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Gardenin B

Cat No.:V31102 Purity: ≥98%
Gardenin B is a natural flavonoid extracted from Gardenia jasminoides.
Gardenin B
Gardenin B Chemical Structure CAS No.: 2798-20-1
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
Gardenin B is a natural flavonoid extracted from Gardenia jasminoides. Gardenin B can induce the death of human leukemia cells, and the induced apoptosis is related to multiple caspases.
Biological Activity I Assay Protocols (From Reference)
Targets
- Caspase family (caspase-3, caspase-8, caspase-9) [1]
- Apoptosis-related proteins (Bax, Bcl-2) [1]
- Human leukemia cells (HL-60: IC50 = 12.5 ± 1.3 μM; U937: IC50 = 15.7 ± 1.5 μM) [1]
ln Vitro
- Gardenin B exhibited dose-dependent cytotoxicity against human leukemia cells. For HL-60 cells, IC50 was 12.5 ± 1.3 μM; for U937 cells, IC50 was 15.7 ± 1.5 μM (48-hour incubation) [1]
- It induced apoptosis in leukemia cells: 20 μM Gardenin B increased the apoptotic rate of HL-60 cells by 58±4% and U937 cells by 52±3% (Annexin V-FITC/PI staining) [1]
- The compound activated multiple caspases: 20 μM increased cleaved caspase-3, -8, -9 protein levels by 3.2±0.3, 2.8±0.2, and 2.5±0.2-fold, respectively, in HL-60 cells [1]
- It altered the Bax/Bcl-2 ratio: 20 μM elevated the Bax/Bcl-2 ratio by 3.8±0.3-fold in HL-60 cells, promoting mitochondrial apoptotic pathway activation [1]
- It did not induce reactive oxygen species (ROS) generation: Even at 30 μM, ROS levels in HL-60 cells showed no significant difference from the control group [1]
- It showed low cytotoxicity to normal human peripheral blood mononuclear cells (PBMCs): Cell viability remained above 80% at concentrations up to 30 μM [1]
Enzyme Assay
- Caspase activity assay: HL-60 cells were treated with Gardenin B (10, 20, 30 μM) for 24 hours. Cell lysates were incubated with caspase-3/-8/-9 specific fluorogenic substrates, and fluorescence intensity was measured at excitation/emission wavelengths of 400/505 nm to quantify caspase activity [1]
- ROS detection assay: Leukemia cells were loaded with a ROS-specific fluorescent probe after treatment with Gardenin B (10–30 μM) for 24 hours. Fluorescence at 488/525 nm was detected to confirm no ROS overproduction [1]
Cell Assay
- Cell viability assay: HL-60 and U937 cells were seeded in 96-well plates (5×10³ cells/well) and incubated overnight. Gardenin B (5–30 μM) was added, and cells were cultured for 48 hours. MTT reagent was added, and absorbance was measured at 570 nm to calculate IC50 values [1]
- Apoptosis detection assay: Leukemia cells were treated with Gardenin B (10, 20 μM) for 48 hours, stained with Annexin V-FITC and PI, and analyzed by flow cytometry to determine apoptotic rates [1]
- Protein expression assay: Cells were treated with the compound (10, 20 μM) for 24 hours. Total protein was extracted for Western blot analysis of cleaved caspase-3/-8/-9, Bax, and Bcl-2 [1]
- Normal cell cytotoxicity assay: Human PBMCs were treated with Gardenin B (10–30 μM) for 48 hours, and cell viability was measured by MTT assay [1]
Toxicity/Toxicokinetics
Selective toxicity: It has strong cytotoxicity to leukemia cells (IC50 12.5–15.7 μM), but low toxicity to normal peripheral blood mononuclear cells (PBMCs) (cell viability >80% at 30 μM) [1]
- No oxidative stress induction: It does not produce reactive oxygen species (ROS) in leukemia cells, avoiding non-specific oxidative damage [1]
References

[1]. Gardenin B-induced cell death in human leukemia cells involves multiple caspases but is independent of the generation of reactive oxygen species. Chem Biol Interact. 2016 Aug 25;256:220-7.

Additional Infomation
Gardenin B is a tetramethoxyflavonoid, a derivative of hesperidin in which the methoxy group at the 5-position is replaced by a hydroxyl group. It is a plant metabolite. It is both a tetramethoxyflavonoid and a monohydroxyflavonoid. Its function is related to that of hesperidin. Gardenin B has been reported to be found in citrus (Citrus tankan), citrus (Citrus reticulata), and other organisms with relevant data.
- Citrus fulvic acid B is a natural flavonoid compound isolated from plants[1]
- Its anti-leukemia mechanism involves activation of caspase-dependent apoptosis pathways (endogenous and exogenous pathways), specifically by upregulating Bax, downregulating Bcl-2, and cleaving caspase-3/-8/-9[1]
- The cell death it induces is independent of the production of reactive oxygen species (ROS), which distinguishes it from ROS-mediated anticancer drugs[1]
- Due to its selective toxicity to leukemia cells, it shows potential as a candidate drug for targeted anti-leukemia[1]
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C19H18O7
Molecular Weight
358.3420
Exact Mass
358.105
CAS #
2798-20-1
PubChem CID
96539
Appearance
Light yellow to green yellow solid powder
Density
1.3±0.1 g/cm3
Boiling Point
582.0±50.0 °C at 760 mmHg
Melting Point
180-181ºC
Flash Point
210.8±23.6 °C
Vapour Pressure
0.0±1.7 mmHg at 25°C
Index of Refraction
1.593
LogP
2.27
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
7
Rotatable Bond Count
5
Heavy Atom Count
26
Complexity
526
Defined Atom Stereocenter Count
0
InChi Key
LXEVSYZNYDZSOB-UHFFFAOYSA-N
InChi Code
InChI=1S/C19H18O7/c1-22-11-7-5-10(6-8-11)13-9-12(20)14-15(21)17(23-2)19(25-4)18(24-3)16(14)26-13/h5-9,21H,1-4H3
Chemical Name
5-hydroxy-6,7,8-trimethoxy-2-(4-methoxyphenyl)chromen-4-one
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~10 mg/mL (~27.91 mM)
Solubility (In Vivo)
Solubility in Formulation 1: 2.5 mg/mL (6.98 mM) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), suspension solution; with sonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

Solubility in Formulation 2: 1.67 mg/mL (4.66 mM) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), suspension solution; with ultrasonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 16.7 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.7906 mL 13.9532 mL 27.9065 mL
5 mM 0.5581 mL 2.7906 mL 5.5813 mL
10 mM 0.2791 mL 1.3953 mL 2.7906 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
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