ETP-46464

Alias: ETP46464;ETP 46464;ETP-46464; ATM Inhibitor III; ATR Inhibitor III
Cat No.:V0204 Purity: ≥98%
ETP-46464 (ETP46464) is a novel, potent and selective inhibitor of ATR (Ataxia-telangiectasia mutated) and mTOR (mammalian target of rapamycin) with potential anticancer activity.
ETP-46464 Chemical Structure CAS No.: 1345675-02-6
Product category: ATM(ATR)
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
ETP-46464 (ETP46464) is a novel, potent and selective inhibitor of ATR (Ataxia-telangiectasia mutated) and mTOR (mammalian target of rapamycin) with potential anticancer activity. It has an IC50 of 25 nM for ATR inhibition and 0.6 nM for mTOR inhibition. At IC50s of 170 and 545 nM, respectively, it also inhibits ATM and PI3Kα. Stalled replication forks break chromosomally when ATR, a DNA damage response kinase, is inhibited by ETP-46464. This is known to cause replicative stress.
Biological Activity I Assay Protocols (From Reference)
Targets
mTOR ( IC50 = 0.6 nM ); ATR ( IC50 = 14 nM ); ATM ( IC50 = 545 nM ); DNA-PK ( IC50 = 36 nM ); PI3Kα ( IC50 = 170 nM )
ln Vitro

ETP-46464 (ATRi) also inhibits DNA-PK, PI3Kα and ATM with IC50s of 36 nM, 170 nM and 545 nM, respectively[1]. Cell lines with platinum-sensitive and -resistant ovarian, endometrial, and cervical cancer are treated for 72 hours with different dosages of cisplatin (0-50 µM), with or without KU55933 (10.0 µM) and/or ETP-46464 (5.0 µM). A subset of cell lines' single-agent dose response analyses for ETP-46464 and KU55933 show broad LD50 ranges of 10.0±8.7 and 38.3±7.6 µM, respectively. These investigations, along with previously documented evidence of phospho-Chk1 (Ser345) and phospho-ATM (Ser1981) inhibition after ionizing radiation exposure and dose response treatments with ETP-46464 and KU55933, are used to determine co-treatment doses. In all tested cell lines, treatment with ETP-46464 dramatically boosts the response of Cisplatin, resulting in 52–89% increase in activity and synergistic effects. When ATR and ATM are inhibited simultaneously, the response of Cisplatin is increased to a degree comparable to when ETP-46464 is used alone. These effects are seen in all tested gynecologic (GYN) cancer cells and are not dependent on the p53 status. These GYN cancer cell lines respond better to carboplatin when treated with ETP-46464 rather than KU55933, which also makes the cell lines more sensitive to cisplatin[2].

ln Vivo
N/A
Enzyme Assay
Compounds (e.g., ETP-46464) and master suppressors are introduced straight into the cell medium (100 μL in each well) using a multi-well pipette, with an ultimate concentration of 10 μM. By meticulously vortexing plates at 500 rpm, media content is homogenized. Before adding 4-hydroxy-tamoxifen (4-OHT), compounds (like ETP-46464) are incubated for 15 minutes at 37ºC. All wells are then treated with 4-OHT and incubated for 60 minutes at 37ºC to trigger ATR activity. Cells are then prepared for IF after being fixed with paraformaldehyde. Each compound (such as ETP-46464) undergoes at least three separate experiments for analysis[1].
Cell Assay
The cells are plated in 96-well plates at 5000 cells per well for KLE, HEC1B, and HELA, and 10,000 cells per well for OVCAR3, A2780, A2780-CP20, and SIHA. The cells are trypsinized with 0.25% Trypsin-EDTA, and they are counted with 0.4% Trypan Blue using an automated cell counter. Following 24-48 hours after seeding, the media is removed and replaced with new media containing either 0.78, 1.56, 3.13, 6.25, 12.5, 25, 50, or 100 µM of Cisplatin or 0.56, 3.13, 6.25, 12.5, 25, 50, or 100 µM of Carboplatin in 0.15% DMSO, 5 µM ETP-46464, 10 µM KU55933, or a combination of 5 µM ETP-46464 and 10 µM KU55933 and incubated for 72 hours. The final ETP-46464 and KU55933 concentrations used are determined by previous data showing inhibition of ATR and ATM signaling, respectively. In a subset of cell lines, single-agent dose response analyses of ETP-46464 and KU55933 showed a broad LD50 range (10.0±8.7 and 38.3±7.6 µM, respectively). In a similar manner, new media containing ciprofloxacin (0, 0.78, 1.56, 3.13, 6.25, 12.5, 25 or 50 µM) in 0.08% DMSO and 5 µM VE-821 are applied to the cells. The MTS CellTiter 96 Aqueous One Solution Cell Proliferation Assay is used to determine the viability of cells. A microplate spectrophotometer is used to measure absorbance at 490 nm following a 2-hour incubation period at 37°C. For every cell line, three biological replicates are carried out, and each experiment's inhibitor(s) and/or ciplatin concentration is measured in triplicate[2].
Animal Protocol
N/A
References

[1]. A cell-based screen identifies ATR inhibitors with synthetic lethal properties for cancer-associated mutations. Nat Struct Mol Biol. 2011 Jun;18(6):721-7.

[2]. Pharmacologic inhibition of ATR and ATM offers clinically important distinctions to enhancing platinum or radiation response in ovarian, endometrial, and cervical cancer cells. Gynecol Oncol. 2015 Mar;136(3):554-61.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C30H22N4O2
Molecular Weight
470.52
Exact Mass
470.17
Elemental Analysis
C, 76.58; H, 4.71; N, 11.91; O, 6.80
CAS #
1345675-02-6
Related CAS #
1345675-02-6
Appearance
Solid powder
SMILES
CC(C)(C#N)C1=CC=C(C=C1)N2C3=C4C=C(C=CC4=NC=C3COC2=O)C5=CC6=CC=CC=C6N=C5
InChi Key
DPLMXAYKJZOTKO-UHFFFAOYSA-N
InChi Code
InChI=1S/C30H22N4O2/c1-30(2,18-31)23-8-10-24(11-9-23)34-28-22(17-36-29(34)35)16-33-27-12-7-19(14-25(27)28)21-13-20-5-3-4-6-26(20)32-15-21/h3-16H,17H2,1-2H3
Chemical Name
2-methyl-2-[4-(2-oxo-9-quinolin-3-yl-4H-[1,3]oxazino[5,4-c]quinolin-1-yl)phenyl]propanenitrile
Synonyms
ETP46464;ETP 46464;ETP-46464; ATM Inhibitor III; ATR Inhibitor III
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)

DMSO: 5~6 mg/mL (10.6~12.8 mM)


Water: <1 mg/mL
Ethanol: <1 mg/mL
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 0.5 mg/mL (1.06 mM) (saturation unknown) in 10% DMSO + 40% PEG300 +5% Tween-80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 5.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 + to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.1253 mL 10.6265 mL 21.2531 mL
5 mM 0.4251 mL 2.1253 mL 4.2506 mL
10 mM 0.2125 mL 1.0627 mL 2.1253 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
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Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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