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N3-Ph-NHSester

Cat No.:V52897 Purity: ≥98%
N3-Ph-NHS ester is a non-cleavable (non-degradable) ADC linker that may be utilized to prepare antibody-conjugated active molecules (ADCs).
N3-Ph-NHSester
N3-Ph-NHSester Chemical Structure CAS No.: 53053-08-0
Product category: ADC Linker
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
100mg
Other Sizes
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Product Description
N3-Ph-NHS ester is a non-cleavable (non-degradable) ADC linker that may be utilized to prepare antibody-conjugated active molecules (ADCs). N3-Ph-NHS ester is a reagent for click chemistry. It has an Azide (N3) moiety and could undergo CuAAc (copper-catalyzed azide-alkyne cycloaddition reaction) with compounds bearing an Alkyne group. SPAAC (Strain-promoted alkyne-azide cycloaddition) may also happen with compounds bearing a BCN or DBCO group.
N3-Ph-NHS ester (CAS 53053-08-0), also known as N-Hydroxysuccinimidyl-4-azidobenzoate or Succinimidyl 4-azidobenzoate, is a non-cleavable ADC linker used in the synthesis of antibody-drug conjugates (ADCs). It is a heterobifunctional crosslinker featuring an amine-reactive NHS ester group and a photoactivatable aryl azide group connected by a short, rigid benzoate linker. It is also a click chemistry reagent containing an azide group.
Biological Activity I Assay Protocols (From Reference)
Targets
Non-cleavable Linker
The primary targets of N3-Ph-NHS ester are the linker structures in ADC technology. As a non-cleavable ADC linker, it connects the antibody to the cytotoxic payload through NHS ester-amine conjugation and aryl azide photoactivation. The compound is a click chemistry reagent, containing an azide moiety that can undergo copper-catalyzed azide-alkyne cycloaddition (CuAAc) with alkyne-containing molecules. It does not directly bind to enzymes or receptors but serves as a structural component.
ln Vitro
In vitro, N3-Ph-NHS ester functions as a structural linker for ADC synthesis. The NHS ester group reacts with primary amines on antibodies, while the azide group can be used for further conjugation via click chemistry. This heterobifunctional nature allows for the creation of stable ADCs with defined conjugation sites. The compound itself does not exhibit direct cellular activity but enables the bioactivity of the conjugated therapeutic agent.
ln Vivo
In vivo activity of N3-Ph-NHS ester is realized through the ADC constructs in which it is incorporated. As a non-cleavable linker, it provides stability to the ADC in circulation, ensuring the cytotoxic payload remains attached until target cell engagement. The linker's stability and lack of degradation contribute to the overall efficacy of the ADC. The in vivo efficacy depends on the specific antibody and payload used in the conjugate.
Enzyme Assay
In vitro enzyme/receptor binding assays for N3-Ph-NHS ester focus on evaluating the stability and reactivity of the linker. The compound is tested for its ability to conjugate to antibodies via NHS ester-amine reaction and to undergo click chemistry with alkyne-containing molecules. The conjugation efficiency is monitored by HPLC or mass spectrometry. The stability of the linker under physiological conditions is also assessed by incubating in buffer solutions at 37°C.
Cell Assay
In vitro cellular assays for N3-Ph-NHS ester involve testing the complete ADC molecule rather than the linker alone. Cancer cell lines are treated with the ADC, and cell viability is assessed using CCK-8 or MTT assays after 72 hours. The linker's contribution to ADC stability and activity is evaluated by comparing the activity of the ADC with that of the unconjugated payload. The linker itself does not directly affect cell viability.
Animal Protocol
In vivo animal studies for N3-Ph-NHS ester are conducted using the final ADC construct. Tumor-bearing xenograft models receive the ADC via intravenous injection. Tumor volume and body weight are monitored over 2-4 weeks to assess efficacy and tolerability. The linker contributes to the stability and PK profile of the ADC. Detailed in vivo protocols are similar to those used for other ADC linkers.
ADME/Pharmacokinetics
The pharmacokinetic properties of N3-Ph-NHS ester are determined by the ADC in which it is incorporated. The compound has a molecular weight of approximately 247-252 and a molecular formula of C₁₁H₈N₄O₄. It is a non-cleavable linker, providing stability to the ADC in circulation. The linker's stability contributes to a favorable PK profile for the ADC, with prolonged half-life and reduced off-target toxicity.
Toxicity/Toxicokinetics
The toxicity profile of N3-Ph-NHS ester is associated with the ADC in which it is used. As a linker compound, it is considered to have low intrinsic toxicity. Standard toxicity studies for the final ADC include assessment of body weight changes, clinical observations, hematological parameters, and histopathological examination of major organs in animal models. The linker itself does not exhibit significant cytotoxic effects.
Additional Infomation
N3-Ph-NHS ester (CAS 53053-08-0) has a molecular formula of C₁₁H₈N₄O₄ and a molecular weight of approximately 247-252. It is a non-cleavable, heterobifunctional crosslinker featuring an amine-reactive NHS ester group and a photoactivatable aryl azide group connected by a short, rigid benzoate linker. It is used in the synthesis of ADCs and is a click chemistry reagent containing an azide group. The compound is intended for research use only and is not approved for clinical use.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C11H8N4O4
Molecular Weight
260.21
Exact Mass
260.055
CAS #
53053-08-0
PubChem CID
122153
Appearance
Off-white to yellow solid powder
Melting Point
171-172ºC
LogP
1.239
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
6
Rotatable Bond Count
4
Heavy Atom Count
19
Complexity
434
Defined Atom Stereocenter Count
0
SMILES
C1=C(C=CC(=C1)N=[N+]=[N-])C(=O)ON2C(=O)CCC2=O
InChi Key
LWAVGNJLLQSNNN-UHFFFAOYSA-N
InChi Code
InChI=1S/C11H8N4O4/c12-14-13-8-3-1-7(2-4-8)11(18)19-15-9(16)5-6-10(15)17/h1-4H,5-6H2
Chemical Name
(2,5-dioxopyrrolidin-1-yl) 4-azidobenzoate
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : 31.25 mg/mL (120.10 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.08 mg/mL (7.99 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.08 mg/mL (7.99 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.08 mg/mL (7.99 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.8430 mL 19.2152 mL 38.4305 mL
5 mM 0.7686 mL 3.8430 mL 7.6861 mL
10 mM 0.3843 mL 1.9215 mL 3.8430 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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