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2-Fluoroadenine

Alias: 2-Fluoroadenine NSC-27364 NSC27364NSC 27364
Cat No.:V9375 Purity: ≥98%
2-Fluoraudenine is a toxic purine base.
2-Fluoroadenine
2-Fluoroadenine Chemical Structure CAS No.: 700-49-2
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
2-Fluoraudenine is a toxic purine base. 2-Fluoraudenine is toxic to both non-proliferating and proliferating tumor cells. 2-Fluoraudenine may be used in anticancer research.
Biological Activity I Assay Protocols (From Reference)
ln Vitro
2-Fluoroadenine (2 μM; 4 hours) targets one or more enzymes involved in the creation of RNA or proteins, which slows the development of CEM cells [1]. 2- Non-proliferating MRC-5 cells demonstrate cytotoxicity in response to fluorroadenine (0-1000 μM; 96 hours) [1]. 2- Protein, RNA, and DNA synthesis is inhibited in Balb-3T3 cells cultured in serum-free media by fluoroadenine (0.22, 2.2, and 22 μM; 30 hours) [1].
Cytotoxicity in proliferating CEM cells: IC50 after 4-hour exposure was 0.15 ± 0.07 μM. After continuous exposure (72 h), IC50 was 0.10 μM (mean of 2 determinations). The duration of exposure had only a 1.5-fold effect on potency, indicating cytotoxic actions occur early after addition [1].
- In CEM cells, treatment with 2 μM F-Ade (approximately 10× the 4-h IC50) inhibited protein, DNA, and RNA syntheses to similar extents, as measured by incorporation of [³H]leucine, [³H]dThd, and [³H]Urd (or [¹⁴C]Ade for DNA). The pattern was similar to that of cycloheximide, a protein synthesis inhibitor [1].
- F-Ade was toxic to nonproliferating cells. In confluent MRC-5 human diploid fibroblasts (nonproliferating), F-Ade caused a concentration-dependent decrease in attached protein over 96 h, whereas 5-fluorouracil had no effect. The protein concentration in control flasks remained unchanged [1].
- In CEM cells cultured in 0.1% serum (quiescent state), treatment with 1 μg/mL F-Ade resulted in a decline in cell numbers within 24 h, while 5-fluorouracil did not affect cell numbers [1].
- In quiescent Balb-3T3 cells (serum-free medium), F-Ade at 2.2 μM, 0.22 μM, and 0.022 μM inhibited DNA synthesis (to 34%, 84%, 88% of control, respectively), RNA synthesis (to 37%, 64%, 86% of control), and protein synthesis (to 15%, 66%, 76% of control) after 30 h treatment [1].
Cell Assay
Cell Proliferation Assay
Cell Types: CEM cells [1]
Tested Concentrations: 2 μM
Incubation Duration: 4 hrs (hours)
Experimental Results: Inhibition of CEM cell growth by targeting one or more enzymes involved in RNA or protein synthesis.

cell cytotoxicity assay
Cell Types: MRC-5 cells [1]
Tested Concentrations: 0-1000 μM
Incubation Duration: 4 hrs (hours)
Experimental Results: Cytotoxicity was demonstrated in non-proliferating MRC-5 cells.
Cytotoxicity assay (IC50): CEM cells (approximately 300,000 cells/mL) were exposed to various concentrations of F-Ade for 4 hours, then washed and cultured in drug-free medium for 72 hours. Cell growth inhibition was determined. For continuous exposure, cells were incubated with drug for 72 hours [1].
- Macromolecular synthesis inhibition: CEM cells were incubated with 2 μM F-Ade. Four hours later, radiolabeled precursors ([methyl-³H]dThd for DNA, [5-³H]Urd for RNA, [4,5-³H]leucine for protein) were added at 2 μCi/mL. Samples were taken 1, 2, 3, and 4 hours after label addition, and incorporation into acid-precipitable material was measured. For DNA synthesis measurement in the presence of FUra, [8-¹⁴C]Ade was used instead of dThd to avoid thymidylate synthase inhibition artifacts [1].
- Nonproliferating MRC-5 cell toxicity: Confluent MRC-5 cells were treated with various concentrations of F-Ade for 96 hours. Cytotoxicity was assessed by measuring the amount of protein attached to the culture flask. Protein concentration in control flasks was approximately 35 μg/flask [1].
- Quiescent CEM cell study: CEM cells were placed in medium containing 0.1% serum for 48 hours to induce quiescence (dThd incorporation was 10-15% of proliferating cells). Then F-Ade (1 μg/mL) was added, and cell numbers were counted at 24-hour intervals using a Coulter Counter [1].
- Balb-3T3 cell macromolecular synthesis assay: Balb-3T3 cells were seeded in 96-well plates (2-3×10⁴ cells/well) and incubated for 7-9 days until confluent and quiescent. Cells were treated with F-Ade in serum-free medium for 30 hours. For DNA synthesis, cells were pulsed with 1 μCi [³H]dThd/well for 20 hours starting 10 hours after drug addition. For RNA or protein synthesis, cells were pulsed with 1 μCi [³H]Urd or [³H]leucine for 6 hours starting 24 hours after drug addition. Cells were then trypsinized, filtered, and counted [1].
- Metabolism analysis: CEM cells were incubated with 0.03 μM [³H]F-Ade (6300 Ci/mol) for 4 hours. Acid-soluble metabolites were extracted with 0.5 M perchloric acid, neutralized, and analyzed by SAX HPLC using a linear gradient from 5 mM NH₄H₂PO₄ (pH 2.8) to 750 mM NH₄H₂PO₄ (pH 3.7) at 2 mL/min. Fractions were counted for radioactivity. The major metabolite eluted 2-3 min after ATP (peak fractions 35-36) and was identified as F-ATP after digestion with phosphodiesterase and alkaline phosphatase followed by reverse-phase HPLC [1].
- Half-life determination: CEM cells were incubated with 0.03 μM [³H]F-Ade for 4 hours, then washed and resuspended in fresh medium. Samples were taken at various times, and the amount of F-ATP in the acid-soluble pool was measured by SAX HPLC. Half-life of F-ATP was approximately 5 hours (similar to ATP). Half-life of MeP-ribonucleoside triphosphate was approximately 48 hours [1].
- Incorporation into RNA and DNA: CEM cells were incubated with 20 nM [³H]F-Ade (6300 Ci/mol). At 1, 2, and 4 hours, cells were lysed and fractionated on CsCl gradients to separate RNA (pellet) and DNA (band). The isolated RNA and DNA were degraded to nucleosides and analyzed by reverse-phase HPLC. [³H]F-Ado was detected in RNA and [³H]F-dAdo in DNA, confirming incorporation into both macromolecules. Over 60% of F-Ade in the medium was taken up by cells within 4 hours [1].
ADME/Pharmacokinetics
Metabolism: F-Ade is converted to F-ATP in CEM cells. At 0.03 μM F-Ade, 62 pmol F-ATP/10⁶ cells was formed in 4 hours. The concentration of F-ATP formed at equitoxic conditions (0.3 μM F-Ade, causing ~70% growth inhibition) was approximately 13% of the ATP pool (ATP ~700 nmol/10⁶ cells). F-Ade was metabolized as effectively as adenine; 2 μM F-Ade produced ~400 pmol F-ATP/10⁶ cells in 4 hours, comparable to 821 pmol ATP from 3.6 μM adenine. F-Ade did not affect ATP, CTP, UTP, or GTP levels at 0.3 μM, but higher concentrations (10 μM) decreased ATP levels; however, total ATP + F-ATP pool equaled ATP in untreated cells [1].
- Half-life: The half-life of F-ATP in proliferating CEM cells was approximately 5 hours (similar to ATP) [1].
Toxicity/Toxicokinetics
F-Ade was toxic to both proliferating and nonproliferating human cells (CEM, MRC-5, Balb-3T3). Its mechanism involves inhibition of protein and RNA synthesis, which are essential processes in all cells, suggesting potential for systemic toxicity. The paper notes that F-Ade has been previously evaluated as an antitumor agent and found to have no selectivity for tumor versus normal cells in intact animals [1].
References

[1]. Metabolism and metabolic actions of 6-methylpurine and 2-fluoroadenine in human cells. Biochem Pharmacol. 1998;55(10):1673-1681.

Additional Infomation
2-Fluoroadenine is an organofluorine compound, a derivative of adenine, in which the hydrogen atom at position 2 (the carbon atom between the two nitrogen atoms in the pyrimidine ring) is replaced by a fluorine atom. It is an antitumor drug. It belongs to the organofluorine compound class and is also a purine compound. 2-Fluoroadenine is a fluorinated heterocyclic bicyclic compound. Many carbocyclic and acyclic nucleoside analogs are based on 2-fluoroadenine, and these analogs are used in antitumor research.
F-Ade is a toxic purine base that can be generated by E. coli purine nucleoside phosphorylase (PNP) from a nontoxic prodrug (e.g., 2-fluoroadenosine) as part of a suicide gene therapy strategy for cancer [1].
- Unlike 5-fluorouracil and ganciclovir (which primarily target proliferating cells), F-Ade kills nonproliferating cells, which may be advantageous for solid tumors with low growth fractions [1].
- F-Ade is 1000-fold more potent than 5-fluorouracil against CEM cells after 4-hour exposure (IC50 0.15 μM vs. 120 μM) [1].
- F-Ade is incorporated into both RNA and DNA. F-dATP (the deoxyribonucleotide analog) has been shown to be a good substrate for DNA polymerase α (reference cited) [1].
- Cells lacking adenine phosphoribosyltransferase (APRT) are resistant to F-Ade, indicating that conversion to nucleotides is required for cytotoxicity [1].
- The study suggests that F-Ade's mechanism involves inhibition of protein and/or RNA synthesis, possibly through incorporation into RNA disrupting its structure or function [1].
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C5H4FN5
Molecular Weight
163.12
Exact Mass
153.045
CAS #
700-49-2
PubChem CID
12790
Appearance
White to off-white solid powder
Density
1.7±0.1 g/cm3
Boiling Point
676.9±58.0 °C at 760 mmHg
Melting Point
>350 °C(lit.)
Flash Point
363.2±32.3 °C
Vapour Pressure
0.0±2.1 mmHg at 25°C
Index of Refraction
1.783
LogP
-0.01
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
0
Heavy Atom Count
11
Complexity
154
Defined Atom Stereocenter Count
0
InChi Key
WKMPTBDYDNUJLF-UHFFFAOYSA-N
InChi Code
InChI=1S/C5H4FN5/c6-5-10-3(7)2-4(11-5)9-1-8-2/h1H,(H3,7,8,9,10,11)
Chemical Name
1H-Purin-6-amine, 2-fluoro-
Synonyms
2-Fluoroadenine NSC-27364 NSC27364NSC 27364
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~20.83 mg/mL (~136.04 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.08 mg/mL (13.58 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.08 mg/mL (13.58 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 20.8 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 6.1305 mL 30.6523 mL 61.3046 mL
5 mM 1.2261 mL 6.1305 mL 12.2609 mL
10 mM 0.6130 mL 3.0652 mL 6.1305 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
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Clinical Trial Information
NCT Number Recruitment interventions Conditions Sponsor/Collaborators Start Date Phases
NCT00625430 UNKNOWN STATUS Biological: Gene Directed Enzyme Prodrug
Therapy, FP253/Fludarabine
Prostate Cancer Biotech Equity Partners Pty Ltd 2008-03 Phase 1
NCT01310179 COMPLETEDWITH RESULTS Genetic: Ad/PNP and fludarabine monophosphate Head and Neck Cancer PNP Therapeutics, Inc. 2011-02 Phase 1
NCT03935347 WITHDRAWN Drug: Cyclophosphamide
Drug: Fludarabine
Drug: Fludarabine Phosphate
Metastatic Bladder Urothelial Carcinoma
Metastatic Renal Pelvis Urothelial Carcinoma
Metastatic Ureter Urothelial Carcinoma
Metastatic Urethral Urothelial Carcinoma
Roswell Park Cancer Institute 2019-06-20 Phase 2
NCT03326921 SUSPENDED Biological: CD8+ and CD4+ Donor Memory T-cells-expressing HA1-Specific TCR
Drug: Fludarabine
Other: Laboratory Biomarker Analysis
Acute Biphenotypic Leukemia
Acute Lymphoblastic Leukemia
Acute Myeloid Leukemia
Acute Undifferentiated Leukemia
Fred Hutchinson Cancer Center 2018-02-23 Phase 1
NCT04007029 RECRUITING Biological: Chimeric Antigen Receptor T-Cell Therapy
Drug: Cyclophosphamide
Drug: Fludarabine Phosphate
Biological: Tocilizumab
CD19 Positive
CD20 Positive
Recurrent Chronic Lymphocytic Leukemia
Recurrent Diffuse Large B-Cell Lymphoma
Jonsson Comprehensive Cancer Center 2019-10-04 Phase 1
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