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Ciliobrevin A(HPI-4)

Alias: Ciliobrevin A HPI-4 HPI 4 HPI4. Hedgehog Pathway Inhibitor 4.
Cat No.:V18330 Purity: ≥98%
Ciliobrevin A, formerly known as HPI-4 and Hedgehog Pathway Inhibitor 4, is a Hedgehog pathway inhibitor.
Ciliobrevin A(HPI-4)
Ciliobrevin A(HPI-4) Chemical Structure CAS No.: 302803-72-1
Product category: Hedgehog(Smoothened) ROCK
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description
Ciliobrevin A, formerly known as HPI-4 and Hedgehog Pathway Inhibitor 4, is a Hedgehog pathway inhibitor. Treatment with HH pathway inhibitor-4 (HPI-4) could significantly decrease human chondrosarcoma cell proliferation, invasion and migration ability. Furthermore, HPI-4 could distinctly disturb HH pathway-mediated ciliogenesis and suppress primary cilia-related protein intraflagellar transport protein IFT88 expression. HH downstream effect molecular GLI2 was restrained to block parathyroid hormone-related protein and affect MAPK/ERK-regulated matrix metalloproteinases (MMP2 and MMP9). d HPI-4 could be a new therapeutic option specific to chondrosarcoma expressing elevated levels of HH pathway.
Ciliobrevin A (HPI-4; Hedgehog Pathway Inhibitor 4) is a small-molecule inhibitor that blocks Sonic hedgehog (Shh)-induced Hedgehog (Hh) pathway activation. It acts downstream of Smoothened (Smo) with an IC50 of 7 μM. Ciliobrevin A is also a potent and selective inhibitor of dynein ATPase. It is a ciliogenesis inhibitor. Its molecular formula is C17H9Cl2N3O2 and its molecular weight is 358.18.
Biological Activity I Assay Protocols (From Reference)
Targets
Ciliobrevin A targets the Hedgehog signaling pathway, acting downstream of Smoothened (Smo). It also targets the AAA+ ATPase motor protein cytoplasmic dynein, inhibiting its ATPase activity. By inhibiting dynein, it disrupts microtubule-based processes. Its mechanism involves the modulation of Gli processing, activation, or trafficking.
ln Vitro
While HPI-2 and HPI-3 exhibited no discernible effect, ciliobrevin A (HPI-4) likewise stopped the rise in the FLAG-Gli2 full-length/repressor protein ratio following Shh stimulation. While HPI-2 or HPI-3 had no discernible influence on FLAG-Gli1 levels, Ciliobrevin A decreased the stability of FLAG-Gli1 in these cells, exposing a different mechanism by which this small chemical inhibits Hh target gene production. The effect of ciliobrevin A on ciliary FLAG-Gli2 levels is greater than that of the compound on total FLAG-Gli2 levels. Additionally, primary cilia in Shh-EGFPFLAG-Gli2 cells cultivated with Ciliobrevin A were shortened, and in the majority of Ciliobrevin A-treated cells, this organelle was gone. Additionally, in Shh-LIGHT2FLAG-Gli1 cells, ciliobrevin A interferes with the development of primary cilia and encourages FLAG-Gli1 accumulation at the distal end of this organelle. As shown by histone H3 phosphorylation (pH3), cleiobrevin A markedly suppressed the proliferation of these neural progenitor cells. It also decreased the amounts of cyclin D1 protein, Gli1, Gli2, and N-Myc transcripts in CGNPs. While Cyclopamine, a Smo inhibitor, is ineffective against any oncogenic lesions, Ciliobrevin A effectively inhibits the proliferation of SmoM2-expressing CGNPs and is also effective against CGNPs lacking Su(fu) function [1].
In vitro, Ciliobrevin A significantly inhibits the proliferation of neuronal progenitors, as measured by histone H3 phosphorylation levels. It reduces cellular levels of cyclin D1 protein and Gli1, Gli2, and N-Myc transcripts in Cerebellar Granule Neuron Precursors. Treatment with HPI-4 significantly decreases human chondrosarcoma cell proliferation, invasion, and migration ability.
ln Vivo
In vivo, Ciliobrevin A has been studied for its effects on Hedgehog signaling and dynein function. As an inhibitor of the Hedgehog pathway, it has potential anticancer activity. It is used as a research tool to study the role of Hedgehog signaling and dynein in various biological processes.
Enzyme Assay
In vitro assays for Ciliobrevin A typically measure its inhibition of Hedgehog pathway activation. Reporter gene assays using Gli-responsive luciferase constructs are used. Cells are treated with Shh and the compound, and luciferase activity is measured. IC50 values are calculated. Dynein ATPase activity is assessed using ATPase assays.
Cell Assay
Cellular assays for Ciliobrevin A are performed using neuronal progenitors or cancer cell lines. Cells are treated with the compound, and proliferation is assessed by measuring histone H3 phosphorylation or by using proliferation assays. Gli1, Gli2, and N-Myc expression is measured by qRT-PCR. Cell migration and invasion are assessed using transwell assays.
Animal Protocol
In vivo animal studies with Ciliobrevin A are conducted in models of Hedgehog-dependent cancers. The compound is administered to tumor-bearing animals. Tumor growth and Hedgehog pathway activity are assessed. Its efficacy in inhibiting tumor growth is evaluated.
ADME/Pharmacokinetics
Pharmacokinetic data for Ciliobrevin A are limited. Its molecular weight is 358.18 g/mol. The compound is cell-permeable. For research use, it is typically dissolved in DMSO for in vitro studies. Its oral bioavailability and metabolic stability have not been extensively characterized.
Toxicity/Toxicokinetics
Comprehensive toxicological data for Ciliobrevin A are limited. In cell-based assays, the compound shows activity at micromolar concentrations. No significant toxicity has been reported at the doses used for Hedgehog inhibition studies. The compound is intended for laboratory research only and should be handled with standard safety precautions.
References

[1]. Small-molecule inhibitors reveal multiple strategies for Hedgehog pathway blockade. Proc Natl Acad Sci U S A. 2009 Aug 18;106(33):14132-7.

Additional Infomation
Ciliobrevin A is a research compound used as an inhibitor of the Hedgehog signaling pathway and cytoplasmic dynein. It is a valuable tool for studying the role of Hedgehog signaling in development and cancer. The compound is not approved for clinical use and is intended for laboratory research only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C17H9CL2N3O2
Molecular Weight
358.178
Exact Mass
357.007
CAS #
302803-72-1
Related CAS #
302803-72-1;
PubChem CID
135535957
Appearance
Light yellow to yellow solid powder
LogP
3.001
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
2
Heavy Atom Count
24
Complexity
637
Defined Atom Stereocenter Count
0
SMILES
C1=CC=C2C(=C1)C(=O)NC(=N2)/C(=C(/C3=C(C=C(C=C3)Cl)Cl)\O)/C#N
InChi Key
UEZZGQDPOFILFH-QINSGFPZSA-N
InChi Code
InChI=1S/C17H9Cl2N3O2/c18-9-5-6-10(13(19)7-9)15(23)12(8-20)16-21-14-4-2-1-3-11(14)17(24)22-16/h1-7,21H,(H,22,24)/b16-12+
Chemical Name
(E)-3-(2,4-dichlorophenyl)-3-oxo-2-(4-oxo-3,4-dihydroquinazolin-2(1H)-ylidene)propanenitrile
Synonyms
Ciliobrevin A HPI-4 HPI 4 HPI4. Hedgehog Pathway Inhibitor 4.
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~279.19 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (6.98 mM) (saturation unknown) in 10% DMSO + 40% PEG300 +5% Tween-80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 + to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.7919 mL 13.9595 mL 27.9189 mL
5 mM 0.5584 mL 2.7919 mL 5.5838 mL
10 mM 0.2792 mL 1.3959 mL 2.7919 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
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