM 0.2254 mL 1.1272 mL 2.2544 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
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  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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