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Cy7 DiC18

Cat No.:V34186 Purity: ≥98%
DiR is a long-chain carbocyanine dye.
Cy7 DiC18
Cy7 DiC18 Chemical Structure CAS No.: 100068-60-8
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
Other Sizes
Official Supplier of:
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Product Description
DiR is a long-chain carbocyanine dye. Carbocyanine dyes are extensively used as lipophilic tracers for labeling cells, organelles, liposomes, viruses, and lipoproteins.
Biological Activity I Assay Protocols (From Reference)
ln Vitro
Labeling cells, organelles, toners, viruses, and lipoproteins with henna dyes is a common practice. The dialkylphoenix dye DiA (4-Di-16-ASP), which is used to designate membranes and other focal structures, is one of the long-chain henna cyanines, along with DiO (DiOC18 (3)), DiI (DiIC18 (3)), DiD (DiIC18 (5)), and DiR. Comparing DiIC16 (3) to DiI (C18), the alkyl substituent (C16) is shorter. They exhibit brief excited-state depletion in pyramid settings, environment-dependent fluorophores, and extraordinarily high extinction factors. While they are oil-forming and have poor fluorescence in water, when they are attached to lipophilic biomolecules or integrated into membranes, they become moderately photostable and highly fluorescent. Their optical characteristics render them perfect for the staining of cell plasma membranes. These dyes diffuse laterally within the plasma membrane after cells are identified, staining the entire cell [1 DiO, DiI, DiD, and DiR exhibit distinct green, orange, red, and red fluorescence, respectively, making it easier to image live cells in multiple colors and perform flow cytometry analysis. You can utilize normal FITC and TRITC filters with DiO and DiI, respectively. Because they often show extremely low cytotoxicity, DiI and its analogs are the most widely employed among them. Furthermore, lipoproteins like LDL and HDL are frequently measured using DiI. Another often used tool for determination is the lipophilic radical dye DiA. Protocol general 1. Get Di staining solution ready. The Metatracer [2]. Compile stock solutions in dimethylformamide (DMF), dimethylformamide (DMSO), or ethanol DMSO. The concentration of the stock solutions should range from 1 to 5 mM. To act as Di's solvent, DMF b. Aliquot the stock solution and store it in the freezer at a minimum of -20°C. An aliquot of any leftover solution is advised. Don't freeze and thaw again. The solution has a six-month shelf life. B. To create a working solution, mix the stock solution with a suitable buffer, like serum-free medium, HBSS, or PBS, ranging from 1 to 5 μM. Storing the sink for longer than a day is not advised. Note: Two is the working solution's final concentration. Cells suspended a. For three to five minutes, centrifuge at 1000 g at 4°C. Once the Di working solution has been added, wait one to thirty minutes. D. Rinse twice with PBS for five minutes each time, then centrifuge three to four times at 400 g and 4°C. Discard the supernatant. D. Wash for five minutes each time, twice, using PBS. E. After resuspending the cells in PBS or serum-free cells, examine them using a microscope or flow cytometry. 3. cells that adhere a. B. After removing the coverslip from the culture medium, aspirate any extra cells. an. Once the cells are well covered, add 100 μL of the working solution, shake gently, and let the cells purify for five to thirty minutes. Apply culture medium twice, allowing each wash to last five minutes. Observe using flow cytometry or fluorescence microscopy.
References

[1]. Multicolor "DiOlistic" labeling of the nervous system using lipophilic dye combinations. Neuron. 2000 Aug;27(2):219-25.

[2]. Applied electric fields accelerate the diffusion rate and increase the diffusion distance of DiI in fixed tissue. J Neurosci Methods. 2005 Jan 30;141(1):155-63.

Additional Infomation
DiIC18(7) dye is an organic iodide salt. It has a role as a fluorochrome. It contains a diIC18(7)(1+). It is functionally related to a C7-indocyanine.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C63H101IN2
Molecular Weight
1013.3939
Exact Mass
1012.7
CAS #
100068-60-8
PubChem CID
25195411
Appearance
Brown to reddish brown solid powder
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
2
Rotatable Bond Count
38
Heavy Atom Count
66
Complexity
1260
Defined Atom Stereocenter Count
0
SMILES
CCCCCCCCCCCCCCCCCCN\1C2=CC=CC=C2C(/C1=C\C=C\C=C\C=C\C3=[N+](C4=CC=CC=C4C3(C)C)CCCCCCCCCCCCCCCCCC)(C)C.[I-]
InChi Key
JLIOTPLALDYAEH-UHFFFAOYSA-M
InChi Code
InChI=1S/C63H101N2.HI/c1-7-9-11-13-15-17-19-21-23-25-27-29-31-33-38-46-54-64-58-50-44-42-48-56(58)62(3,4)60(64)52-40-36-35-37-41-53-61-63(5,6)57-49-43-45-51-59(57)65(61)55-47-39-34-32-30-28-26-24-22-20-18-16-14-12-10-8-2;/h35-37,40-45,48-53H,7-34,38-39,46-47,54-55H2,1-6H3;1H/q+1;/p-1
Chemical Name
(2E)-2-[(2E,4E,6E)-7-(3,3-dimethyl-1-octadecylindol-1-ium-2-yl)hepta-2,4,6-trienylidene]-3,3-dimethyl-1-octadecylindole;iodide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture and light.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~25 mg/mL (~24.67 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.08 mg/mL (2.05 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 0.9868 mL 4.9339 mL 9.8679 mL
5 mM 0.1974 mL 0.9868 mL 1.9736 mL
10 mM 0.0987 mL 0.4934 mL 0.9868 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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