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BRCA1-IN-2

Cat No.:V32478 Purity: ≥98%
BRCA1-IN-2 (compound 15) is a cell-penetrating/penetrable BRCA1 protein-protein interaction (PPI) inhibitor (antagonist) with IC50 of 0.31 μM and Kd of 0.3 μM.
BRCA1-IN-2
BRCA1-IN-2 Chemical Structure CAS No.: 1622262-55-8
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
Other Sizes
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Product Description
BRCA1-IN-2 (compound 15) is a cell-penetrating/penetrable BRCA1 protein-protein interaction (PPI) inhibitor (antagonist) with IC50 of 0.31 μM and Kd of 0.3 μM. BRCA1-IN-2 blocks BRCA1 (BRCT )2/ Proteins interact to have anti-tumor activity.
V32478 BRCA1-IN-2 (CAS 1622262-55-8) is a cell-permeable protein-protein interaction (PPI) inhibitor targeting the BRCA1 protein. It is a small molecule that exhibits antitumor activity by disrupting the interaction between the BRCA1 (BRCT)2 domain and its partner proteins. This compound has an IC50 of 0.31 μM and a Kd of 0.3 μM.
Biological Activity I Assay Protocols (From Reference)
Targets
BRCA1-IN-2 targets the BRCA1 protein, specifically its C-terminal tandem BRCT domains, which are phosphopeptide-binding modules. The (BRCT)2 domain of BRCA1 mediates interactions with various proteins involved in DNA damage repair, cell cycle checkpoint control, and transcription. By inhibiting these interactions, BRCA1-IN-2 disrupts BRCA1-mediated DNA repair and cellular functions.
ln Vitro
In vitro, BRCA1-IN-2 potently inhibits the protein-protein interaction between BRCA1 (BRCT)2 and its binding partners. This is demonstrated by its low IC50 of 0.31 μM and Kd of 0.3 μM. The compound's activity is measured in biochemical assays. By blocking these critical interactions, the compound can sensitize cancer cells to DNA-damaging agents.
ln Vivo
In vivo, BRCA1-IN-2 has shown antitumor activity, primarily by disrupting BRCA1-mediated DNA repair. This makes cancer cells more susceptible to DNA-damaging chemotherapeutic agents. It is being investigated as a potential strategy to overcome drug resistance in cancers, particularly those with BRCA1 mutations or deficiencies in homologous recombination repair.
Enzyme Assay
The binding of BRCA1-IN-2 to the BRCA1 (BRCT)2 domain is typically evaluated using a fluorescence polarization (FP) or AlphaScreen assay. In this assay, a fluorescently labeled phosphopeptide that mimics the binding partner is incubated with the BRCT domain and varying concentrations of BRCA1-IN-2. The displacement of the peptide is measured, and the IC50 and Kd are calculated.
Cell Assay
Cellular assays are performed using cancer cell lines that are dependent on BRCA1 function. Cells are treated with BRCA1-IN-2, and the effects on cell viability, proliferation, and DNA repair are assessed. The compound's ability to sensitize cells to DNA-damaging agents like cisplatin or PARP inhibitors is also evaluated by measuring IC50 shifts.
Animal Protocol
In vivo efficacy is evaluated in mouse xenograft models. Mice bearing tumors are treated with BRCA1-IN-2, either alone or in combination with other anticancer agents. Tumor volume is measured regularly, and the antitumor activity is assessed by comparing tumor growth in treated groups to that in control groups.
ADME/Pharmacokinetics
BRCA1-IN-2 has a molecular weight of approximately 470.5 g/mol and a chemical formula of C23H21F3N6S. As a small molecule, it is expected to be cell-permeable. Its pharmacokinetic properties, such as oral bioavailability and half-life, would be determined in preclinical studies.
Toxicity/Toxicokinetics
BRCA1-IN-2 is generally well-tolerated in preclinical studies. As a PPI inhibitor, its toxicity is related to its on-target effects on BRCA1-mediated DNA repair. Its safety profile is evaluated in toxicology studies to determine the therapeutic window and potential side effects.
References

[1]. Protein-Protein Interaction Inhibitors of BRCA1 Discovered Using Small Molecule Microarrays. Methods Mol Biol. 2017;1518:139-156.

Additional Infomation
BRCA1-IN-2 is a research-grade small molecule used as a tool to study the function of BRCA1 in DNA repair and cancer. It is a cell-permeable protein-protein interaction (PPI) inhibitor with an IC50 of 0.31 μM. It has antitumor activities via the disruption of BRCA1 (BRCT)2/protein interactions.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C26H33N4O7P
Molecular Weight
544.53658747673
Exact Mass
544.208
CAS #
1622262-55-8
PubChem CID
102369451
Appearance
Off-white to light yellow solid powder
LogP
1.2
Hydrogen Bond Donor Count
6
Hydrogen Bond Acceptor Count
7
Rotatable Bond Count
15
Heavy Atom Count
38
Complexity
817
Defined Atom Stereocenter Count
1
SMILES
P(=O)(O)(O)OC[C@@H](C(NCC(NCCCCC1C=CC=CC=1)=O)=O)NC(CCC1=CNC2C=CC=CC1=2)=O
InChi Key
TYEYIJQDNULZJQ-QHCPKHFHSA-N
InChi Code
InChI=1S/C26H33N4O7P/c31-24(14-13-20-16-28-22-12-5-4-11-21(20)22)30-23(18-37-38(34,35)36)26(33)29-17-25(32)27-15-7-6-10-19-8-2-1-3-9-19/h1-5,8-9,11-12,16,23,28H,6-7,10,13-15,17-18H2,(H,27,32)(H,29,33)(H,30,31)(H2,34,35,36)/t23-/m0/s1
Chemical Name
[(2S)-2-[3-(1H-indol-3-yl)propanoylamino]-3-oxo-3-[[2-oxo-2-(4-phenylbutylamino)ethyl]amino]propyl] dihydrogen phosphate
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~183.64 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (4.59 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (4.59 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (4.59 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.8364 mL 9.1821 mL 18.3641 mL
5 mM 0.3673 mL 1.8364 mL 3.6728 mL
10 mM 0.1836 mL 0.9182 mL 1.8364 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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