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ATP-Red 1

Alias: ATP-Red 1; 1847485-97-5; [2-[3',6'-bis(diethylamino)-3-oxospiro[isoindole-1,9'-xanthene]-2-yl]phenyl]boronic acid; (2-(3',6'-Bis(diethylamino)-3-oxospiro[isoindoline-1,9'-xanthen]-2-yl)phenyl)boronic acid;
Cat No.:V32137 Purity: ≥98%
ATP-Red 1 is a multi-site binding switchable fluorescent probe that can selectively and quickly detect ATP content in living cells.
ATP-Red 1
ATP-Red 1 Chemical Structure CAS No.: 1847485-97-5
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
Other Sizes
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description
ATP-Red 1 is a multi-site binding switchable fluorescent probe that can selectively and quickly detect ATP content in living cells.
Biological Activity I Assay Protocols (From Reference)
Targets
Fluorescent probe/dye
ln Vitro
ATP-Red 1 is a switchable fluorescent probe with multiple binding sites that may respond selectively and quickly to ATP levels in living cells. The highest absorption and emission wavelengths are 570/566 and 590/585 nm, respectively. ATP-Red 1 has strong membrane permeability, and its fluorescence intensity increases by 5.6 times in the presence of 5 mM ATP. After KCN inhibited OXPHOS, ATP-Red 1 (2.5 μM, 20 minutes) showed lower fluorescence, resulting in reduced mitochondrial ATP levels in OSCC cells [1].
Cell Assay
1. Solution Preparation
1.1 Stock Solution Preparation
• Solvent: DMSO
• Concentration: Recommended 10 mM
• Storage: Aliquot and store at -20°C or -80°C, protected from light. Avoid repeated freeze-thaw cycles.
1.2 Working Solution Preparation
• Dilute the stock solution in PBS or serum-free cell culture medium to a final concentration of 1–10 µM (optimize based on experimental conditions).
• Note: Prepare working solution immediately before use and protect from light.
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2. Cell Staining Protocol
2.1 Cell Preparation
• Suspend cells in 100 µL PBS in a 96-well plate at a density of 2×10⁵ cells per well.
2.2 ATP-Red 1 Staining
• Add ATP-Red 1 to achieve a final concentration of 5–10 µM.
2.3 Incubation
• Incubate cells at room temperature or 37°C for 15 min (extend to 30 min for live-cell imaging).
2.4 Solution Removal
• Remove the ATP-Red 1 working solution after incubation.
2.5 Fluorescence Detection
• Analyze using a fluorescence microscope (Ex/Em = 510/590 nm).
References

[1]. A Multisite-Binding Switchable Fluorescent Probe for Monitoring Mitochondrial ATP Level Fluctuation in Live Cells. Angew Chem Int Ed Engl. 2016 Jan 26;55(5):1773-6.

Additional Infomation
Adenosine triphosphate (ATP), commonly produced in mitochondria, is required by almost all the living organisms; thus fluorescent probes for monitoring mitochondrial ATP levels fluctuation are essential and highly desired. Herein, we report a multisite-binding switchable fluorescent probe, ATP-Red 1, which selectively and rapidly responds to intracellular concentrations of ATP. Live-cell imaging indicated that ATP-Red 1 mainly localized to mitochondria with good biocompatibility and membrane penetration. In particular, with the help of ATP-Red 1, we successfully observed not only the decreased mitochondrial ATP levels in the presence of KCN and starvation state, but also the increased mitochondrial ATP levels in the early stage of cell apoptosis. These results indicate that ATP-Red 1 is a useful tool for investigating ATP-relevant biological processes. [1]
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C34H36BN3O4
Molecular Weight
561.478348731995
Exact Mass
561.279
CAS #
1847485-97-5
PubChem CID
132274056
Appearance
Pale purple to purple solid powder
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
6
Rotatable Bond Count
8
Heavy Atom Count
42
Complexity
893
Defined Atom Stereocenter Count
0
SMILES
O1C2C=C(C=CC=2C2(C3C=CC(=CC1=3)N(CC)CC)C1C=CC=CC=1C(N2C1C=CC=CC=1B(O)O)=O)N(CC)CC
InChi Key
SSNKNUIFMZUJTL-UHFFFAOYSA-N
InChi Code
InChI=1S/C34H36BN3O4/c1-5-36(6-2)23-17-19-27-31(21-23)42-32-22-24(37(7-3)8-4)18-20-28(32)34(27)26-14-10-9-13-25(26)33(39)38(34)30-16-12-11-15-29(30)35(40)41/h9-22,40-41H,5-8H2,1-4H3
Chemical Name
[2-[3',6'-bis(diethylamino)-3-oxospiro[isoindole-1,9'-xanthene]-2-yl]phenyl]boronic acid
Synonyms
ATP-Red 1; 1847485-97-5; [2-[3',6'-bis(diethylamino)-3-oxospiro[isoindole-1,9'-xanthene]-2-yl]phenyl]boronic acid; (2-(3',6'-Bis(diethylamino)-3-oxospiro[isoindoline-1,9'-xanthen]-2-yl)phenyl)boronic acid;
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~50 mg/mL (~89.05 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (4.45 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (4.45 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.7810 mL 8.9050 mL 17.8101 mL
5 mM 0.3562 mL 1.7810 mL 3.5620 mL
10 mM 0.1781 mL 0.8905 mL 1.7810 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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