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DB1976 HCl

Alias: DB 1976 HCl; DB-1976 HCl
Cat No.:V37818 Purity: ≥98%
DB1976 diHCl, a selenocene analog of DB270, is a potent and cell-penetrating/penetrable inhibitor of the transcription factor PU.
DB1976 HCl
DB1976 HCl Chemical Structure CAS No.: 2369663-93-2
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
Other Sizes

Other Forms of DB1976 HCl:

  • DB1976
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
DB1976 diHCl, a selenocene analog of DB270, is a potent and cell-penetrating/penetrable inhibitor of the transcription factor PU.1. In vitro, DB1976 diHCl potently inhibits PU.1 binding (IC50 of 10 nM) and strongly inhibits the PU.1/DNA complex (with high DB1976-λB affinity, KD of 12 nM). DB1976 diHCl causes apoptosis.
Biological Activity I Assay Protocols (From Reference)
ln Vitro
DB1976 is a traditional heterocyclic dilabel, or single heteroatom, that exhibits high selectivity and affinity for AT-rich sequences that are frequently present in PU.1's homologous DNA binding site. When applied to PU.1-negative HEK293 cells, DB1976 has an IC50 value of 2.4 μM and suppresses PU.1-dependent reporter gene transactivation in a dose-dependent manner [3]. Treatment with DB1976 significantly inhibited the development of PU.1 URE–/– AML cells (IC50 of 105 μM), but had no effect on normal hematopoietic cells (IC50 of 334 μM) at identical dosages [3]. In mouse PU.1 URE–/– AML cells, DB1976 administration led to a 1.6-fold increase in apoptotic cells; same effects were noted in human MOLM13 cells [3]. When compared to cells treated with a vehicle, DB1976 treatment significantly decreased the number of viable cells (primary human AML cells) (mean reduction of 81%) and the clonogenic capability (mean reduction of 36%). The apoptotic cell fraction is increased by DB1976 by an average of 1.5 times [3].
References
[1]. Munde M, et al. Structure-dependent inhibition of the ETS-family transcription factor PU.1 by novel heterocyclic diamidines. Nucleic Acids Res. 2014 Jan;42(2):1379-90.
[2]. Stephens DC, et al. Pharmacologic efficacy of PU.1 inhibition by heterocyclic dications: a mechanistic analysis. Nucleic Acids Res. 2016 May 19;44(9):4005-13.
[3]. Antony-Debré I, et al. Pharmacological inhibition of the transcription factor PU.1 in leukemia. J Clin Invest. 2017 Dec 1;127(12):4297-4313.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C20H18CL2N8SE
Molecular Weight
520.276519298553
Exact Mass
520.019
CAS #
2369663-93-2
Related CAS #
DB1976;1557397-51-9
PubChem CID
146014497
Appearance
Typically exists as solid at room temperature
Hydrogen Bond Donor Count
8
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
4
Heavy Atom Count
31
Complexity
604
Defined Atom Stereocenter Count
0
InChi Key
ZXDJCXGSFWTRMS-UHFFFAOYSA-N
InChi Code
InChI=1S/C20H16N8Se.2ClH/c21-17(22)9-1-3-11-13(7-9)27-19(25-11)15-5-6-16(29-15)20-26-12-4-2-10(18(23)24)8-14(12)28-20;;/h1-8H,(H3,21,22)(H3,23,24)(H,25,27)(H,26,28);2*1H
Chemical Name
2-[5-(6-carbamimidoyl-1H-benzimidazol-2-yl)selenophen-2-yl]-3H-benzimidazole-5-carboximidamide;dihydrochloride
Synonyms
DB 1976 HCl; DB-1976 HCl
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~62.5 mg/mL (~120.13 mM)
H2O : ~18.33 mg/mL (~35.23 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.08 mg/mL (4.00 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.08 mg/mL (4.00 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.9220 mL 9.6102 mL 19.2204 mL
5 mM 0.3844 mL 1.9220 mL 3.8441 mL
10 mM 0.1922 mL 0.9610 mL 1.9220 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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