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bis-PEG2-endo-BCN

Cat No.:V12799 Purity: ≥98%
bis-PEG2-endo-BCN is a cleavable (degradable) ADC (Antibody-drug conjugate) linker containing 2 Polyethylene glycol (PEG) units, which may be utilized to prepare active Antibody-drug conjugates (ADC).
bis-PEG2-endo-BCN
bis-PEG2-endo-BCN Chemical Structure CAS No.: 1476737-97-9
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
50mg
Other Sizes
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Product Description
bis-PEG2-endo-BCN is a cleavable (degradable) ADC (Antibody-drug conjugate) linker containing 2 Polyethylene glycol (PEG) units, which may be utilized to prepare active Antibody-drug conjugates (ADC).
bis-PEG2-endo-BCN (CAS#: 1476737-97-9) is a bifunctional ADC linker with two endo-BCN groups connected via a PEG2 spacer. The BCN (bicyclononyne) group can react with azide-tagged biomolecules via strain-promoted azide-alkyne cycloaddition (SPAAC), a copper-free click chemistry reaction. This linker facilitates dual strain-promoted click conjugations in ADC synthesis.
Biological Activity I Assay Protocols (From Reference)
Targets
The two BCN groups react with azide-containing molecules via copper-free click chemistry (SPAAC). The hydrophilic PEG spacer increases solubility in aqueous media. This is a cleavable (degradable) ADC linker that enables dual conjugation of biomolecules.
ln Vitro
ADC cytotoxins are connected to antibodies through an ADC connector to form ADCs [1].
In vitro activity is primarily related to its function as an ADC linker. bis-PEG2-endo-BCN enables the conjugation of antibodies to cytotoxic payloads via click chemistry. The PEG spacer provides aqueous solubility and flexibility. Click reaction efficiency is assessed by HPLC, mass spectrometry, or gel electrophoresis.
ln Vivo
In vivo activity of bis-PEG2-endo-BCN is primarily inferred from its use in ADC development. ADCs synthesized using this linker deliver therapeutic agents to specific cells or tissues. The cleavable nature allows for payload release at the target site. No direct in vivo activity data are specifically available for this linker alone.
Enzyme Assay
In vitro assays for bis-PEG2-endo-BCN typically involve evaluating click chemistry reactivity with azide-containing molecules. Reaction efficiency is assessed by HPLC, mass spectrometry, or gel electrophoresis. Purity is assessed by HPLC. Solubility is evaluated in aqueous and organic solvents. The compound is characterized by NMR and mass spectrometry.
Cell Assay
Cell-based assays for bis-PEG2-endo-BCN are conducted in the context of ADC activity. Target cells expressing the antigen of interest are treated with ADCs synthesized using this linker. Cytotoxicity is measured by MTT or CellTiter-Glo assays. Antigen-specific cell killing is compared to non-targeting controls. Internalization and trafficking of ADCs are assessed by immunofluorescence microscopy.
Animal Protocol
In vivo animal studies for bis-PEG2-endo-BCN are conducted in the context of ADC efficacy. Tumor-bearing mice are treated with ADCs synthesized using this linker, and tumor growth inhibition is monitored. Pharmacokinetic parameters are evaluated by measuring ADC levels in blood and tissues. Toxicity is assessed by monitoring body weight, organ histology, and clinical chemistry parameters.
ADME/Pharmacokinetics
As a PEG-based linker (molecular weight 500.64, formula C28H40N2O6), bis-PEG2-endo-BCN has favorable aqueous solubility due to the hydrophilic PEG spacer. The BCN groups are stable under physiological conditions. No specific PK data are available for this linker alone; its PK profile is determined by the conjugated molecule.
Toxicity/Toxicokinetics
No detailed toxicology data are specifically available for bis-PEG2-endo-BCN. The compound is for research use only and not intended for therapeutic use. Standard laboratory safety precautions should be followed. Comprehensive toxicological evaluation has not been reported.
References

[1]. Strategies and challenges for the next generation of antibody-drug conjugates. Nat Rev Drug Discov. 2017 May;16(5):315-337.

Additional Infomation
Bis-PEG2-endo-BCN (CAS#: 1476737-97-9) is a bifunctional ADC linker with two endo-BCN groups connected via a PEG2 spacer. It is used for dual strain-promoted azide-alkyne click conjugations in ADC synthesis. Molecular weight: 500.64, formula: C28H40N2O6. It is for research use only and not an approved therapeutic agent.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C28H40N2O6
Molecular Weight
500.62700843811
Exact Mass
500.288
CAS #
1476737-97-9
PubChem CID
98813933
Appearance
Typically exists as solid at room temperature
LogP
4.1
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
6
Rotatable Bond Count
15
Heavy Atom Count
36
Complexity
772
Defined Atom Stereocenter Count
4
SMILES
C1C[C@@H]2[C@@H](C2COC(=O)NCCOCCOCCNC(=O)OCC3[C@H]4[C@@H]3CCC#CCC4)CCC#C1
InChi Key
NISHVKOYJUQOBR-ICFBRBJFSA-N
InChi Code
InChI=1S/C28H40N2O6/c31-27(35-19-25-21-9-5-1-2-6-10-22(21)25)29-13-15-33-17-18-34-16-14-30-28(32)36-20-26-23-11-7-3-4-8-12-24(23)26/h21-26H,5-20H2,(H,29,31)(H,30,32)/t21-,22+,23-,24+,25?,26?
Chemical Name
[(1R,8S)-9-bicyclo[6.1.0]non-4-ynyl]methyl N-[2-[2-[2-[[(1R,8S)-9-bicyclo[6.1.0]non-4-ynyl]methoxycarbonylamino]ethoxy]ethoxy]ethyl]carbamate
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~199.75 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (4.99 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: 2.5 mg/mL (4.99 mM) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), suspension solution; with ultrasonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (4.99 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.9975 mL 9.9874 mL 19.9748 mL
5 mM 0.3995 mL 1.9975 mL 3.9950 mL
10 mM 0.1997 mL 0.9987 mL 1.9975 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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