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DC_517

Alias: DC517; DC 517; DC_517
Cat No.:V19262 Purity: ≥98%
DC_517 is a DNMT1 inhibitor (antagonist) with IC50 and Kds of 1.7 μM and 0.91 μM, respectively.
DC_517
DC_517 Chemical Structure CAS No.: 500017-70-9
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
100mg
Other Sizes
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Product Description
DC_517 is a DNMT1 inhibitor (antagonist) with IC50 and Kds of 1.7 μM and 0.91 μM, respectively.
DC_517 (CAS#: 500017-70-9) is a small-molecule, selective, non-nucleoside inhibitor of DNA methyltransferase 1 (DNMT1), an epigenetic enzyme that maintains DNA methylation patterns. It belongs to the carbazole chemical class. By inhibiting DNMT1, DC_517 disrupts methylation-dependent gene silencing, making it a valuable tool for research in epigenetics and oncology. It is available for research use only and is not intended for therapeutic use.
Biological Activity I Assay Protocols (From Reference)
Targets
DC_517 targets DNA methyltransferase 1 (DNMT1). DNMT1 is an epigenetic enzyme responsible for maintaining DNA methylation patterns during cell division, which regulates gene expression. Inhibition of DNMT1 leads to the reactivation of tumor suppressor genes and other epigenetically silenced genes, which can suppress tumor growth.
ln Vitro
DC_517 is a DNMT1 inhibitor with IC50 and Kd values of 1.7 μM and 0.91 μM, respectively. DC_517 (1.25, 2.5, 5 and 10 μM) substantially suppressed the growth of HCT116 (human colon cancer) and Capan-1 (human pancreatic adenocarcinoma cells) after 24, 48, and 72 hours of treatment. DC_517 (0, 0.75, 1.5, and 3 μM) causes apoptosis in HCT116 cells in a dose-dependent manner [1].
In vitro, DC_517 is a potent DNMT1 inhibitor with an IC50 of 1.7 μM and a binding affinity (Kd) of 0.91 μM. It substantially suppresses the growth of HCT116 (human colon cancer) and Capan-1 (human pancreatic adenocarcinoma) cells at concentrations of 1.25, 2.5, 5, and 10 μM after 24, 48, and 72 hours of treatment. It also induces apoptosis in HCT116 cells in a dose-dependent manner at concentrations of 0.75, 1.5, and 3 μM.
ln Vivo
No specific in vivo animal data is publicly available for DC_517. While one source mentions intravenous (i.v.) and oral (p.o.) administration in a pharmacokinetic context, detailed in vivo efficacy or animal model studies have not been reported in the available literature. The compound is primarily characterized in vitro.
Enzyme Assay
In cell-free enzymatic assays, the activity of DC_517 is evaluated by measuring its inhibition of DNMT1 catalytic activity. The assay typically involves incubating purified recombinant DNMT1 enzyme with its substrate (e.g., a DNA oligomer containing a hemimethylated CpG site) and the methyl donor S-adenosylmethionine (SAM) in the presence of varying concentrations of DC_517. The extent of methylation is then quantified, and the IC50 value is calculated from the inhibition curve.
Cell Assay
Cell-based assays for DC_517 typically involve culturing cancer cell lines such as HCT116 (human colon cancer) or Capan-1 (human pancreatic adenocarcinoma). Cells are seeded in multi-well plates and treated with various concentrations of DC_517 (e.g., 1.25, 2.5, 5, and 10 μM) for 24, 48, or 72 hours. Cell proliferation and viability are then assessed using standard assays such as MTT or CellTiter-Glo. Apoptosis induction can be measured by flow cytometry after Annexin V/PI staining.
Animal Protocol
No specific in vivo animal protocols are publicly available for DC_517. The compound's effects have been primarily characterized in vitro. No standard animal models have been reported in the available literature.
ADME/Pharmacokinetics
No detailed pharmacokinetic data is publicly available for DC_517. One source provides preliminary data showing that after i.v. (2 mg/kg) and p.o. (10 mg/kg) administration, the compound exhibited a half-life of 6.7 hours in both routes, with an oral bioavailability of 38.7%. Further comprehensive PK parameters are not reported.
Toxicity/Toxicokinetics
No specific toxicity data is publicly available for DC_517. As a research compound, its safety profile in vivo has not been established. In cell-based assays, it shows antiproliferative and pro-apoptotic effects at micromolar concentrations. The compound is for research use only and is not for human therapeutic use.
References

[1]. Identifying novel selective non-nucleoside DNA methyltransferase 1 inhibitors through docking-based virtual screening. J Med Chem. 2014 Nov 13;57(21):9028-9041.

Additional Infomation
DC_517 belongs to the carbazole class of compounds, with the chemical name 1,3-di(9H-carbazole-9-yl)prop-2-ol, in which the hydroxyl group is replaced by 2-hydroxy-3-[(prop-2-yl)amino]propoxy. It is a DNA methyltransferase 1 inhibitor (IC50 = 1.7 μM). It has multiple functions, including as an EC 2.1.1.37 [DNA (cytosine-5-)-methyltransferase] inhibitor, an apoptosis inducer, and an antitumor drug. It belongs to the carbazole class, ether class, secondary amine class, secondary alcohol class, and tertiary amine class of compounds.
DC_517 is a selective DNMT1 inhibitor with the IUPAC name 1-[1,3-di(carbazol-9-yl)propan-2-yloxy]-3-(propan-2-ylamino)propan-2-ol. Its molecular formula is C33H35N3O2 and its molecular weight is 505.65. It is a member of the carbazoles chemical class. It is used as a research tool to study DNA methylation, gene regulation, and epigenetic therapeutic strategies.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C33H35N3O2
Molecular Weight
505.66
Exact Mass
505.272
Elemental Analysis
C, 78.38; H, 6.98; N, 8.31; O, 6.33
CAS #
500017-70-9
PubChem CID
3713657
Appearance
White to off-white solid powder
Density
1.2±0.1 g/cm3
Boiling Point
727.9±60.0 °C at 760 mmHg
Flash Point
394.0±32.9 °C
Vapour Pressure
0.0±2.5 mmHg at 25°C
Index of Refraction
1.644
LogP
8.26
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
3
Rotatable Bond Count
10
Heavy Atom Count
38
Complexity
654
Defined Atom Stereocenter Count
0
SMILES
CC(C)NCC(COC(CN1C2=CC=CC=C2C3=CC=CC=C31)CN4C5=CC=CC=C5C6=CC=CC=C64)O
InChi Key
BLTONWSCODZCNA-UHFFFAOYSA-N
InChi Code
InChI=1S/C33H35N3O2/c1-23(2)34-19-24(37)22-38-25(20-35-30-15-7-3-11-26(30)27-12-4-8-16-31(27)35)21-36-32-17-9-5-13-28(32)29-14-6-10-18-33(29)36/h3-18,23-25,34,37H,19-22H2,1-2H3
Chemical Name
1-[1,3-di(carbazol-9-yl)propan-2-yloxy]-3-(propan-2-ylamino)propan-2-ol
Synonyms
DC517; DC 517; DC_517
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ≥ 50 mg/mL (~98.88 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 3.25 mg/mL (6.43 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 32.5 mg/mL clear DMSO stock solution to 400 μL of PEG300 and mix evenly; then add 50 μL of Tween-80 to the above solution and mix evenly; then add 450 μL of normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: 3.25 mg/mL (6.43 mM) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), suspension solution; with ultrasonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 32.5 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 3.25 mg/mL (6.43 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 32.5 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.9776 mL 9.8881 mL 19.7761 mL
5 mM 0.3955 mL 1.9776 mL 3.9552 mL
10 mM 0.1978 mL 0.9888 mL 1.9776 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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