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Azido-PEG7-amine

Cat No.:V12220 Purity: ≥98%
Azido-PEG7-amine is a non-cleavable (non-degradable) 7-unit PEG-ADC linker used for the synthesis of Antibody-drug conjugates (ADC).
Azido-PEG7-amine
Azido-PEG7-amine Chemical Structure CAS No.: 1333154-77-0
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
Azido-PEG7-amine is a non-cleavable (non-degradable) 7-unit PEG-ADC linker used for the synthesis of Antibody-drug conjugates (ADC). Azido-PEG7-amine is also a PEG-based PROTAC (PROteolysis TArgeting Chimera) linker that can be used for PROTAC synthesis. Azido-PEG7-amine is a reagent for click chemistry. It has an Azide (N3) moiety and could undergo CuAAc (copper-catalyzed azide-alkyne cycloaddition reaction) with compounds bearing an Alkyne group. SPAAC (Strain-promoted alkyne-azide cycloaddition) may also happen with compounds bearing a BCN or DBCO group.
Azido-PEG7-amine (CAS#: 1333154-77-0) is a non-cleavable, 7-unit polyethylene glycol (PEG)-based linker containing an azide group and a terminal primary amine. It is widely employed as a bifunctional linker in the synthesis of Antibody-Drug Conjugates (ADCs) and Proteolysis Targeting Chimeras (PROTACs). The hydrophilic PEG spacer enhances aqueous solubility and reduces steric hindrance during bioconjugation. This compound is a key building block in chemical biology and drug delivery research.
Biological Activity I Assay Protocols (From Reference)
Targets
Azido-PEG7-amine itself does not bind to a specific biological target. Its "target" is defined by the molecules it links together in ADC and PROTAC applications. In ADCs, it connects a monoclonal antibody to a cytotoxic payload. In PROTACs, it joins a ligand for an E3 ubiquitin ligase to a ligand for a target protein of interest. The azide group enables click chemistry with alkyne, DBCO, or BCN groups.
ln Vitro
An ADC cytotoxin is connected to an antibody by use of an ADC linker to form an ADC. Two distinct ligands, one for the E3 ubiquitin ligase and the other for the target protein, are present in PROTAC and are joined by a linker. PROTAC targets and selectively degrades target proteins by means of the intracellular ubiquitin-proteasome system.
In vitro activity is primarily related to its function as a linker. It enables the formation of stable conjugates via copper-catalyzed or copper-free click chemistry. The efficiency of conjugation is assessed by the formation of ADC or PROTAC molecules. The PEG spacer reduces nonspecific binding and aggregation of the conjugated biomolecules in cell-based assays. No direct pharmacological activity is attributed to the linker itself.
ln Vivo
In vivo activity is inferred from the performance of ADCs or PROTACs synthesized using this linker. The non-cleavable nature of the linker provides stability in circulation. The PEG spacer improves the pharmacokinetic properties of the conjugate by increasing solubility and reducing immunogenicity. No direct in vivo activity is associated with the linker alone.
Enzyme Assay
In vitro assays for Azido-PEG7-amine typically involve evaluating the efficiency of click chemistry conjugation. The azide group is reacted with alkyne-containing molecules in the presence of copper catalysts or with DBCO/BCN groups in copper-free reactions. Reaction progress is monitored by HPLC, mass spectrometry, or gel electrophoresis. Purity is assessed by HPLC, and solubility is evaluated in aqueous and organic solvents.
Cell Assay
Cell-based assays are conducted in the context of the final ADC or PROTAC molecule. Cells are treated with the conjugate and evaluated for target-specific cytotoxicity (for ADCs) or protein degradation (for PROTACs). Biotinylated or fluorophore-labeled versions of the linker may be used to track cellular uptake and localization via flow cytometry or fluorescence microscopy. Cytotoxicity is measured by MTT or CellTiter-Glo assays.
Animal Protocol
In vivo animal studies are performed with ADCs or PROTACs containing this linker. Tumor-bearing mice are treated with the conjugate, and tumor growth inhibition is monitored. Pharmacokinetic parameters are evaluated by measuring conjugate levels in blood and tissues. Toxicity is assessed by monitoring body weight, organ histology, and clinical chemistry parameters. The linker's stability in circulation is a key parameter evaluated in these studies.
ADME/Pharmacokinetics
As a PEG-based linker (molecular weight 394.46, formula C16H34N4O7), Azido-PEG7-amine has favorable aqueous solubility due to the hydrophilic PEG spacer. No specific pharmacokinetic data are available for the linker alone; its PK profile is determined by the conjugated molecule. The non-cleavable nature contributes to conjugate stability in circulation.
Toxicity/Toxicokinetics
No detailed toxicology data are specifically available for Azido-PEG7-amine. PEG-based compounds are generally considered to have low toxicity and good biocompatibility. The compound is for research use only and not intended for therapeutic use. Standard laboratory safety precautions should be followed when handling this compound.
References

[1]. Macrocyclic peptides useful as immunomodulators. WO2016077518A1.

Additional Infomation
Azido-PEG7-amine (CAS#: 1333154-77-0) is a non-cleavable, 7-unit PEG-based linker for ADCs and PROTACs. It contains an azide group for click chemistry and a primary amine for conjugation. It is a research tool for bioconjugation and drug delivery. Molecular weight: 394.46, formula: C16H34N4O7.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C16H34N4O7
Molecular Weight
394.463764667511
Exact Mass
394.243
CAS #
1333154-77-0
PubChem CID
51341045
Appearance
Light yellow to yellow liquid
LogP
0.524
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
10
Rotatable Bond Count
23
Heavy Atom Count
27
Complexity
334
Defined Atom Stereocenter Count
0
SMILES
O(CCOCCOCCOCCN=[N+]=[N-])CCOCCOCCOCCN
InChi Key
VZKXLNRXAFTBOW-UHFFFAOYSA-N
InChi Code
InChI=1S/C16H34N4O7/c17-1-3-21-5-7-23-9-11-25-13-15-27-16-14-26-12-10-24-8-6-22-4-2-19-20-18/h1-17H2
Chemical Name
2-[2-[2-[2-[2-[2-[2-(2-azidoethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethanamine
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~253.51 mM)
H2O : ~100 mg/mL (~253.51 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (6.34 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (6.34 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (6.34 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


Solubility in Formulation 4: 120 mg/mL (304.21 mM) in PBS (add these co-solvents sequentially from left to right, and one by one), clear solution; with ultrasonication.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.5351 mL 12.6756 mL 25.3511 mL
5 mM 0.5070 mL 2.5351 mL 5.0702 mL
10 mM 0.2535 mL 1.2676 mL 2.5351 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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