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GSK106

Alias: GSK 106 GSK-106 GSK106
Cat No.:V21805 Purity: ≥98%
GSK106 (GSK-106) is a used as a negative control for thebinding and functional assays of PAD4 inhibitors (e.
GSK106
GSK106 Chemical Structure CAS No.: 1652591-82-6
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
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5mg
10mg
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50mg
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Product Description
GSK106 (GSK-106) is a used as a negative control for the binding and functional assays of PAD4 inhibitors (e.g. GSK484 and GSK199).
GSK106 is a well-characterized, commercially available chemical probe primarily utilized as a negative control in studies of Protein Arginine Deiminase 4 (PAD4). It is the only structurally matched, functionally inert negative control for the GSK484/GSK199 PAD4 inhibitor series. GSK106 is an inactive control for the selective PAD4 inhibitors, GSK484 and GSK199. It does not inhibit PAD4 nor does it prevent the citrullination of PAD4 target proteins or the formation of neutrophil extracellular traps (NETs) in mouse or human neutrophils (IC50s > 100 μM). GSK106 can be used in binding and functional assays for PAD4 inhibitors to confirm that observed effects are specific to PAD4 inhibition and not due to off-target effects of the active compounds. GSK106 is a hydrochloride salt. The compound provides unambiguous on-target validation for PAD4 inhibitor studies. With an IC50 > 100 μM and no effect on citrullination or NET formation, it serves as an essential negative control for distinguishing specific PAD4 inhibition from non-specific effects. Protein citrullination has normal roles in gene regulation and pathological roles in immunological and inflammatory diseases. PAD4 is a key enzyme in the citrullination of histones and other proteins, playing important roles in NET formation, gene regulation, and inflammation.
Biological Activity I Assay Protocols (From Reference)
Targets
Protein Arginine Deiminase 4 (PAD4) - as an inactive control. GSK106 does not inhibit PAD4.
ln Vitro
GSK106 does not inhibit PAD4 nor does it prevent the citrullination of PAD4 target proteins or the formation of neutrophil extracellular traps (NETs) in mouse or human neutrophils (IC50s > 100 μM). It is an inactive control for the selective PAD4 inhibitors, GSK484 and GSK199. GSK106 is the only structurally matched, functionally inert negative control for the GSK484/GSK199 PAD4 inhibitor series. It provides unambiguous on-target validation.
ln Vivo
GSK106 has no in vivo activity as it does not inhibit PAD4. It is used as a negative control in in vivo studies of PAD4 inhibition to confirm that observed effects are specific to PAD4 inhibition and not due to off-target effects of the active compounds (GSK484 and GSK199). GSK106 is administered alongside active PAD4 inhibitors in animal models to validate that the therapeutic effects observed are specifically attributable to PAD4 inhibition.
Enzyme Assay
PAD4 inhibition is assessed using in vitro enzyme assays with recombinant PAD4 enzyme and peptidylarginine substrates. Citrullination is measured by detecting the conversion of arginine to citrulline using colorimetric (e.g., COLDER assay), fluorometric, or antibody-based detection methods (e.g., anti-citrulline antibodies such as F95). GSK106 is tested at various concentrations (typically 0.1-1000 μM) and shown to have no inhibitory activity (IC50 > 100 μM). The active PAD4 inhibitors GSK484 and GSK199 are run in parallel as positive controls.
Cell Assay
Cellular activity is evaluated in neutrophils or other cells where PAD4 activity is relevant. Cells are treated with GSK106 at various concentrations (typically 0.1-1000 μM) alongside active PAD4 inhibitors GSK484 and GSK199. Citrullination of PAD4 target proteins (e.g., histones) is assessed by Western blot using anti-citrulline antibodies (e.g., F95) or by ELISA. Neutrophil extracellular trap (NET) formation is assessed by microscopy (visualization of extracellular DNA fibers with SYTOX Green or DAPI), by measuring extracellular DNA release (e.g., PicoGreen assay), or by ELISA for NET-associated proteins (e.g., MPO-DNA complexes). GSK106 shows no effect on citrullination or NET formation (IC50 > 100 μM).
Animal Protocol
GSK106 is used as a negative control in in vivo studies of PAD4 inhibition. It is administered alongside active PAD4 inhibitors (GSK484 and GSK199) in animal models of inflammatory diseases, autoimmune diseases, or thrombosis. GSK106 is administered via appropriate routes (oral, intraperitoneal, intravenous) at doses matching the active compounds. Citrullination in target tissues (e.g., lung, joints, blood) is assessed by immunohistochemistry or Western blot using anti-citrulline antibodies. NET formation in vivo is assessed by measuring circulating NET markers (e.g., MPO-DNA complexes, citrullinated histone H3) in plasma or tissue. Inflammatory markers and disease severity are compared between GSK106-treated and active inhibitor-treated groups to validate target specificity. Specific protocols are detailed in the primary literature.
ADME/Pharmacokinetics
GSK106 has a molecular formula of C24H28ClN5O (hydrochloride salt) and a molecular weight of 437.97 g/mol. CAS Number: 1652591-82-6. It is an inactive control compound. Purity: typically ≥98% by HPLC. The compound is soluble in DMSO and water (as hydrochloride salt). Storage: store at -20°C for long-term stability, protected from light and moisture. Detailed pharmacokinetic parameters are not relevant as it is used as a negative control.
Toxicity/Toxicokinetics
Safety data for GSK106 indicate it is a research compound for laboratory use only. Use full personal protective equipment. Avoid breathing vapors, mist, dust or gas. Ensure adequate ventilation. Evacuate personnel to safe areas. Avoid inhalation, contact with eyes and skin. Avoid dust and aerosol formation. Use only in areas with appropriate exhaust ventilation. The compound is for research use only and not for human therapeutic applications. Consult the material safety data sheet (MSDS) for detailed safety information, including potential hazards and disposal considerations.
References

[1]. Inhibition of PAD4 activity is sufficient to disrupt mouse and human NET formation. Nat Chem Biol. 2015 Mar;11(3):189-91.

Additional Infomation
GSK106 is a research tool compound used as a negative control for PAD4 studies. It is not approved for clinical use. The compound is used to validate that effects observed with PAD4 inhibitors GSK484 and GSK199 are specific to PAD4 inhibition. GSK106 is the only structurally matched, functionally inert negative control for the GSK484/GSK199 PAD4 inhibitor series. With an IC50 > 100 μM and no effect on citrullination or NET formation, it provides unambiguous on-target validation. Protein citrullination has normal roles in gene regulation and pathological roles in immunological and inflammatory diseases. GSK106 is an essential tool for distinguishing specific PAD4 inhibition from non-specific effects in both biochemical and cellular assays.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C24H28CLN5O
Molecular Weight
437.97
Exact Mass
437.198
CAS #
1652591-82-6
PubChem CID
86340171
Appearance
Off-white to light yellow solid powder
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
3
Rotatable Bond Count
3
Heavy Atom Count
31
Complexity
629
Defined Atom Stereocenter Count
0
InChi Key
VRPFLFUQMWOJAT-UHFFFAOYSA-N
InChi Code
InChI=1S/C24H27N5O.ClH/c1-3-29-20-9-5-4-7-16(20)13-22(29)23-26-19-11-10-17(14-21(19)27(23)2)24(30)28-12-6-8-18(25)15-28;/h4-5,7,9-11,13-14,18H,3,6,8,12,15,25H2,1-2H3;1H
Chemical Name
(3-aminopiperidin-1-yl)-[2-(1-ethylindol-2-yl)-3-methylbenzimidazol-5-yl]methanone;hydrochloride
Synonyms
GSK 106 GSK-106 GSK106
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~228.33 mM)
Solubility (In Vivo)
Solubility in Formulation 1: 2.5 mg/mL (5.71 mM) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), suspension solution; with sonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (5.71 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: 2.5 mg/mL (5.71 mM) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), suspension solution; with ultrasonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.2833 mL 11.4163 mL 22.8326 mL
5 mM 0.4567 mL 2.2833 mL 4.5665 mL
10 mM 0.2283 mL 1.1416 mL 2.2833 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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