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2'-Deoxyadenosine monohydrate

Cat No.:V32432 Purity: ≥98%
2'-Deoxyadenosine monohydrate is deoxyribonucleoside.
2'-Deoxyadenosine monohydrate
2'-Deoxyadenosine monohydrate Chemical Structure CAS No.: 16373-93-6
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
10g
Other Sizes
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Product Description
2'-Deoxyadenosine monohydrate is deoxyribonucleoside. building block/intermediates in chemical synthesis.
V32432 2'-Deoxyadenosine monohydrate (CAS 16373-93-6) is a deoxyribonucleoside that is a derivative of the nucleoside adenosine, differing from the latter by the replacement of the hydroxyl group (-OH) at the 2' position of its ribose sugar moiety with a hydrogen atom (-H). It is a purine nucleoside composed of a deoxyribose sugar, an adenine base, and a phosphate group, and is a fundamental building block of DNA.
Biological Activity I Assay Protocols (From Reference)
Targets
2'-Deoxyadenosine monohydrate is an endogenous metabolite and a DNA nucleoside. It serves as a substrate for various enzymes involved in DNA synthesis and repair, including DNA polymerases and kinases. It can also affect cellular cAMP levels and may be used by some cells as an energy source under conditions of energy stress.
ln Vitro
In vitro, 2'-Deoxyadenosine monohydrate is used as a building block or intermediate in chemical synthesis. It is a substrate for kinases that phosphorylate it to deoxyadenosine monophosphate (dAMP), a precursor for DNA synthesis. In cell culture, it can be added to media to support cell growth and proliferation. Its biological activity is primarily related to its role in nucleotide metabolism.
ln Vivo
In vivo, 2'-Deoxyadenosine monohydrate is a normal constituent of the body's nucleotide pool. It is incorporated into DNA during replication and repair processes. It does not have a direct pharmacological activity but is essential for life. Deficiencies or imbalances in nucleotide pools can lead to various health issues.
Enzyme Assay
Enzymatic assays can be performed to measure the activity of kinases that phosphorylate 2'-Deoxyadenosine. For example, deoxyadenosine kinase can be incubated with 2'-Deoxyadenosine and ATP, and the production of dAMP is measured using HPLC or a coupled enzyme assay. These assays are used to characterize enzyme kinetics and screen for inhibitors.
Cell Assay
Cellular assays with 2'-Deoxyadenosine monohydrate are typically conducted to study nucleotide metabolism and DNA synthesis. Cells are cultured with radiolabeled or otherwise modified 2'-Deoxyadenosine, and its incorporation into DNA is measured. It can also be used to study the effects of nucleoside analogs on cell proliferation and viability.
Animal Protocol
2'-Deoxyadenosine monohydrate is not typically administered as a drug in animal studies. However, it can be used in studies of nucleotide metabolism. For instance, it might be administered to animals to trace metabolic pathways or to study the effects of nucleoside analogs on DNA synthesis and repair.
ADME/Pharmacokinetics
2'-Deoxyadenosine monohydrate has a molecular weight of 269.26 g/mol and a chemical formula of C10H15N5O4. As a naturally occurring nucleoside, it is water-soluble and is efficiently absorbed and metabolized by the body. It is stable as a solid and is typically stored at room temperature.
Toxicity/Toxicokinetics
2'-Deoxyadenosine monohydrate is an endogenous, naturally occurring compound and is generally considered safe. It is a normal metabolite and is not associated with toxicity at physiological concentrations. It is suitable for cell culture applications.
Additional Infomation
2'-Deoxyadenosine monohydrate is a standard nucleoside used extensively in biochemical and molecular biology research. It is employed as a building block for the synthesis of DNA, nucleoside analogs, and other bioactive molecules. It is often used in comparison studies of the functions of adenosine analogues on various biological processes.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C10H15N5O4
Molecular Weight
269.2572
Exact Mass
269.112
CAS #
16373-93-6
PubChem CID
9549172
Appearance
White to off-white solid powder
Density
1.9±0.1 g/cm3
Boiling Point
627.2±65.0 °C at 760 mmHg
Melting Point
185-187ºC
Flash Point
333.1±34.3 °C
Vapour Pressure
0.0±1.9 mmHg at 25°C
Index of Refraction
1.863
LogP
-0.55
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
8
Rotatable Bond Count
2
Heavy Atom Count
19
Complexity
307
Defined Atom Stereocenter Count
3
SMILES
C1[C@@H]([C@H](O[C@H]1N2C=NC3=C(N=CN=C32)N)CO)O.O
InChi Key
WZJWHIMNXWKNTO-VWZUFWLJSA-N
InChi Code
InChI=1S/C10H13N5O3.H2O/c11-9-8-10(13-3-12-9)15(4-14-8)7-1-5(17)6(2-16)18-7;/h3-7,16-17H,1-2H2,(H2,11,12,13);1H2/t5-,6+,7+;/m0./s1
Chemical Name
(2R,3S,5R)-5-(6-aminopurin-9-yl)-2-(hydroxymethyl)oxolan-3-ol;hydrate
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~50 mg/mL (~185.69 mM)
H2O : ~7.14 mg/mL (~26.52 mM)
Solubility (In Vivo)
Solubility in Formulation 1: ≥ 2.5 mg/mL (9.28 mM) (saturation unknown) in 10% DMSO + 40% PEG300 + 5% Tween80 + 45% Saline (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 400 μL PEG300 and mix evenly; then add 50 μL Tween-80 to the above solution and mix evenly; then add 450 μL normal saline to adjust the volume to 1 mL.
Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH₂ O to obtain a clear solution.

Solubility in Formulation 2: ≥ 2.5 mg/mL (9.28 mM) (saturation unknown) in 10% DMSO + 90% (20% SBE-β-CD in Saline) (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of 20% SBE-β-CD physiological saline solution and mix evenly.
Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.

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Solubility in Formulation 3: ≥ 2.5 mg/mL (9.28 mM) (saturation unknown) in 10% DMSO + 90% Corn Oil (add these co-solvents sequentially from left to right, and one by one), clear solution.
For example, if 1 mL of working solution is to be prepared, you can add 100 μL of 25.0 mg/mL clear DMSO stock solution to 900 μL of corn oil and mix evenly.


 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.7139 mL 18.5694 mL 37.1388 mL
5 mM 0.7428 mL 3.7139 mL 7.4278 mL
10 mM 0.3714 mL 1.8569 mL 3.7139 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
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  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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