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DP-b-99

Alias: DP-BAPTA-99; DP-b-99; DP-b 99
Cat No.:V20215 Purity: ≥98%
DP-b99 is a zinc and calcium ion chelator that selectively acts within cell membranes and has neuro-protective (neuro-protection) properties in animal models of stroke.
DP-b-99
DP-b-99 Chemical Structure CAS No.: 222315-88-0
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
DP-b99 is a zinc and calcium ion chelator that selectively acts within cell membranes and has neuro-protective (neuro-protection) properties in animal models of stroke.
DP-b99 is a chelator of zinc and calcium ions that acts selectively within cell membranes. It has neuroprotective properties in animal models of stroke. DP-b99 is a membrane-activated chelator designed to sequester excess zinc and calcium ions only when it partitions into cell membranes. This selective mechanism of action reduces the risk of systemic ion depletion. It has been investigated as a potential treatment for acute ischemic stroke.
Biological Activity I Assay Protocols (From Reference)
Targets
DP-b99 chelates zinc and calcium ions selectively within cell membranes. Its unique mechanism involves partitioning into membranes where its chelating activity is activated, allowing it to buffer excessive intracellular calcium and zinc that contribute to excitotoxic neuronal death. By reducing calcium overload and zinc toxicity, it protects neurons from ischemic damage without affecting normal physiological ion homeostasis.
ln Vitro
In vitro, DP-b99 protects cultured neurons from excitotoxic injury induced by glutamate, NMDA, or zinc. It reduces calcium-induced mitochondrial dysfunction and prevents zinc-mediated neuronal death. Its membrane-selective chelation mechanism has been characterized in liposome and cell-based assays. Neuroprotection is assessed by MTT assay, LDH release, and caspase-3 activity.
ln Vivo
In vivo, DP-b99 demonstrates neuroprotective efficacy in animal models of stroke. In rodent models of transient or permanent middle cerebral artery occlusion, it reduces infarct volume and improves neurological outcomes. It also shows neuroprotective effects in models of traumatic brain injury and acute pancreatitis. The compound crosses the blood-brain barrier and reaches therapeutic concentrations in brain tissue.
Enzyme Assay
Ion chelation assays use fluorescent indicators such as Fura-2 for calcium or Newport Green for zinc. DP-b99 is added to liposomes or cell suspensions, and changes in fluorescence are measured to assess ion binding. Membrane partitioning is assessed by fluorescence spectroscopy using membrane probes. Selectivity for calcium and zinc over magnesium and iron is determined.
Cell Assay
Primary cortical or hippocampal neuronal cultures are used. Cells are treated with DP-b99 and exposed to excitotoxic stimuli (glutamate, NMDA, or zinc). Neuronal viability is measured by MTT assay, LDH release, or propidium iodide staining. Mitochondrial membrane potential is assessed using JC-1. Calcium and zinc levels are measured using fluorescent indicators.
Animal Protocol
Rodent stroke models include middle cerebral artery occlusion (MCAO) in rats and mice. DP-b99 is administered intravenously at doses ranging from 0.1-10 mg/kg before or after occlusion. Infarct volume is measured by TTC staining. Neurological function is assessed using modified neurological severity scores. Brain edema, blood-brain barrier integrity, and inflammatory markers are also evaluated.
References

[1]. Kalendarev T, Zupkovitz G, Ioffe V. The unusual gradient elution for reversed phase HPLC of a strong chelator as an active drug substance. J Pharm Biomed Anal. 2001;24(5-6):967-975.

[2]. Diener HC, Schneider D, Lampl Y, Bornstein NM, Kozak A, Rosenberg G. DP-b99, a membrane-activated metal ion chelator, as neuroprotective therapy in ischemic stroke. Stroke. 2008;39(6):1774-1778.

Additional Infomation
DP-b99 is a newly developed lipophilic, cell-permeable BAPTA (1,2-bis(2-aminophenoxy)ethane-N,N,N',N'-tetraacetic acid) derivative currently being developed as a neuroprotective agent for the potential treatment of nerve damage associated with stroke, head trauma, and coronary artery bypass grafting.
Pharmaceutical Indications
It has been investigated for the treatment of stroke and traumatic brain injury.
Mechanism of Action
DP-b99 is an exploratory product rationally designed using D-Pharm's proprietary technology—Membrane Active Chelating Agents (MAC). Extensive evidence suggests that the redistribution of metal ions and disruption of metal ion homeostasis are key components of the stroke cell damage cascade. In the initial hours following a stroke, ion disturbances lead to excitatory cell damage; in the following days and weeks, ion disturbances lead to edema, inflammation, and cell death. DP-b99 is a novel neuroprotective method that achieves its effect by selectively modulating the homeostasis of calcium, zinc, copper, and iron near the cell membrane.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C42H64N2O12
Molecular Weight
788.96376
Exact Mass
788.445
CAS #
222315-88-0
PubChem CID
9810955
Appearance
White to light yellow solid powder
Density
1.2±0.1 g/cm3
Boiling Point
864.8±65.0 °C at 760 mmHg
Flash Point
476.8±34.3 °C
Vapour Pressure
0.0±0.3 mmHg at 25°C
Index of Refraction
1.542
LogP
9.4
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
14
Rotatable Bond Count
37
Heavy Atom Count
56
Complexity
969
Defined Atom Stereocenter Count
0
SMILES
O=C(CN(C1=CC=CC=C1OCCOC2=CC=CC=C2N(CC(OCCOCCCCCCCC)=O)CC(O)=O)CC(O)=O)OCCOCCCCCCCC
InChi Key
FTGBVHPWUIHWRH-UHFFFAOYSA-N
InChi Code
InChI=1S/C42H64N2O12/c1-3-5-7-9-11-17-23-51-25-27-55-41(49)33-43(31-39(45)46)35-19-13-15-21-37(35)53-29-30-54-38-22-16-14-20-36(38)44(32-40(47)48)34-42(50)56-28-26-52-24-18-12-10-8-6-4-2/h13-16,19-22H,3-12,17-18,23-34H2,1-2H3,(H,45,46)(H,47,48)
Chemical Name
2-[2-[2-[2-[carboxymethyl-[2-(2-octoxyethoxy)-2-oxoethyl]amino]phenoxy]ethoxy]-N-[2-(2-octoxyethoxy)-2-oxoethyl]anilino]acetic acid
Synonyms
DP-BAPTA-99; DP-b-99; DP-b 99
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~126.75 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (3.17 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (3.17 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), suspension solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (3.17 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.2675 mL 6.3375 mL 12.6749 mL
5 mM 0.2535 mL 1.2675 mL 2.5350 mL
10 mM 0.1267 mL 0.6337 mL 1.2675 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
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Calculation results

Working concentration: mg/mL;

Method for preparing DMSO stock solution: mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation::Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
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