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D-609

Alias: D609D-609 D609
Cat No.:V7867 Purity: ≥98%
D-609 (D609) is a novel, competitiveand potent phospholipase C inhibitor with the potential to be used for the treatment of pancreatic cancer.
D-609
D-609 Chemical Structure CAS No.: 83373-60-8
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
50mg
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Product Description

D-609 (D609) is a novel, competitive and potent phospholipase C inhibitor with the potential to be used for the treatment of pancreatic cancer. It inhibits phosphatidyl choline-specific phospholipase C (PC-PLC) with Ki of 6.4 μM.

Biological Activity I Assay Protocols (From Reference)
ln Vitro
D609 at 100 μM for two hours greatly reduces edema in several cell lines [2]. After activating caspase-3 at 200 μM for two hours, D609 (100 μM; two hours) at 50, 100 μM significantly inhibited BrdU in BV-2 astrocytes. It occurs annually and results in a decrease in the number of cells in the S phase and an accumulation of cells in the G1 phase [2]. 100 μM; for two hours, then for two more hours or for twenty-two hours without D609) raises ceramide levels, boosts p21 expression, and causes phosphorylated Rb to drop [2].
ln Vivo
In apoE-/-mice, D609 (2.5, 10 mg/kg/day; i.p.; for 6 weeks) inhibits the progression of preexisting atherosclerotic lesions, changing the event component to a more stable phenotype [3 LPS administered intratracheally (30 mg/kg; i.p.; single dose) 30 minutes prior to LPS (3 mg/kg) prevents LPS-induced pulmonary hypertension in Island Wistar [4]. C57BL/6 WT and apoE−/− 26-week-old mice [3]
Cell Assay
Cell Proliferation Assay[2]
Cell Types: RAW 264.7 macrophages, N9 and BV-2 microglia, and DITNC1 astrocytes
Tested Concentrations: 100 μM
Incubation Duration: 2 hrs (hours)
Experimental Results: Dramatically attenuated RAW 264.7 macrophages , N9 and BV-2 microglia, and DITNC1 astrocytes without affecting cell viability.

Apoptosis analysis[2]
Cell Types: BV-2 Cell
Tested Concentrations: 50, 100 and 200 μM
Incubation Duration: 2 hrs (hours)
Experimental Results: Activation of caspase-3 in a dose- and time-dependent manner.

Cell cycle analysis [2]
Cell Types: BV-2 Cell
Tested Concentrations: 100 μM
Incubation Duration: 2 hrs (hours)
Experimental Results: Dramatically inhibited the incorporation of BrdU in BV-2 microglia, resulting in G1 phase cell aggregation and S phase cell number reduction phase.

Western Blot Analysis[2]
Cell Types: BV-2 Cell
Tested Concentrations: 100 μM
Incubation Duration: 2 hrs (hours)
Experimental Results: Increased ceramide levels, upregulation of p21 expression and resulting reduction in phospho-Rb.
Animal Protocol
Animal/Disease Models: 26weeks old apoE−/− and C57BL/6 WT mice[3]
Doses: 2.5, 10 mg/kg
Route of Administration: IP; per day for 6 weeks
Experimental Results:Inhibited the progression of preexisting atherosclerotic lesions in apoE−/− mice and changed the lesion composition into a more stable phenotype. Dramatically diminished the aortic endothelial expression of the vascular cell adhesion molecule-1 and the intercellular adhesion molecule-1.
References

[1]. The antiviral, antitumoural xanthate D609 is a competitive inhibitor of phosphatidylcholine-specific phospholipase C. Drugs Exp Clin Res. 1996;22(6):287-94.

[2]. Anti-proliferative effects of tricyclodecan-9-yl-xanthogenate (D609) involve ceramide and cell cycle inhibition.Mol Neurobiol. 2012 Jun;45(3):455-64. Epub 2012 Mar 14.

[3]. D609 inhibits progression of preexisting atheroma and promotes lesion stability in apolipoprotein e-/- mice: a role of phosphatidylcholine-specific phospholipase in atherosclerosis. Arterioscler Thromb Vasc Biol. 2010 Mar;30(3):411-8.

[4]. Role of acid sphingomyelinase and IL-6 as mediators of endotoxin-induced pulmonary vascular dysfunction. Thorax. 2017 May;72(5):460-471.

[5]. D609 inhibits the proliferation of neural progenitor cells.Neuroreport. 2010 Jul 14;21(10):700-3.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C11H15KOS2
Molecular Weight
266.4583
Exact Mass
266.02
CAS #
83373-60-8
Related CAS #
83373-60-8 (K+); 145764-52-9 (free);
PubChem CID
4234241
Appearance
White to off-white solid powder
Density
1.24 g/cm3
Boiling Point
303.8ºC at 760 mmHg
Flash Point
137.5ºC
LogP
3.31
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
3
Rotatable Bond Count
2
Heavy Atom Count
15
Complexity
271
Defined Atom Stereocenter Count
0
SMILES
[K].S=C(OC1C2C3C(C(C2)C1)CCC3)S
InChi Key
IGULCCCBGBDZKQ-UHFFFAOYSA-M
InChi Code
InChI=1S/C11H16OS2.K/c13-11(14)12-10-5-6-4-9(10)8-3-1-2-7(6)8;/h6-10H,1-5H2,(H,13,14);/q;+1/p-1
Chemical Name
potassium;8-tricyclo[5.2.1.02,6]decanyloxymethanedithioate
Synonyms
D609D-609 D609
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~375.29 mM)
H2O : ~2 mg/mL (~7.51 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 3 mg/mL (11.26 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 30.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 3 mg/mL (11.26 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 30.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 3 mg/mL (11.26 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 30.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


Solubility in Formulation 4: 25 mg/mL (93.82 mM) in PBS (add these co-solvents sequentially from left to right, and one by one), clear solution; with ultrasonication (<60°C).

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.7529 mL 18.7645 mL 37.5291 mL
5 mM 0.7506 mL 3.7529 mL 7.5058 mL
10 mM 0.3753 mL 1.8765 mL 3.7529 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
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  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
NCT Number Recruitment interventions Conditions Sponsor/Collaborators Start Date Phases
NCT00669734 ACTIVE, NOT RECRUITING Biological: Falimarev
Biological: Inalimarev
Other: Laboratory Biomarker Analysis
Biological: Sargramostim
Locally Advanced Pancreatic
Adenocarcinoma
Pancreatic Acinar Cell Carcinoma
Pancreatic Ductal Adenocarcinoma
Stage III Pancreatic Cancer AJCC v6 and v7
Stage IV Pancreatic Cancer AJCC v6 and v7
National Cancer Institute (NCI) 2010-02-01 Phase 1
Biological Data
  • D609 inhibited proliferation of (A) BV-2 microglia, (B) N9 microglia, (C) RAW 264.7 macrophages and (D) DITNC1 astrocytes. Cell lines were first plated and allowed to adhere overnight. At the start of treatment, parallel dishes of cells were harvested and counted to determine the initial cell number. Cells were treated with 100 μM D609 for 2 h, followed by a media change. The media was centrifuged to recover any non-adherent cells, which were returned to the respective dishes. Cells were counted using a hemocytometer and viability was determined by trypan blue exclusion following 22 h incubation without D609. Viability was greater than 90% in all cells. * p < 0.05 and ** p < 0.01 compared with controls by unpaired t-test (n=3/group).[1].Gusain A, et al. Anti-proliferative effects of tricyclodecan-9-yl-xanthogenate (D609) involve ceramide and cell cycle inhibition.Mol Neurobiol. 2012 Jun;45(3):455-64. Epub 2012 Mar 14.
  • D609 inhibited BrdU incorporation in BV-2 cells. (A): BrdU uptake in BV-2 controls and cells treated with D609. Cells were plated in 96-well plates and allowed to attach overnight, then treated with 100 μM D609 for 2 h. The media was then replaced with fresh media containing BrdU and cells were incubated for 2 h. Cells were labeled with anti-BrdU antibody followed by DAPI counterstaining, and imaged. Blue: DAPI, green: BrdU. Original magnification 200x. (B): Quantification of BrdU-positive cells as a percentage of total cells. *** p < 0.001 compared with controls by unpaired t-test.[1].Gusain A, et al. Anti-proliferative effects of tricyclodecan-9-yl-xanthogenate (D609) involve ceramide and cell cycle inhibition.Mol Neurobiol. 2012 Jun;45(3):455-64. Epub 2012 Mar 14.
  • Effect of D609 treatment on cell cycle progression in BV-2 cells. (A): Representative DNA histogram from control and D609 treatment groups. BV-2 cells were treated with 100 μM D609 for 2 h followed by 2 h in media without D609, then stained with propidium iodide. DNA content of the samples were analyzed by flow cytometry. (B): Quantification of the percentage of cells in each phase of cell cycle. 2 h D609 followed by 2 h in the media without D609 has arrested the cells in the G1 phase with a smaller percentage of cells entering into the S phase. * p < 0.05 compared with controls by unpaired t-test; from 3 independent experiments.[1].Gusain A, et al. Anti-proliferative effects of tricyclodecan-9-yl-xanthogenate (D609) involve ceramide and cell cycle inhibition.Mol Neurobiol. 2012 Jun;45(3):455-64. Epub 2012 Mar 14.
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