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Amino-PEG5-alcohol

Cat No.:V8602 Purity: ≥98%
Amino-PEG5-alcohol is a PEG analogue containing an amino group with a hydroxyl group.
Amino-PEG5-alcohol
Amino-PEG5-alcohol Chemical Structure CAS No.: 34188-11-9
Product category: PROTAC Linkers
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5g
Other Sizes
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description
Amino-PEG5-alcohol is a PEG analogue containing an amino group with a hydroxyl group. The amino group is reactive with carboxylic acids, activated NHS esters, carbonyls (ketone, aldehyde) etc. The hydroxyl group enables further derivatization or replacement with other reactive functional groups. PEG Linkers may be useful in the development of antibody drug conjugates and drug delivery methods.
Amino-PEG5-alcohol (CAS#: 34188-11-9) is a polyethylene glycol (PEG) derivative containing an amino group and a hydroxyl group. Its molecular formula is C??H??NO? (exact formula not specified in provided text), and it is a versatile reagent used in bioconjugation, drug delivery, and the synthesis of PROTACs and ADCs. The hydrophilic PEG5 spacer increases solubility in aqueous media. The amine group is reactive with carboxylic acids, activated NHS esters, and carbonyls, while the hydroxyl group can be used for further functionalization. This compound is used as a non-cleavable linker in the construction of antibody-drug conjugates (ADCs) and PROTACs.
Biological Activity I Assay Protocols (From Reference)
Targets
Amino-PEG5-alcohol is a chemical linker and does not have a specific biological target such as a receptor or enzyme. Its "target" is the functional groups on other molecules to which it can be conjugated. The primary amine (-NH2) group is reactive towards carboxylic acids, activated NHS esters, and carbonyl groups (aldehydes, ketones), forming stable amide or imine bonds. The terminal hydroxyl (-OH) group can be further derivatized or activated. In the context of PROTACs, this linker connects the E3 ligase ligand to the target protein ligand. In ADCs, it serves as a non-cleavable spacer between the antibody and the cytotoxic payload.
ln Vitro
Two distinct ligands, one for the E3 ubiquitin ligase and the other for the target protein, are present in PROTAC and are joined by a linker. PROTAC selectively degrades target proteins by means of the intracellular ubiquitin-proteasome system [1]. ADC is made up of antibodies that are connected to ADC cytotoxins by an ADC linker [2].
Amino-PEG5-alcohol itself does not possess intrinsic biological activity in cell-based assays. Its activity is defined by its use as a building block to create biologically active conjugates. For example, when used to synthesize a PROTAC, the resulting molecule can induce the degradation of a target protein in cells. The PEG5 spacer ensures that the conjugate remains soluble and flexible. In vitro, the conjugation efficiency of Amino-PEG5-alcohol to other molecules can be assessed by analytical techniques such as HPLC or mass spectrometry.
ln Vivo
Amino-PEG5-alcohol is not intended for direct in vivo administration as a therapeutic agent. Its in vivo relevance is as a linker in the construction of ADCs, PROTACs, or other drug conjugates that are then administered in vivo. The PEG5 spacer in the final conjugate can influence its pharmacokinetics by increasing its hydrodynamic volume, reducing renal clearance, and extending its half-life in circulation. The non-cleavable nature of this linker ensures that the conjugate remains intact in the bloodstream.
Enzyme Assay
Non-cellular in vitro assays for Amino-PEG5-alcohol are chemical, not biological. They involve characterizing its purity and reactivity. For example, its purity can be determined by HPLC. Its reactivity can be assessed by reacting it with a model compound containing an activated ester (e.g., N-hydroxysuccinimide ester) and monitoring the formation of the amide bond by mass spectrometry or NMR. The reaction is typically carried out in an organic solvent such as DMSO or DMF, and the progress is monitored by TLC or LC-MS.
Cell Assay
Cellular assays are not performed with Amino-PEG5-alcohol itself, but rather with the conjugates it helps create. For instance, a PROTAC synthesized using this linker can be tested in cell-based degradation assays. Cells expressing the target protein are treated with varying concentrations of the PROTAC for 6-24 hours. The levels of the target protein are then measured by Western blotting. The DC50 (concentration for 50% degradation) is determined from the concentration-response curve. The specificity of degradation can be confirmed by measuring the levels of other proteins.
Animal Protocol
In vivo animal studies are performed with the final PROTAC or ADC synthesized using Amino-PEG5-alcohol, not with the linker itself. A typical protocol involves administering the conjugate intravenously to tumor-bearing mouse models. Mice are dosed with the conjugate at various concentrations on a schedule such as once weekly for 2-3 weeks. Tumor volume and body weight are measured regularly to assess efficacy and toxicity. Pharmacodynamic markers, such as target protein levels in tumor tissue, are also evaluated.
ADME/Pharmacokinetics
Amino-PEG5-alcohol is a chemical linker and does not have pharmacokinetic properties as an active drug. However, when used to create ADCs or PROTACs, the PEG5 linker influences the overall PK of the conjugate. The hydrophilic PEG spacer increases the hydrodynamic volume of the conjugate, reducing renal clearance and extending the half-life in circulation. The non-cleavable nature of the linker ensures that the conjugate remains intact in the bloodstream. For the linker itself, specific PK data are not available.
Toxicity/Toxicokinetics
Amino-PEG5-alcohol is a chemical reagent for research use only and is not intended for therapeutic or diagnostic use in humans. Toxicity data for the compound itself are limited, but standard laboratory safety precautions should be followed when handling it. As an amine-containing compound, it may cause irritation. In the context of ADC or PROTAC development, the toxicity is primarily attributed to the cytotoxic payload, not the PEG linker. The compound should be stored under appropriate conditions to prevent degradation.
References

[1]. Bifunctional molecules for degradation of egfr and methods of use. WO2017185036A1.

[2]. Derivatives of dolastatin 10 and uses thereof. WO2016192527A1.

Additional Infomation
Amino-PEG5-alcohol is a key building block in the field of bioconjugation and drug delivery. Its heterobifunctionality (amine and alcohol) allows for selective functionalization and conjugation. It is part of a broader family of PEG-based linkers used in the synthesis of ADCs and PROTACs. The compound is commercially available and is a standard reagent in many research laboratories. It is not a drug itself and has no clinical trial or regulatory approval status. Its value lies in its utility as a tool for creating more complex therapeutic molecules.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C10H23NO5
Molecular Weight
237.29332
Exact Mass
237.157
CAS #
34188-11-9
Related CAS #
34188-11-9;
PubChem CID
21737076
Appearance
Colorless to light yellow liquid
Density
1.1±0.0 g/cm3
Boiling Point
346.3±0.0 °C at 760 mmHg
Flash Point
163.2±0.0 °C
Vapour Pressure
0.0±0.0 mmHg at 25°C
Index of Refraction
1.460
LogP
-2.44
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
6
Rotatable Bond Count
13
Heavy Atom Count
16
Complexity
126
Defined Atom Stereocenter Count
0
SMILES
C(COCCOCCOCCOCCO)N
InChi Key
DEOUHEFHTMMUCM-UHFFFAOYSA-N
InChi Code
InChI=1S/C10H23NO5/c11-1-3-13-5-7-15-9-10-16-8-6-14-4-2-12/h12H,1-11H2
Chemical Name
2-[2-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]ethoxy]ethanol
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~421.43 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (10.54 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (10.54 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (10.54 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 4.2143 mL 21.0713 mL 42.1425 mL
5 mM 0.8429 mL 4.2143 mL 8.4285 mL
10 mM 0.4214 mL 2.1071 mL 4.2143 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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