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CHD1Li 6.11

Cat No.:V50683 Purity: ≥98%
CHD1Li 6.11 is a potent inhibitor of oncogenic CHD1L (IC50=3.3 µM for cat-CHD1L recombinant protein).
CHD1Li 6.11
CHD1Li 6.11 Chemical Structure CAS No.: 2716890-91-2
Product category: New3
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
CHD1Li 6.11 is a potent inhibitor of oncogenic CHD1L (IC50=3.3 µM for cat-CHD1L recombinant protein). CHD1Li 6.11 is an orally bioavailable anticancer agent that significantly reduces tumor volume in CRC xenografts generated from isolated quasi-mesenchymal cells (M phenotype) that possess enhanced tumorigenic properties.
CHD1Li 6.11 (OTI-611) is a potent inhibitor of oncogenic CHD1L (chromodomain helicase DNA binding protein 1 like). It inhibits cat-CHD1L recombinant protein with an IC₅₀ of 3.3 μM. It is an orally bioavailable antitumor agent. It significantly reduces tumor volume of CRC xenografts generated from isolated quasi-mesenchymal cells (M phenotype) that possess enhanced tumorigenic properties. The CAS number is 2716890-91-2, with a molecular formula of C₂₁H₂₂BrN₅OS.
Biological Activity I Assay Protocols (From Reference)
Targets
CHD1Li 6.11 targets CHD1L (chromodomain helicase DNA binding protein 1 like), an oncogenic protein involved in chromatin remodeling. CHD1L is a target in prostate cancer research, where CHD1 loss or dysregulation plays a critical role in tumorigenesis and therapy resistance. Inhibition of CHD1L disrupts chromatin dynamics and epigenetic regulation.
ln Vitro
In vitro, CHD1Li 6.11 is a potent inhibitor of oncogenic CHD1L with an IC₅₀ of 3.3 μM for cat-CHD1L recombinant protein. It is an orally bioavailable antitumor agent. It is used to study epigenetic regulation, chromatin dynamics, and potential vulnerabilities in cancers dependent on chromatin remodeling pathways.
ln Vivo
In vivo, CHD1Li 6.11 significantly reduces tumor volume of CRC xenografts generated from isolated quasi-mesenchymal cells (M phenotype) that possess enhanced tumorigenic properties. It is an orally bioavailable anticancer agent. It has potential for prostate cancer research.
Enzyme Assay
The in vitro enzyme inhibition assay for CHD1Li 6.11 involves measuring the activity of cat-CHD1L recombinant protein in the presence of the compound. The IC₅₀ of 3.3 μM is determined by quantifying the reduction in CHD1L enzymatic activity.
Cell Assay
In vitro cell-based assays for CHD1Li 6.11 involve treating cancer cells with the compound and assessing cell viability, proliferation, and chromatin remodeling. The compound's effects on gene expression and epigenetic regulation are evaluated.
Animal Protocol
In vivo animal studies for CHD1Li 6.11 involve xenograft mouse models of colorectal cancer (CRC). Tumor-bearing mice are treated orally with the compound, and tumor growth inhibition is monitored.
ADME/Pharmacokinetics
Pharmacokinetic properties of CHD1Li 6.11 are not extensively detailed in the available literature. The compound is orally bioavailable.
Toxicity/Toxicokinetics
No specific toxicity data for CHD1Li 6.11 are available in the provided literature. The compound is for research use only. Standard laboratory safety precautions should be followed when handling.
References

[1]. Design, Synthesis, and Biological Evaluation of the First Inhibitors of Oncogenic CHD1L. J Med Chem. 2022;65(5):3943-3961.

Additional Infomation
CHD1Li 6.11 is a potent CHD1L inhibitor with an IC₅₀ of 3.3 μM. It is an orally bioavailable antitumor agent. It reduces tumor volume in CRC xenografts. Its CAS number is 2716890-91-2.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C21H22BRN5OS
Molecular Weight
472.40
Exact Mass
471.073
CAS #
2716890-91-2
PubChem CID
156868176
Appearance
Off-white to gray to be determined
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
6
Rotatable Bond Count
6
Heavy Atom Count
29
Complexity
541
Defined Atom Stereocenter Count
0
SMILES
CC1=CC(=NC(=N1)N2CCCC2)NC3=CC=C(C=C3)NC(=O)CC4=CC(=CS4)Br
InChi Key
ACDZBXZERLBYOW-UHFFFAOYSA-N
InChi Code
InChI=1S/C21H22BrN5OS/c1-14-10-19(26-21(23-14)27-8-2-3-9-27)24-16-4-6-17(7-5-16)25-20(28)12-18-11-15(22)13-29-18/h4-7,10-11,13H,2-3,8-9,12H2,1H3,(H,25,28)(H,23,24,26)
Chemical Name
2-(4-bromothiophen-2-yl)-N-[4-[(6-methyl-2-pyrrolidin-1-ylpyrimidin-4-yl)amino]phenyl]acetamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~211.69 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (5.29 mM) (saturation unknown) in 10% DMSO + 40% PEG300 +5% Tween-80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 + to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.1169 mL 10.5843 mL 21.1685 mL
5 mM 0.4234 mL 2.1169 mL 4.2337 mL
10 mM 0.2117 mL 1.0584 mL 2.1169 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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