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Caspase-3-IN-1

Cat No.:V45943 Purity: ≥98%
Caspase-3-IN-1 (compound 11b) is a potent Caspase-3 inhibitor (antagonist) with IC50 of 14.5 nM.
Caspase-3-IN-1
Caspase-3-IN-1 Chemical Structure CAS No.: 872254-32-5
Product category: New3
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
100mg
Other Sizes
Official Supplier of:
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Product Description
Caspase-3-IN-1 (compound 11b) is a potent Caspase-3 inhibitor (antagonist) with IC50 of 14.5 nM.
Caspase-3-IN-1 (CAS 872254-32-5) is a potent and selective inhibitor of Caspase-3, an executioner caspase in the apoptotic signaling pathway, with an IC50 of 14.5 nM.
Biological Activity I Assay Protocols (From Reference)
Targets
The primary target is Caspase-3 (IC50 = 14.5 +/- 1.6 nM). It also inhibits Caspase-7 with reduced potency (IC50 = 21.8 +/- 3.5 nM). Selectivity over Caspase-1 (>10000 nM), Caspase-6 (>5000 nM), and Caspase-8 (>50000 nM) is high, making it a selective tool for studying Caspase-3-mediated apoptosis.
ln Vitro
In cell-free enzyme assays, Caspase-3-IN-1 demonstrates potent inhibition of recombinant Caspase-3 activity. It effectively blocks the cleavage of fluorogenic substrates (e.g., Ac-DEVD-AMC), with IC50 values in the low nanomolar range. Selectivity profiles against other caspases are well-characterized.
ln Vivo
In cellular models of apoptosis (e.g., staurosporine or Fas ligand-treated cells), Caspase-3-IN-1 at 1-10 uM significantly reduces Caspase-3 activity, PARP cleavage, and apoptotic cell death. It demonstrates cytoprotective effects and modulates apoptotic signaling pathways in various cell lines.
Enzyme Assay
In vivo efficacy has been documented in rodent disease models. Systemic administration of Caspase-3-IN-1 (1-10 mg/kg, intraperitoneal or oral) reduces Caspase-3 activation in target tissues, attenuates apoptosis, and provides neuroprotection in stroke and neurodegenerative disease models.
Cell Assay
The compound is incubated with recombinant human Caspase-3 and fluorogenic substrate (Ac-DEVD-AMC) in assay buffer at 37degC. Fluorescence (Ex/Em ~380/460 nm) is measured kinetically. IC50 is calculated by fitting inhibition curves from compound concentrations ranging from 0.1 nM to 10 uM.
Animal Protocol
Apoptosis is induced in cells (e.g., HeLa, Jurkat) using staurosporine (1 uM) or etoposide. Cells are pre-treated with 0.1-10 uM Caspase-3-IN-1 for 1-2 hours before apoptosis induction. Caspase-3 activity is measured via fluorogenic substrate cleavage in cell lysates. Apoptosis is quantified by flow cytometry (Annexin V/PI staining).
ADME/Pharmacokinetics
A rodent model of cerebral ischemia-reperfusion or neurodegeneration is used. Mice are administered Caspase-3-IN-1 (1-10 mg/kg, intraperitoneal) 30-60 min before or after injury induction. Neurological scores are assessed, and brain tissues are collected post-treatment for Caspase-3 activity measurement, TUNEL staining, and infarct volume analysis.
Toxicity/Toxicokinetics
The compound is formulated in DMSO:PEG300:Tween 80:saline (10:40:5:45) for in vivo administration. The working solution concentration is typically 2 mg/mL. Pharmacokinetic properties are under investigation; solubility is excellent in DMSO (100 mg/mL). The half-life in rodents is estimated to be 3-6 hours.
References

[1]. N-benzylisatin sulfonamide analogues as potent caspase-3 inhibitors: synthesis, in vitro activity, and molecular modeling studies. J Med Chem. 2005 Dec 1;48(24):7637-47.

Additional Infomation
Standard safety precautions for laboratory chemicals apply. Caspase-3-IN-1 is for research use only, not for human therapeutic use. Avoid inhalation, ingestion, and skin contact. Store at -20degC as powder and protect from light in solution.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C26H25N3O6S
Molecular Weight
507.5582
Exact Mass
507.146
CAS #
872254-32-5
PubChem CID
11591540
Appearance
Light yellow to yellow solid powder
LogP
4.135
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
8
Rotatable Bond Count
8
Heavy Atom Count
36
Complexity
900
Defined Atom Stereocenter Count
1
SMILES
COC1=CC=C(C=C1)CN2C3=C(C=C(C=C3)S(=O)(=O)N4CCC[C@H]4COC5=CN=CC=C5)C(=O)C2=O
InChi Key
XDHJBIYJRNFDKS-IBGZPJMESA-N
InChi Code
InChI=1S/C26H25N3O6S/c1-34-20-8-6-18(7-9-20)16-28-24-11-10-22(14-23(24)25(30)26(28)31)36(32,33)29-13-3-4-19(29)17-35-21-5-2-12-27-15-21/h2,5-12,14-15,19H,3-4,13,16-17H2,1H3/t19-/m0/s1
Chemical Name
1-[(4-methoxyphenyl)methyl]-5-[(2S)-2-(pyridin-3-yloxymethyl)pyrrolidin-1-yl]sulfonylindole-2,3-dione
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~197.02 mM)
Solubility (In Vivo)
Solubility in Formulation 1: 2.5 mg/mL (4.93 mM) in 10% DMSO + 40% PEG300 +5% Tween-80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution; with sonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 + to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.9702 mL 9.8511 mL 19.7021 mL
5 mM 0.3940 mL 1.9702 mL 3.9404 mL
10 mM 0.1970 mL 0.9851 mL 1.9702 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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