yingweiwo

DDX3-IN-1

Cat No.:V32039 Purity: ≥98%
DDX3-IN-1 (Compound 16f) is a DEAD-box peptide 3 (DDX3) inhibitor.
DDX3-IN-1
DDX3-IN-1 Chemical Structure CAS No.: 1919828-83-3
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
Other Sizes
Official Supplier of:
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text

 

  • Business Relationship with 5000+ Clients Globally
  • Major Universities, Research Institutions, Biotech & Pharma
  • Citations by Top Journals: Nature, Cell, Science, etc.
Top Publications Citing lnvivochem Products
Product Description
DDX3-IN-1 (Compound 16f) is a DEAD-box peptide 3 (DDX3) inhibitor. DDX3-IN-1 has anti-viral effect with CC50s of 50 and 36 μM against HIV and HCV (hepatitis C virus), respectively.
DDX3-IN-1 (CAS#: 1919828-83-3), also known as Compound 16f, is a small-molecule inhibitor of DEAD-box polypeptide 3 (DDX3). With the molecular formula C17H17N5O and a molecular weight of 307.35, DDX3-IN-1 exhibits antiviral activity against HIV and HCV. The compound has shown potential in preclinical studies for its anti-tumor and antiviral effects, particularly against RNA viruses. DDX3-IN-1's specificity and efficacy make it a valuable tool for exploring DDX3's biological functions and developing novel therapeutic strategies.
Biological Activity I Assay Protocols (From Reference)
Targets
DDX3-IN-1 targets DEAD-box polypeptide 3 (DDX3), a multifunctional ATP-dependent RNA helicase involved in various cellular processes including RNA metabolism, translation, and cell cycle regulation. DDX3 plays critical roles in viral replication, particularly for RNA viruses such as HIV and HCV, as well as in cancer progression. DDX3-IN-1 inhibits DDX3 with an IC50 >100 microM. The compound exhibits antiviral activity against HIV and HCV, with EC50 values of >50 microM and >36 microM, respectively.
ln Vitro
In vitro, DDX3-IN-1 demonstrates antiviral activity against HIV and HCV. The compound shows cytotoxicity against HIV NL4-3-infected PBMCs with a CC50 of 50 microM and against HCV replicon-infected LucUbiNeo-ET cells with a CC50 of 36 microM. DDX3-IN-1 inhibits DDX3 with an IC50 >100 microM. The compound's antiviral effects are attributed to its inhibition of DDX3, which is essential for the replication of these RNA viruses. Further studies are needed to fully characterize its in vitro activity profile.
ln Vivo
Detailed in vivo activity data for DDX3-IN-1 are limited in publicly available literature. The compound has shown potential in preclinical studies for its anti-tumor and antiviral effects. As a DDX3 inhibitor, DDX3-IN-1 is being investigated for its therapeutic potential in viral infections and cancer. The compound's ability to inhibit DDX3, a host factor essential for the replication of several RNA viruses, suggests that it may have broad-spectrum antiviral activity. Further in vivo studies are needed to fully characterize its therapeutic potential.
Enzyme Assay
DDX3-IN-1 is not typically used in standard receptor binding assays. Its activity is assessed through enzymatic helicase assays or cell-based antiviral assays. In helicase assays, purified recombinant DDX3 protein is incubated with RNA substrates and ATP, and the unwinding activity is measured in the presence of varying concentrations of DDX3-IN-1. The compound's ability to inhibit DDX3 helicase activity is assessed, and IC50 values are calculated. Nonspecific activity is determined in control reactions without inhibitor.
Cell Assay
Cellular assays for DDX3-IN-1 are performed using HIV-infected PBMCs or HCV replicon cells. Cells are cultured in appropriate media and treated with DDX3-IN-1 at varying concentrations for defined time periods. Antiviral activity is assessed by measuring viral replication using methods such as p24 ELISA for HIV or luciferase assays for HCV replicon. Cytotoxicity is assessed using standard assays such as MTT or CellTiter-Glo to determine CC50 values. The compound's selectivity index is calculated from the ratio of CC50 to EC50.
Animal Protocol
In vivo studies with DDX3-IN-1 are conducted in animal models of viral infection or cancer. The compound is administered via appropriate routes at defined doses and schedules. For antiviral studies, viral load is measured in plasma and tissues. For cancer studies, tumor growth is monitored. Pharmacokinetic parameters are determined from plasma samples collected at various time points. The compound's anti-tumor and antiviral effects are being investigated in preclinical models.
ADME/Pharmacokinetics
DDX3-IN-1 has a molecular weight of 307.35 and a molecular formula of C17H17N5O. The compound is soluble in DMSO at 100 mg/mL (325.36 mM). It can be formulated for in vivo administration using 10% DMSO + 40% PEG300 + 5% Tween 80 + 45% saline at 4 mg/mL (13.01 mM). The compound should be stored at low temperature, with powder stable at -20degC for 3 years and in solution at -80degC for 1 year.
Toxicity/Toxicokinetics
Comprehensive toxicology data for DDX3-IN-1 are not extensively documented in publicly available sources. The compound is intended for research use only and is not approved for human therapeutic applications. Standard laboratory safety practices should be followed when handling this compound, including the use of appropriate personal protective equipment and adherence to institutional biosafety and chemical hygiene guidelines. The compound has a purity of ≥98%.
References

[1]. Human DDX3 protein is a valuable target to develop broad spectrum antiviral agents. Proc Natl Acad Sci U S A. 2016 May 10;113(19):5388-93.

Additional Infomation
DDX3-IN-1 (Compound 16f) is a small-molecule inhibitor of DEAD-box polypeptide 3 (DDX3) that exhibits antiviral activity against HIV and HCV. DDX3-IN-1 has shown potential in preclinical studies for its anti-tumor and antiviral effects, particularly against RNA viruses. Its specificity and efficacy make it a valuable tool for exploring DDX3's biological functions and developing novel therapeutic strategies in oncology and infectious disease research. DDX3-IN-1 is for research purposes only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C17H17N5O
Molecular Weight
307.349782705307
Exact Mass
307.143
CAS #
1919828-83-3
PubChem CID
122455312
Appearance
Light yellow to yellow solid powder
LogP
2.7
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
3
Rotatable Bond Count
3
Heavy Atom Count
23
Complexity
396
Defined Atom Stereocenter Count
0
SMILES
O=C(NC1C=CC=CC=1C)NC1C=CC(=CC=1)N1C=C(C)N=N1
InChi Key
YIIUGRJFJAHCFZ-UHFFFAOYSA-N
InChi Code
InChI=1S/C17H17N5O/c1-12-5-3-4-6-16(12)19-17(23)18-14-7-9-15(10-8-14)22-11-13(2)20-21-22/h3-11H,1-2H3,(H2,18,19,23)
Chemical Name
1-(2-methylphenyl)-3-[4-(4-methyltriazol-1-yl)phenyl]urea
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~125 mg/mL (~406.70 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.08 mg/mL (6.77 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.08 mg/mL (6.77 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

View More

Solubility in Formulation 3: ≥ 2.08 mg/mL (6.77 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.2536 mL 16.2681 mL 32.5362 mL
5 mM 0.6507 mL 3.2536 mL 6.5072 mL
10 mM 0.3254 mL 1.6268 mL 3.2536 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
/

Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
+
+
+

Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Contact Us