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BDP-13176

Alias: BDP 13176; BDP-13176; BDP13176;
Cat No.:V4410 Purity: ≥98%
BDP-13176 is a potent fascin 1 inhibitor (antagonist) with Kd of 90 nM and IC50 of 240 nM.
BDP-13176
BDP-13176 Chemical Structure CAS No.: 2290660-61-4
Product category: Others 6
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
BDP-13176 is a potent fascin 1 inhibitor (antagonist) with Kd of 90 nM and IC50 of 240 nM. BDP-13176 may be used to be an anti-metastatic agent.
Biological Activity I Assay Protocols (From Reference)
Targets
The fascin-1 bundling activity is inhibited by BDP-13176 (0-1 μM) [1].
ln Vitro
The fascin-1 bundling activity is inhibited by BDP-13176 (0-1 μM) [1].
BDP-13176 inhibited fascin-mediated bundling of filamentous actin (F-actin) in a biochemical assay with an IC50 of 240 ± 0.01 nM.[1]
The compound exhibited favorable physicochemical properties: low lipophilicity (LogD7.4 = 1.8) and reasonable kinetic solubility (midpoint = 65 µM).[1]
It demonstrated moderate stability in human and mouse liver microsomes (Human Clint = 6.4 µL/min/mg protein; Mouse Clint = 11.8 µL/min/mg protein).[1]
Caco-2 permeability assay showed low permeability (A-B Papp = 0.15 x 10-6 cm/s) and high efflux (efflux ratio = 37.8).[1]
Enzyme Assay
The binding affinity of BDP-13176 for fascin was determined using Surface Plasmon Resonance (SPR). Serial dilutions of the compound were injected over a fascin-immobilized chip, and the equilibrium dissociation constant (Kd) was calculated from the sensorgram data, yielding a Kd of 85 ± 0.02 nM.[1]
Isothermal Titration Calorimetry (ITC) was also used to confirm binding, where aliquots of the compound were titrated into a fascin solution, and the heat change was measured to determine the Kd, which was 50 nM.[1]
A fluorescence-based in vitro F-actin bundling assay was developed to measure functional inhibition. Fascin was incubated with pre-polymerized, pyrene-labeled F-actin in the presence of varying concentrations of BDP-13176. The decrease in fluorescence due to bundling (and subsequent sedimentation) was monitored, and the concentration causing 50% inhibition (IC50) was calculated.[1]
ADME/Pharmacokinetics
BDP-13176 exhibited low lipophilicity, with a measured LogD7.4 value of 1.8. [1]
Its kinetic solubility was determined to be 65 µM (midpoint). [1]
Its in vitro metabolic stability was evaluated in human and mouse liver microsomes, showing moderate intrinsic clearance (human liver microsome intrinsic clearance = 6.4 µL/min/mg protein; mouse liver microsome intrinsic clearance = 11.8 µL/min/mg protein). [1]
Its permeability was evaluated using a Caco-2 cell monolayer model. The apparent permeability from the apex to the outer side of the basement (AB Papp) was low at 0.15 x 10-6 cm/s, and the compound exhibited high efflux, with an efflux ratio of 37.8. [1]
References

[1]. Structure-based design, synthesis and biological evaluation of a novel series of isoquinolone and pyrazolo[4,3-c]pyridine inhibitors of fascin 1 as potential anti-metastatic agents. Bioorg Med Chem Lett. 2019;29(8):1023-1029.

Additional Infomation
Fascin is an actin bundler that is overexpressed in aggressive cancers and promotes cell migration and invasion. Inhibition of Fascin is a potential anti-metastatic strategy. [1]
BDP-13176 was developed from a fragment lead compound through structure-based drug design. It binds in the inducible pocket between the first two β-trefoil domains of Fascin, resulting in a significant conformational change in domain 1. This change is thought to deform the actin-binding region of Fascin, thereby disrupting its bundler activity. [1]
This compound provides a promising starting point for the development of therapies targeting Fascin. [1]
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C24H22CL2N6O2
Molecular Weight
497.3765
Exact Mass
496.12
Elemental Analysis
C, 57.96; H, 4.46; Cl, 14.25; N, 16.90; O, 6.43
CAS #
2290660-61-4
PubChem CID
137333984
Appearance
Solid powder
LogP
2.1
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
5
Heavy Atom Count
34
Complexity
785
Defined Atom Stereocenter Count
0
InChi Key
BMOUOZDRMBLNSI-UHFFFAOYSA-N
InChi Code
InChI=1S/C24H22Cl2N6O2/c25-20-2-1-15(11-21(20)26)13-31-14-19(23(33)30-16-3-7-27-8-4-16)22-18(24(31)34)12-29-32(22)17-5-9-28-10-6-17/h1-4,7-8,11-12,14,17,28H,5-6,9-10,13H2,(H,27,30,33)
Chemical Name
5-[(3,4-dichlorophenyl)methyl]-4-oxo-1-piperidin-4-yl-N-pyridin-4-ylpyrazolo[4,3-c]pyridine-7-carboxamide
Synonyms
BDP 13176; BDP-13176; BDP13176;
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~125 mg/mL (~251.32 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.08 mg/mL (4.18 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: 2.08 mg/mL (4.18 mM) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), suspension solution; with ultrasonication.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.08 mg/mL (4.18 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.0105 mL 10.0527 mL 20.1054 mL
5 mM 0.4021 mL 2.0105 mL 4.0211 mL
10 mM 0.2011 mL 1.0053 mL 2.0105 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
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Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
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